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The map label for this gene is 18978395

Identifier: 18978395

GI number: 18978395

Start: 1869772

End: 1870419

Strand: Direct

Name: 18978395

Synonym: PF2023

Alternate gene names: NA

Gene position: 1869772-1870419 (Clockwise)

Preceding gene: 18978388

Following gene: 18978396

Centisome position: 97.98

GC content: 43.83

Gene sequence:

>648_bases
GTGAATAATTGTGAGTGTATGGTAGTAAAAGAGAAACTCTACACGGTAAAGCAGGCAAGTGAGATACTCGGCGTCCACCC
AAAGACAATCCAAAAATGGGACAGAGAAGGGAAAATCAAAACCGTTAGAACACCCGGCGGGAGAAGAAGAATACCAGAAA
GCGAAATAAAAAGACTCCTCGGAATAAGCGAGGAAAAAGGCCTAATCATCGGCTACGCAAGGGTATCAAGCCACACACAA
AAAGACTACTTAGAAAGACAAGTCAAAGCAATAGAGCAATACGCAAAAGAACGTGGGTGGCAAGTCCAAATACTCACGGA
CATCGGCTCAGGATTGAACGAGAACAGGAAAAACTACCGCAAACTCCTCGAACTCGTGGCAAAGAGAGAAGTCTCAAAAG
TCATCATCACCCATCCCGACAGGCTTACACGCTTTGGCTTCAAAACTCTCGAATTCTTCTTCAAGGAGAACGGTGCAGAG
ATAATCATTATCACCGACAAAGAAAAATCCCCACGAGAAGAACTCATTGAAGACTTAACAACCATAATCTCACACTTTGC
TGGGAAACTCTACGGAATGCGCTCCCACAAATACAAAAAGCTCAAAGAAGGCGTAAAAAAACTAATCGAGGAGGTCGAGA
ATGGGTAA

Upstream 100 bases:

>100_bases
CCGTACCAGTGTCAACTAAAACTCTATACCCGTTGTGTTCTACTAGAGCTGAAAAGCCTTTTTTCACTGTTCCTCTTAAC
CGAAAGCTTTAAATATTTTC

Downstream 100 bases:

>100_bases
AATTGTCTTAACATACAGAATGCCCCACAACTGGAACATTAATCCCTTCCTCAAGGAATACCAGAGACTCCTCCAGAGGG
CAATTGACGAAATATGGGAT

Product: DNA invertase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MNNCECMVVKEKLYTVKQASEILGVHPKTIQKWDREGKIKTVRTPGGRRRIPESEIKRLLGISEEKGLIIGYARVSSHTQ
KDYLERQVKAIEQYAKERGWQVQILTDIGSGLNENRKNYRKLLELVAKREVSKVIITHPDRLTRFGFKTLEFFFKENGAE
IIIITDKEKSPREELIEDLTTIISHFAGKLYGMRSHKYKKLKEGVKKLIEEVENG

Sequences:

>Translated_215_residues
MNNCECMVVKEKLYTVKQASEILGVHPKTIQKWDREGKIKTVRTPGGRRRIPESEIKRLLGISEEKGLIIGYARVSSHTQ
KDYLERQVKAIEQYAKERGWQVQILTDIGSGLNENRKNYRKLLELVAKREVSKVIITHPDRLTRFGFKTLEFFFKENGAE
IIIITDKEKSPREELIEDLTTIISHFAGKLYGMRSHKYKKLKEGVKKLIEEVENG
>Mature_215_residues
MNNCECMVVKEKLYTVKQASEILGVHPKTIQKWDREGKIKTVRTPGGRRRIPESEIKRLLGISEEKGLIIGYARVSSHTQ
KDYLERQVKAIEQYAKERGWQVQILTDIGSGLNENRKNYRKLLELVAKREVSKVIITHPDRLTRFGFKTLEFFFKENGAE
IIIITDKEKSPREELIEDLTTIISHFAGKLYGMRSHKYKKLKEGVKKLIEEVENG

Specific function: Unknown

COG id: COG2452

COG function: function code L; Predicted site-specific integrase-resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR006119
- InterPro:   IPR010093 [H]

Pfam domain/function: PF00376 MerR; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 24957; Mature: 24957

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS50937 HTH_MERR_2 ; PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNCECMVVKEKLYTVKQASEILGVHPKTIQKWDREGKIKTVRTPGGRRRIPESEIKRLL
CCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHH
GISEEKGLIIGYARVSSHTQKDYLERQVKAIEQYAKERGWQVQILTDIGSGLNENRKNYR
CCCCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCHHHHH
KLLELVAKREVSKVIITHPDRLTRFGFKTLEFFFKENGAEIIIITDKEKSPREELIEDLT
HHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHH
TIISHFAGKLYGMRSHKYKKLKEGVKKLIEEVENG
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNNCECMVVKEKLYTVKQASEILGVHPKTIQKWDREGKIKTVRTPGGRRRIPESEIKRLL
CCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHH
GISEEKGLIIGYARVSSHTQKDYLERQVKAIEQYAKERGWQVQILTDIGSGLNENRKNYR
CCCCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCHHHHH
KLLELVAKREVSKVIITHPDRLTRFGFKTLEFFFKENGAEIIIITDKEKSPREELIEDLT
HHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHH
TIISHFAGKLYGMRSHKYKKLKEGVKKLIEEVENG
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]