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The map label for this gene is rpoP [H]

Identifier: 18978381

GI number: 18978381

Start: 1857791

End: 1857940

Strand: Direct

Name: rpoP [H]

Synonym: PF2009

Alternate gene names: 18978381

Gene position: 1857791-1857940 (Clockwise)

Preceding gene: 18978380

Following gene: 18978382

Centisome position: 97.36

GC content: 44.0

Gene sequence:

>150_bases
ATGGTTGAGGCCGTGTATAGATGTTTTAAGTGTGGTAGGGAGGTTAAGCTAGACCTTTCCATAACAAGGGATCTCCGTTG
TCCATATTGTGGTAGCAAGATTCTATACAAGCCAAGACCCAAGGTTCCAAGAAGGGTAAAGGCCATTTAG

Upstream 100 bases:

>100_bases
TGGCAGTGCCAGAAGTGTGGAGCTACATTTGCCGGTGGAGCTTACCTCCCAGTTACCCCTGCCGGAAAGGCCGTTAGAAG
GATAACGGAGTGAATGTAAT

Downstream 100 bases:

>100_bases
CTAACATTTTTAACCTTTTCTTTTAAACTTCCTAAGGGTAGCACCTATGATGCTGATAACTACTTCACATAGGCCTACCA
GAAGAACTAGAAGTTTTGGT

Product: DNA-directed RNA polymerase subunit P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 49; Mature: 49

Protein sequence:

>49_residues
MVEAVYRCFKCGREVKLDLSITRDLRCPYCGSKILYKPRPKVPRRVKAI

Sequences:

>Translated_49_residues
MVEAVYRCFKCGREVKLDLSITRDLRCPYCGSKILYKPRPKVPRRVKAI
>Mature_49_residues
MVEAVYRCFKCGREVKLDLSITRDLRCPYCGSKILYKPRPKVPRRVKAI

Specific function: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates [H]

COG id: COG1996

COG function: function code K; DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal rpoP/eukaryotic RPC10 RNA polymerase subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006591 [H]

Pfam domain/function: PF03604 DNA_RNApol_7kD [H]

EC number: =2.7.7.6 [H]

Molecular weight: Translated: 5757; Mature: 5757

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
8.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEAVYRCFKCGREVKLDLSITRDLRCPYCGSKILYKPRPKVPRRVKAI
CHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCC
>Mature Secondary Structure
MVEAVYRCFKCGREVKLDLSITRDLRCPYCGSKILYKPRPKVPRRVKAI
CHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]