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The map label for this gene is 18978234

Identifier: 18978234

GI number: 18978234

Start: 1718792

End: 1719409

Strand: Direct

Name: 18978234

Synonym: PF1862

Alternate gene names: NA

Gene position: 1718792-1719409 (Clockwise)

Preceding gene: 18978230

Following gene: 18978235

Centisome position: 90.07

GC content: 36.73

Gene sequence:

>618_bases
ATGGATTATCACAGAAGACATCCGTATCATCATAGCATAAAGAAGAAAATGAATGTTGAGTATGAAGAATATGCATATGT
ATTAGACTATCTTCCAAATGGTTATCCTGATCTAAGAACAGGCCACTATCTTGGAAAACCTGTAGCTCAGGTGATAGGAG
AAAAAGCATTCACATTGCTAGAAGTTACCCCCAAAGTTGACCTAATGTTGTATGAGAGGGTGTATGTGGGAAAGGGGGAG
AGAGACAAAGTACTAAAAATTAACAAAAAGCTAACATACGATGAACTAACAGACACTGCAAAAGCCGAACTCCCTTATGT
CCTGGAAGAAATTGTTAAGAACAATGAAGATAGATTTGTAAAGTTCTTCAACATAGCTCCTCCAATAACAAACAGGTTGC
ACAGTTTGGAGCTCCTCCCAGGAATAGGAAAAAAGCATATGTGGGAAATCATTGAGGAAAGAGAAAAAAAGCCATTTGAA
AGCTTTGAAGATCTTAAAAAGAGAGTAAAAGGACTTCCAGATCCAGTAAAGATGATTGCAAAAAGAATATTAGAAGAGCT
GCAAGGAAAAGACAAATACCGACTATTTGTAGGGAGTAATAGAATATTCCGTGAATAG

Upstream 100 bases:

>100_bases
GAAAATAAAAATGGTACAATGTACAACTTATTAGAACAAAGAGTATACCAAATGATAAAAGTATTAAACTCCTCTACTAT
AAAAAGAGGGGGGATGAATA

Downstream 100 bases:

>100_bases
ACATGAGAGACAAACTTTTCTATTTCCTCTCCAAATACAATTTTTCTCCTAGAGACAAAATAGGCCAGAATTTCCTAATC
ATGAGAGATGTTATCATAAA

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MDYHRRHPYHHSIKKKMNVEYEEYAYVLDYLPNGYPDLRTGHYLGKPVAQVIGEKAFTLLEVTPKVDLMLYERVYVGKGE
RDKVLKINKKLTYDELTDTAKAELPYVLEEIVKNNEDRFVKFFNIAPPITNRLHSLELLPGIGKKHMWEIIEEREKKPFE
SFEDLKKRVKGLPDPVKMIAKRILEELQGKDKYRLFVGSNRIFRE

Sequences:

>Translated_205_residues
MDYHRRHPYHHSIKKKMNVEYEEYAYVLDYLPNGYPDLRTGHYLGKPVAQVIGEKAFTLLEVTPKVDLMLYERVYVGKGE
RDKVLKINKKLTYDELTDTAKAELPYVLEEIVKNNEDRFVKFFNIAPPITNRLHSLELLPGIGKKHMWEIIEEREKKPFE
SFEDLKKRVKGLPDPVKMIAKRILEELQGKDKYRLFVGSNRIFRE
>Mature_205_residues
MDYHRRHPYHHSIKKKMNVEYEEYAYVLDYLPNGYPDLRTGHYLGKPVAQVIGEKAFTLLEVTPKVDLMLYERVYVGKGE
RDKVLKINKKLTYDELTDTAKAELPYVLEEIVKNNEDRFVKFFNIAPPITNRLHSLELLPGIGKKHMWEIIEEREKKPFE
SFEDLKKRVKGLPDPVKMIAKRILEELQGKDKYRLFVGSNRIFRE

Specific function: Unknown

COG id: COG1491

COG function: function code J; Predicted RNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007003
- InterPro:   IPR012340 [H]

Pfam domain/function: PF04919 DUF655 [H]

EC number: NA

Molecular weight: Translated: 24311; Mature: 24311

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYHRRHPYHHSIKKKMNVEYEEYAYVLDYLPNGYPDLRTGHYLGKPVAQVIGEKAFTLL
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHE
EVTPKVDLMLYERVYVGKGERDKVLKINKKLTYDELTDTAKAELPYVLEEIVKNNEDRFV
EECCCHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCEE
KFFNIAPPITNRLHSLELLPGIGKKHMWEIIEEREKKPFESFEDLKKRVKGLPDPVKMIA
EEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHH
KRILEELQGKDKYRLFVGSNRIFRE
HHHHHHHCCCCCEEEEECCCHHCCC
>Mature Secondary Structure
MDYHRRHPYHHSIKKKMNVEYEEYAYVLDYLPNGYPDLRTGHYLGKPVAQVIGEKAFTLL
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHE
EVTPKVDLMLYERVYVGKGERDKVLKINKKLTYDELTDTAKAELPYVLEEIVKNNEDRFV
EECCCHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCEE
KFFNIAPPITNRLHSLELLPGIGKKHMWEIIEEREKKPFESFEDLKKRVKGLPDPVKMIA
EEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHH
KRILEELQGKDKYRLFVGSNRIFRE
HHHHHHHCCCCCEEEEECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]