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The map label for this gene is 18978295

Identifier: 18978295

GI number: 18978295

Start: 1773331

End: 1774107

Strand: Direct

Name: 18978295

Synonym: PF1923

Alternate gene names: NA

Gene position: 1773331-1774107 (Clockwise)

Preceding gene: 18978291

Following gene: 18978296

Centisome position: 92.93

GC content: 37.71

Gene sequence:

>777_bases
GTGTTTGCCCTTATCTCCTTTATCCTTGTAGTCGTGCTTTCGATAATCATTGTCAGGATTGGAGCAATAGCCCTTGAAAT
GACTGGCTTATCTAGAGATGTAGCTGCTTTTCAGGCTCAATCTGCCTACTCTGGCACAGGCTTTACAACTAGCGAAAGTG
AATACGTAGTTTCCCATCCAGTGAGGAGAAGAATAATTAGAATCCTGATATTTTTGGGAAGCGCAGGAATAACATCAGCG
ATAGCCACATTAATACTTACTTTTGTTGGAAAGAGTAAGAGTGAGGCATTAACTTCATTGGGAATTCTTGTAATAAGTCT
TGTTTTCCTTTACTTCTTCTTCACCTCAAAAAGAGTTGAGAGATGGATGAGAAGAGTCATAAAGAAATTTCTCGAAAAAC
AATTCCCAGAACTTAAGGTTTACGACTATAATCAGTTGTTAGGACTCTCTAGAGGTTACTCAATCTCTAGAATCCAGGTA
AAGGAAAACAGTTGGCTGGCAAATAAAACATTACGGAAAGTTGAACTCGACAAAGAGGGAATCCTTGTACTTGGAATATA
TAGAAAAACGAAAAATGGGGAAATCTATATTGGCGCTCCAACTGGAATCACAAAGATACTTCCAGGAGATGTTCTCATAT
GTTATGGACCAGAAGACTCATTACTTAGACTTTCAATGCGTGTGAAAGGTATCAAAGGCGATATAGAGCATAAAGAAGCT
ATTAAGGAAGCACAACTCAGGAAAATTAAGGAGAAAATGGAAATAGAAAATCAATAA

Upstream 100 bases:

>100_bases
ATCTGAAGAGTATAAATGCATTACTATATTCTTTGTTTGTTCCAAAATAATCTTTATAAATTCCAGCAGAAAAGGTACAA
TTCTGACAGGTGCCATAAAA

Downstream 100 bases:

>100_bases
CCCACAATAAAAGGCTAAAAATGCAAAGCTTAAAAGATTCAACTTGGGTGTAACTATGAAGGCACCAGATTTGGGAATTA
GGATAGGCGTTTTTGAGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: TrkA-C Domain-Containing Protein; TrkA Domain-Containing Protein

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MFALISFILVVVLSIIIVRIGAIALEMTGLSRDVAAFQAQSAYSGTGFTTSESEYVVSHPVRRRIIRILIFLGSAGITSA
IATLILTFVGKSKSEALTSLGILVISLVFLYFFFTSKRVERWMRRVIKKFLEKQFPELKVYDYNQLLGLSRGYSISRIQV
KENSWLANKTLRKVELDKEGILVLGIYRKTKNGEIYIGAPTGITKILPGDVLICYGPEDSLLRLSMRVKGIKGDIEHKEA
IKEAQLRKIKEKMEIENQ

Sequences:

>Translated_258_residues
MFALISFILVVVLSIIIVRIGAIALEMTGLSRDVAAFQAQSAYSGTGFTTSESEYVVSHPVRRRIIRILIFLGSAGITSA
IATLILTFVGKSKSEALTSLGILVISLVFLYFFFTSKRVERWMRRVIKKFLEKQFPELKVYDYNQLLGLSRGYSISRIQV
KENSWLANKTLRKVELDKEGILVLGIYRKTKNGEIYIGAPTGITKILPGDVLICYGPEDSLLRLSMRVKGIKGDIEHKEA
IKEAQLRKIKEKMEIENQ
>Mature_258_residues
MFALISFILVVVLSIIIVRIGAIALEMTGLSRDVAAFQAQSAYSGTGFTTSESEYVVSHPVRRRIIRILIFLGSAGITSA
IATLILTFVGKSKSEALTSLGILVISLVFLYFFFTSKRVERWMRRVIKKFLEKQFPELKVYDYNQLLGLSRGYSISRIQV
KENSWLANKTLRKVELDKEGILVLGIYRKTKNGEIYIGAPTGITKILPGDVLICYGPEDSLLRLSMRVKGIKGDIEHKEA
IKEAQLRKIKEKMEIENQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29053; Mature: 29053

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFALISFILVVVLSIIIVRIGAIALEMTGLSRDVAAFQAQSAYSGTGFTTSESEYVVSHP
CHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
VRRRIIRILIFLGSAGITSAIATLILTFVGKSKSEALTSLGILVISLVFLYFFFTSKRVE
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWMRRVIKKFLEKQFPELKVYDYNQLLGLSRGYSISRIQVKENSWLANKTLRKVELDKEG
HHHHHHHHHHHHHHCCCEEEECHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHEECCCC
ILVLGIYRKTKNGEIYIGAPTGITKILPGDVLICYGPEDSLLRLSMRVKGIKGDIEHKEA
EEEEEEEEECCCCEEEEECCCCCCEECCCCEEEEECCCCHHEEHHHHHCCCCCCCHHHHH
IKEAQLRKIKEKMEIENQ
HHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFALISFILVVVLSIIIVRIGAIALEMTGLSRDVAAFQAQSAYSGTGFTTSESEYVVSHP
CHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
VRRRIIRILIFLGSAGITSAIATLILTFVGKSKSEALTSLGILVISLVFLYFFFTSKRVE
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWMRRVIKKFLEKQFPELKVYDYNQLLGLSRGYSISRIQVKENSWLANKTLRKVELDKEG
HHHHHHHHHHHHHHCCCEEEECHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHEECCCC
ILVLGIYRKTKNGEIYIGAPTGITKILPGDVLICYGPEDSLLRLSMRVKGIKGDIEHKEA
EEEEEEEEECCCCEEEEECCCCCCEECCCCEEEEECCCCHHEEHHHHHCCCCCCCHHHHH
IKEAQLRKIKEKMEIENQ
HHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA