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The map label for this gene is 18978213

Identifier: 18978213

GI number: 18978213

Start: 1696784

End: 1697155

Strand: Reverse

Name: 18978213

Synonym: PF1841

Alternate gene names: NA

Gene position: 1697155-1696784 (Counterclockwise)

Preceding gene: 18978214

Following gene: 18978210

Centisome position: 88.94

GC content: 37.37

Gene sequence:

>372_bases
ATGAGGGAAATTGGAAAAAAGTACATTTTGGCTATTTCCTTTATATTTTTGATAGGGATAAGCATTTCATTAGCTGAGTA
TTATTCTCTGCCAATGGCAGTAGCTTTAGCCTTAGTGAGCACTGTTCTAGCTATTTTAGTCCCTTGGGTCATCATTTCTA
CAGTTTCAAAAAAGGAATTTAGGTATTCTACCGTTTCAGCGTTTTTGCTAGCATCTCTCTGGGAGTTTTTCTGCTCTTAC
TTAACCCGAATGTTGAGCTATCCACTTTGGAAGTTCTTCTTTAATGCTGGGATAGGTGGAATCGTTGTTACGGCTATTAT
TGCGATAGGGAGCATGATAAAAGCTAAGGATATTTCAGCTGAAGTAAAATAG

Upstream 100 bases:

>100_bases
GCCTTGGAATGTTATGTGGTGAGAGCTGTTGTACCGAAAAAGGGAGCAAATGCGAGTCTATTTTTCCTGAACCAAGACCT
TAGGATGTGGAGGTGTTAAT

Downstream 100 bases:

>100_bases
AGCTCTCTCCCATCTTTTTGCGGGTCTAAAAGTTAAGGCTAACAAAGGCTCATGAGTACCAATGTAAAGAACCTTCTTCT
CCTTATTTATGTAAAAATAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MREIGKKYILAISFIFLIGISISLAEYYSLPMAVALALVSTVLAILVPWVIISTVSKKEFRYSTVSAFLLASLWEFFCSY
LTRMLSYPLWKFFFNAGIGGIVVTAIIAIGSMIKAKDISAEVK

Sequences:

>Translated_123_residues
MREIGKKYILAISFIFLIGISISLAEYYSLPMAVALALVSTVLAILVPWVIISTVSKKEFRYSTVSAFLLASLWEFFCSY
LTRMLSYPLWKFFFNAGIGGIVVTAIIAIGSMIKAKDISAEVK
>Mature_123_residues
MREIGKKYILAISFIFLIGISISLAEYYSLPMAVALALVSTVLAILVPWVIISTVSKKEFRYSTVSAFLLASLWEFFCSY
LTRMLSYPLWKFFFNAGIGGIVVTAIIAIGSMIKAKDISAEVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13659; Mature: 13659

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREIGKKYILAISFIFLIGISISLAEYYSLPMAVALALVSTVLAILVPWVIISTVSKKEF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYSTVSAFLLASLWEFFCSYLTRMLSYPLWKFFFNAGIGGIVVTAIIAIGSMIKAKDISA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
EVK
CCC
>Mature Secondary Structure
MREIGKKYILAISFIFLIGISISLAEYYSLPMAVALALVSTVLAILVPWVIISTVSKKEF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYSTVSAFLLASLWEFFCSYLTRMLSYPLWKFFFNAGIGGIVVTAIIAIGSMIKAKDISA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
EVK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA