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The map label for this gene is 18978336

Identifier: 18978336

GI number: 18978336

Start: 1814247

End: 1814429

Strand: Direct

Name: 18978336

Synonym: PF1964

Alternate gene names: NA

Gene position: 1814247-1814429 (Clockwise)

Preceding gene: 18978333

Following gene: 18978337

Centisome position: 95.07

GC content: 48.09

Gene sequence:

>183_bases
ATGGTTGAGATGAAGTTTGAGATACCAGTATGTACCTCATGTGGAAGGGAGATAACACCCAGGGAGCACGCTACTCACTT
TATCTGTCCAAACTGCGGTGAGGCAGTAATATGGAGATGTGAAAGCTGTAGGGTTTTAGCAAAGCCCTATAAGTGCCCCA
ATTGCGGATGGGAGGGACCCTGA

Upstream 100 bases:

>100_bases
CTCTTGCTCGCCCATCTAAATATAGGAAAAGTTTTATAAATAACATCCCTAACCCGATTAGCAGTTAGAGAAAAAACCTC
TACTTCTGGAGGTGTAGGGA

Downstream 100 bases:

>100_bases
ATGGGCGACTTTAATTTGGTTGGTGTAATTAGAGTGATGCCAACAGATCCCGAAGTGAACTTGGATGAGCTTGAGGAAAA
GTTGAAGGCACTAATTCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 60

Protein sequence:

>60_residues
MVEMKFEIPVCTSCGREITPREHATHFICPNCGEAVIWRCESCRVLAKPYKCPNCGWEGP

Sequences:

>Translated_60_residues
MVEMKFEIPVCTSCGREITPREHATHFICPNCGEAVIWRCESCRVLAKPYKCPNCGWEGP
>Mature_60_residues
MVEMKFEIPVCTSCGREITPREHATHFICPNCGEAVIWRCESCRVLAKPYKCPNCGWEGP

Specific function: Unknown

COG id: COG2888

COG function: function code J; Predicted Zn-ribbon RNA-binding protein with a function in translation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011668 [H]

Pfam domain/function: PF07754 DUF1610 [H]

EC number: NA

Molecular weight: Translated: 6815; Mature: 6815

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

13.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
16.7 %Cys+Met (Translated Protein)
13.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
16.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEMKFEIPVCTSCGREITPREHATHFICPNCGEAVIWRCESCRVLAKPYKCPNCGWEGP
CCEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MVEMKFEIPVCTSCGREITPREHATHFICPNCGEAVIWRCESCRVLAKPYKCPNCGWEGP
CCEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]