| Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
|---|---|
| Accession | NC_010981 |
| Length | 1,482,455 |
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The map label for this gene is engD [H]
Identifier: 190570539
GI number: 190570539
Start: 64043
End: 65137
Strand: Direct
Name: engD [H]
Synonym: WPa_0069
Alternate gene names: 190570539
Gene position: 64043-65137 (Clockwise)
Preceding gene: 190570537
Following gene: 190570542
Centisome position: 4.32
GC content: 36.71
Gene sequence:
>1095_bases ATGAGCTTTAACTGTGGTATAGTTGGGTTACCAAATATAGGAAAATCAACTTTATTTAATGCACTTACAGAGTCAAGTGC AGCTGAAGCTGCAAATTATCCTTTTTGCACAATCGAGCCAAATGTTGGCAAAGTGCCAATACGAGATCAGCGTTTGAAAC AAATTGCCTCGATTGCTCACTCAGGGAAAATAATCTACAATCAACTGGAAGTTGTCGATATTGCCGGCTTGGTTAAGGGT GCGAGCAAGGGTGAAGGACTAGGAAATAAATTTTTGAGTCATATCAGAGAAGTTGATGCCATTGTTCATCTGCTCAGGTG CTTTACGGATGACGATATCAGCCATGTAAACAGTAAAATAGATCCAATATCAGATGCTGAAATAGTGGAAATGGAGTTAA TTCTAGCTGATATTGATAGCATAGAAAAAAGGCTTCCTCAATTGGAAAAGAAAGCAAAGCAAGGTGATAAAGAGCTAAAG AGACAACTTGAATTAATGCAAGAGGTATTAGCTACTTTAAAATTAGGTAAACCGGCAAGAAGCTTGGAGAATATCGATGA AGATAAGATGAAGTTGCTTCAATTGCTAACAACAAAGCCTGTTATGTATGTATGCAATGTTGAAGATACGAATATCATAA CTGGTAATGAACTATCTAAAAGGGTGGAAAAAATGGCGGAAGAAAACAAAAGCAAATTTTATTGTATTTCAGCGAAACTT GAAGCAGATATTGCAAATCTTGATAGTGAAGAGGAAAAACAGAATTTTTTATTAGAATTTGGCTTACAAGAATCAGGACT TGATGGAGTAGCACGTATTATGTATGAAGTGCTAAGTATGATAACTTTTTTTACTGTGGGCCCCAAAGAAGCACGTGCAT GGCCAATAAAGATAGGATCAACAGCTGACAAAGCAGCAGGTGTAATTCACACTGATTTTGAAAAGGGCTTTATAAAAGCA GAAACCATAAGCTTTGAAGACTATATAAAATATGGAAGCGAATTAGCTTGCAAAGATGCAGGGAAAATTCGCTTCGAAGG CAGAGACTATATAGTGCAAGATGGTGATATAATGCACTTTAGGTTCAATGTGTAG
Upstream 100 bases:
>100_bases AGCTATATGTTATTATATTAACTAACTTATTAATAAGTAACTAATTAGGTATAGCAAAAATTTTTTAATTATGCAATAAT TAAGGCTTTAAATAGCAAAT
Downstream 100 bases:
>100_bases TATACATCTAACTCCCAAAGAACCAGGGAATCGAGCCTTTCTTTATGGCTTCCTCTTCGCTGATCCCTGTGGTTGTATAT TCTTCTCTTCCTCACATAAT
Product: GTP-dependent nucleic acid-binding protein EngD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MSFNCGIVGLPNIGKSTLFNALTESSAAEAANYPFCTIEPNVGKVPIRDQRLKQIASIAHSGKIIYNQLEVVDIAGLVKG ASKGEGLGNKFLSHIREVDAIVHLLRCFTDDDISHVNSKIDPISDAEIVEMELILADIDSIEKRLPQLEKKAKQGDKELK RQLELMQEVLATLKLGKPARSLENIDEDKMKLLQLLTTKPVMYVCNVEDTNIITGNELSKRVEKMAEENKSKFYCISAKL EADIANLDSEEEKQNFLLEFGLQESGLDGVARIMYEVLSMITFFTVGPKEARAWPIKIGSTADKAAGVIHTDFEKGFIKA ETISFEDYIKYGSELACKDAGKIRFEGRDYIVQDGDIMHFRFNV
Sequences:
>Translated_364_residues MSFNCGIVGLPNIGKSTLFNALTESSAAEAANYPFCTIEPNVGKVPIRDQRLKQIASIAHSGKIIYNQLEVVDIAGLVKG ASKGEGLGNKFLSHIREVDAIVHLLRCFTDDDISHVNSKIDPISDAEIVEMELILADIDSIEKRLPQLEKKAKQGDKELK RQLELMQEVLATLKLGKPARSLENIDEDKMKLLQLLTTKPVMYVCNVEDTNIITGNELSKRVEKMAEENKSKFYCISAKL EADIANLDSEEEKQNFLLEFGLQESGLDGVARIMYEVLSMITFFTVGPKEARAWPIKIGSTADKAAGVIHTDFEKGFIKA ETISFEDYIKYGSELACKDAGKIRFEGRDYIVQDGDIMHFRFNV >Mature_363_residues SFNCGIVGLPNIGKSTLFNALTESSAAEAANYPFCTIEPNVGKVPIRDQRLKQIASIAHSGKIIYNQLEVVDIAGLVKGA SKGEGLGNKFLSHIREVDAIVHLLRCFTDDDISHVNSKIDPISDAEIVEMELILADIDSIEKRLPQLEKKAKQGDKELKR QLELMQEVLATLKLGKPARSLENIDEDKMKLLQLLTTKPVMYVCNVEDTNIITGNELSKRVEKMAEENKSKFYCISAKLE ADIANLDSEEEKQNFLLEFGLQESGLDGVARIMYEVLSMITFFTVGPKEARAWPIKIGSTADKAAGVIHTDFEKGFIKAE TISFEDYIKYGSELACKDAGKIRFEGRDYIVQDGDIMHFRFNV
Specific function: GTP-dependent nucleic acid-binding protein which may act as a translation factor [H]
COG id: COG0012
COG function: function code J; Predicted GTPase, probable translation factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI58761500, Length=371, Percent_Identity=44.2048517520216, Blast_Score=286, Evalue=2e-77, Organism=Homo sapiens, GI58761502, Length=226, Percent_Identity=38.4955752212389, Blast_Score=139, Evalue=3e-33, Organism=Escherichia coli, GI1787454, Length=366, Percent_Identity=51.9125683060109, Blast_Score=378, Evalue=1e-106, Organism=Escherichia coli, GI1789574, Length=130, Percent_Identity=31.5384615384615, Blast_Score=72, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17509631, Length=368, Percent_Identity=41.304347826087, Blast_Score=274, Evalue=5e-74, Organism=Caenorhabditis elegans, GI17552324, Length=104, Percent_Identity=32.6923076923077, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6319499, Length=375, Percent_Identity=38.4, Blast_Score=237, Evalue=2e-63, Organism=Saccharomyces cerevisiae, GI6321773, Length=379, Percent_Identity=35.8839050131926, Blast_Score=211, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6321649, Length=157, Percent_Identity=35.6687898089172, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI24640873, Length=370, Percent_Identity=42.7027027027027, Blast_Score=276, Evalue=1e-74, Organism=Drosophila melanogaster, GI24640877, Length=370, Percent_Identity=42.7027027027027, Blast_Score=276, Evalue=1e-74, Organism=Drosophila melanogaster, GI24640875, Length=370, Percent_Identity=42.7027027027027, Blast_Score=276, Evalue=1e-74, Organism=Drosophila melanogaster, GI24640879, Length=328, Percent_Identity=40.2439024390244, Blast_Score=221, Evalue=5e-58, Organism=Drosophila melanogaster, GI24585318, Length=170, Percent_Identity=31.1764705882353, Blast_Score=72, Evalue=5e-13,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR004396 - InterPro: IPR013029 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR012676 - InterPro: IPR023192 [H]
Pfam domain/function: PF01926 MMR_HSR1; PF06071 YchF-GTPase_C [H]
EC number: NA
Molecular weight: Translated: 40573; Mature: 40442
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFNCGIVGLPNIGKSTLFNALTESSAAEAANYPFCTIEPNVGKVPIRDQRLKQIASIAH CCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHH SGKIIYNQLEVVDIAGLVKGASKGEGLGNKFLSHIREVDAIVHLLRCFTDDDISHVNSKI CCCEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCC DPISDAEIVEMELILADIDSIEKRLPQLEKKAKQGDKELKRQLELMQEVLATLKLGKPAR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHH SLENIDEDKMKLLQLLTTKPVMYVCNVEDTNIITGNELSKRVEKMAEENKSKFYCISAKL HHHCCCHHHHHHHHHHHCCCEEEEEECCCCCEECCHHHHHHHHHHHHCCCCEEEEEEEEE EADIANLDSEEEKQNFLLEFGLQESGLDGVARIMYEVLSMITFFTVGPKEARAWPIKIGS HHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC TADKAAGVIHTDFEKGFIKAETISFEDYIKYGSELACKDAGKIRFEGRDYIVQDGDIMHF CCHHHCCCEEECCCCCCEEEEEECHHHHHHCCCCEEECCCCCEEECCCEEEEECCCEEEE RFNV EECC >Mature Secondary Structure SFNCGIVGLPNIGKSTLFNALTESSAAEAANYPFCTIEPNVGKVPIRDQRLKQIASIAH CCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHH SGKIIYNQLEVVDIAGLVKGASKGEGLGNKFLSHIREVDAIVHLLRCFTDDDISHVNSKI CCCEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCC DPISDAEIVEMELILADIDSIEKRLPQLEKKAKQGDKELKRQLELMQEVLATLKLGKPAR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHH SLENIDEDKMKLLQLLTTKPVMYVCNVEDTNIITGNELSKRVEKMAEENKSKFYCISAKL HHHCCCHHHHHHHHHHHCCCEEEEEECCCCCEECCHHHHHHHHHHHHCCCCEEEEEEEEE EADIANLDSEEEKQNFLLEFGLQESGLDGVARIMYEVLSMITFFTVGPKEARAWPIKIGS HHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC TADKAAGVIHTDFEKGFIKAETISFEDYIKYGSELACKDAGKIRFEGRDYIVQDGDIMHF CCHHHCCCEEECCCCCCEEEEEECHHHHHHCCCCEEECCCCCEEECCCEEEEECCCEEEE RFNV EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA