| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is 18978300
Identifier: 18978300
GI number: 18978300
Start: 1778285
End: 1779061
Strand: Direct
Name: 18978300
Synonym: PF1928
Alternate gene names: NA
Gene position: 1778285-1779061 (Clockwise)
Preceding gene: 18978297
Following gene: 18978302
Centisome position: 93.19
GC content: 39.51
Gene sequence:
>777_bases ATGAAGGTTGTGATATTGGGCTCAGGTTCATACAGTGGGACACCAAAGCCATTGTGTAACTGTGAGAATTGTAGCATTGC AAGGAGAAATCCAGCCTTTAGAAGGACAAGATTTTCTCTCTACATAGAAGAGGGAAAAATACTAGTGGACCCAAGTCCAG ACCTTCATTATCACCTAGAGCGCTTAAACAAAAAAGTAGAGAATGTGTTTATAACCCACGCTCATTTTGATCACATATTT GGAGTACCAGATCTTCAAGTTTACAAAAAACTTATTATTTCGTCAAATACACTTGGCATAAAAGTTGCAAAGGAACTCTC TAGGCTTGCCTTTGGAAGTGAAGTCCCTTCTGGCTATGAGTGGAGGTATGAGGAGCTTCAATTTTGGAATGAATATTCAT TTGACAACTTTAGGGTAATTCACTTCCCAGTTATTCACTCTCTCGAAATTGCTGGGGGTTATCTCTTTGAAATCAAGGGA AGGAGAATAGGGGTTACAGGGGATACAGGGCCAGAGATACTGAAAGATGAAAAAGTTAAAAAGCTACTAGAGGGAGTTGA TATCCTTATAGTTGAGATGACAAAGAGAGAGTCAATTCCAGGAGTCCACCTTGGAGTTTCAGACTCCATAGAATTTGCAA AAGTTGTTGGAGCAAGTTATACTGTCTTTGCTCACATAAGTCATACTAACTATTCACATGAAGTTCTAGAAAAGAGAGTT CGAGAATCAGGAGTACAGGGAGAAGTTGCAAGGGACTTTACAATCATTGAGGTGTGA
Upstream 100 bases:
>100_bases CCTCACTTCCACACTCAGGACAAACATAATACTCCTCCATTTTGCTCACCTTAAAAAAGGCTAATTAATTAAGTTAAGAA CTTTTGCATGGTGAGGAAAA
Downstream 100 bases:
>100_bases TCAGCCCCTAAGGTCTTCATCATCCTCTCAGCAATCCGCCTTTTCATCACACCAGTAGGAGGAACAGCGCCATTCCCAAT AGTCCTCCTAAGAGAGTTGC
Product: ATP-binding protein phnp
Products: NA
Alternate protein names: Lipoate-Protein Ligase B; Beta-Lactamase Domain-Containing Protein; Metal-Dependent Hydrolase; Hydrolase; Beta-Lactamase-Like; PhnP Protein; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase Superfamily Metal Dependent Hydrolase; Beta-Lactamase Superfamily Metal-Dependent Hydrolase; Metal-Dependent Hydrolase Of Beta-Lactamase Superfamily; Phosphonate Metabolism
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MKVVILGSGSYSGTPKPLCNCENCSIARRNPAFRRTRFSLYIEEGKILVDPSPDLHYHLERLNKKVENVFITHAHFDHIF GVPDLQVYKKLIISSNTLGIKVAKELSRLAFGSEVPSGYEWRYEELQFWNEYSFDNFRVIHFPVIHSLEIAGGYLFEIKG RRIGVTGDTGPEILKDEKVKKLLEGVDILIVEMTKRESIPGVHLGVSDSIEFAKVVGASYTVFAHISHTNYSHEVLEKRV RESGVQGEVARDFTIIEV
Sequences:
>Translated_258_residues MKVVILGSGSYSGTPKPLCNCENCSIARRNPAFRRTRFSLYIEEGKILVDPSPDLHYHLERLNKKVENVFITHAHFDHIF GVPDLQVYKKLIISSNTLGIKVAKELSRLAFGSEVPSGYEWRYEELQFWNEYSFDNFRVIHFPVIHSLEIAGGYLFEIKG RRIGVTGDTGPEILKDEKVKKLLEGVDILIVEMTKRESIPGVHLGVSDSIEFAKVVGASYTVFAHISHTNYSHEVLEKRV RESGVQGEVARDFTIIEV >Mature_258_residues MKVVILGSGSYSGTPKPLCNCENCSIARRNPAFRRTRFSLYIEEGKILVDPSPDLHYHLERLNKKVENVFITHAHFDHIF GVPDLQVYKKLIISSNTLGIKVAKELSRLAFGSEVPSGYEWRYEELQFWNEYSFDNFRVIHFPVIHSLEIAGGYLFEIKG RRIGVTGDTGPEILKDEKVKKLLEGVDILIVEMTKRESIPGVHLGVSDSIEFAKVVGASYTVFAHISHTNYSHEVLEKRV RESGVQGEVARDFTIIEV
Specific function: Unknown
COG id: COG1235
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29266; Mature: 29266
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVVILGSGSYSGTPKPLCNCENCSIARRNPAFRRTRFSLYIEEGKILVDPSPDLHYHLE CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEEEEECCEEEECCCCCHHHHHH RLNKKVENVFITHAHFDHIFGVPDLQVYKKLIISSNTLGIKVAKELSRLAFGSEVPSGYE HHHHHHHHEEEEEEHHHHHCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCCC WRYEELQFWNEYSFDNFRVIHFPVIHSLEIAGGYLFEIKGRRIGVTGDTGPEILKDEKVK CCHHHHHHHCCCCCCCEEEEEEECEEEEEECCCEEEEECCCEEEECCCCCHHHHHHHHHH KLLEGVDILIVEMTKRESIPGVHLGVSDSIEFAKVVGASYTVFAHISHTNYSHEVLEKRV HHHCCCEEEEEEEECCCCCCEEEECCCCCHHHHHHHCCCEEEEEEEECCCCHHHHHHHHH RESGVQGEVARDFTIIEV HHCCCCCCCCCCEEEEEC >Mature Secondary Structure MKVVILGSGSYSGTPKPLCNCENCSIARRNPAFRRTRFSLYIEEGKILVDPSPDLHYHLE CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEEEEECCEEEECCCCCHHHHHH RLNKKVENVFITHAHFDHIFGVPDLQVYKKLIISSNTLGIKVAKELSRLAFGSEVPSGYE HHHHHHHHEEEEEEHHHHHCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCCC WRYEELQFWNEYSFDNFRVIHFPVIHSLEIAGGYLFEIKGRRIGVTGDTGPEILKDEKVK CCHHHHHHHCCCCCCCEEEEEEECEEEEEECCCEEEEECCCEEEECCCCCHHHHHHHHHH KLLEGVDILIVEMTKRESIPGVHLGVSDSIEFAKVVGASYTVFAHISHTNYSHEVLEKRV HHHCCCEEEEEEEECCCCCCEEEECCCCCHHHHHHHCCCEEEEEEEECCCCHHHHHHHHH RESGVQGEVARDFTIIEV HHCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA