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The map label for this gene is 18978299

Identifier: 18978299

GI number: 18978299

Start: 1777604

End: 1778224

Strand: Reverse

Name: 18978299

Synonym: PF1927

Alternate gene names: NA

Gene position: 1778224-1777604 (Counterclockwise)

Preceding gene: 18978301

Following gene: 18978298

Centisome position: 93.19

GC content: 43.32

Gene sequence:

>621_bases
ATGGAGGAGTATTATGTTTGTCCTGAGTGTGGAAGTGAGGATGTAGAGGTCATTAAAGAGAGGGGGAGAGAGGTGACTCT
AAGGTGCAACGAATGCGGTTACGTATGGATGATCACACTCCCAAAATTGAGGGAGATTCCAGTAATAGTTAGCAAACATG
AGAGAAGCTTCAGGGAGAAGGCTGTGCTCCCTGAGGATGAGGTAATAAAGGTAGGAGATGTTATTGAGATAGAAAACGAC
CAAGTGAAAGTACTTAGCATAGAGCTTCCAGGAGGAAAAAGAGTGAGAAAGGCCAAAGTAGCAGAGATACAGACAATTTG
GGGCGAGAGCTTAACATACCCAAAGGTCTTCGGAGTGTCAATATATCTCCCAGGAGGAATAACTCAGTCATTTAAGGTAG
TTGTGGATAGAGAGGAAGAATTCGTGGTGGGAGAAGTAATAGAAGTTGGAGGTTACACCTTCAAAGTTGAGATGATAAAG
ACAGAGAAGAAGCTCATGAGGAGTGGCAAGGCCAAGGCCGAAAACATAGTAAGGCTAATGGGTCATGCAATAAAAGGTAG
AGCGAGAAGAAAGCTCAAAATCTATGAGGGCTATGATTCGATATCTGCTGAGAATCAGTAA

Upstream 100 bases:

>100_bases
TCCCACTGTATGAACCTGAGCCCAATATCACAACCTTCATTTTTCCTCACCATGCAAAAGTTCTTAACTTAATTAATTAG
CCTTTTTTAAGGTGAGCAAA

Downstream 100 bases:

>100_bases
TTTTATTTCTGCATTTTCTAGAAAAAACGTTTTTAGGAAATATTTCTCAAAATCTTTCCCTTTAAAAACCCTTAGTAAAA
TATATAACTCCCTCAGTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MEEYYVCPECGSEDVEVIKERGREVTLRCNECGYVWMITLPKLREIPVIVSKHERSFREKAVLPEDEVIKVGDVIEIEND
QVKVLSIELPGGKRVRKAKVAEIQTIWGESLTYPKVFGVSIYLPGGITQSFKVVVDREEEFVVGEVIEVGGYTFKVEMIK
TEKKLMRSGKAKAENIVRLMGHAIKGRARRKLKIYEGYDSISAENQ

Sequences:

>Translated_206_residues
MEEYYVCPECGSEDVEVIKERGREVTLRCNECGYVWMITLPKLREIPVIVSKHERSFREKAVLPEDEVIKVGDVIEIEND
QVKVLSIELPGGKRVRKAKVAEIQTIWGESLTYPKVFGVSIYLPGGITQSFKVVVDREEEFVVGEVIEVGGYTFKVEMIK
TEKKLMRSGKAKAENIVRLMGHAIKGRARRKLKIYEGYDSISAENQ
>Mature_206_residues
MEEYYVCPECGSEDVEVIKERGREVTLRCNECGYVWMITLPKLREIPVIVSKHERSFREKAVLPEDEVIKVGDVIEIEND
QVKVLSIELPGGKRVRKAKVAEIQTIWGESLTYPKVFGVSIYLPGGITQSFKVVVDREEEFVVGEVIEVGGYTFKVEMIK
TEKKLMRSGKAKAENIVRLMGHAIKGRARRKLKIYEGYDSISAENQ

Specific function: Unknown

COG id: COG1326

COG function: function code R; Uncharacterized archaeal Zn-finger protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012041
- InterPro:   IPR007853 [H]

Pfam domain/function: PF05180 zf-DNL [H]

EC number: NA

Molecular weight: Translated: 23456; Mature: 23456

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEYYVCPECGSEDVEVIKERGREVTLRCNECGYVWMITLPKLREIPVIVSKHERSFREK
CCCEEECCCCCCHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCEEEECHHHHHHHH
AVLPEDEVIKVGDVIEIENDQVKVLSIELPGGKRVRKAKVAEIQTIWGESLTYPKVFGVS
CCCCCCCEEEECCEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEE
IYLPGGITQSFKVVVDREEEFVVGEVIEVGGYTFKVEMIKTEKKLMRSGKAKAENIVRLM
EEECCCCCCEEEEEEECCCCEEEEEHEECCCEEEEEEEEHHHHHHHHCCCCHHHHHHHHH
GHAIKGRARRKLKIYEGYDSISAENQ
HHHHCCCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MEEYYVCPECGSEDVEVIKERGREVTLRCNECGYVWMITLPKLREIPVIVSKHERSFREK
CCCEEECCCCCCHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCEEEECHHHHHHHH
AVLPEDEVIKVGDVIEIENDQVKVLSIELPGGKRVRKAKVAEIQTIWGESLTYPKVFGVS
CCCCCCCEEEECCEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEE
IYLPGGITQSFKVVVDREEEFVVGEVIEVGGYTFKVEMIKTEKKLMRSGKAKAENIVRLM
EEECCCCCCEEEEEEECCCCEEEEEHEECCCEEEEEEEEHHHHHHHHCCCCHHHHHHHHH
GHAIKGRARRKLKIYEGYDSISAENQ
HHHHCCCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]