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The map label for this gene is yfiQ [C]

Identifier: 18978210

GI number: 18978210

Start: 1693216

End: 1694637

Strand: Reverse

Name: yfiQ [C]

Synonym: PF1838

Alternate gene names: 18978210

Gene position: 1694637-1693216 (Counterclockwise)

Preceding gene: 18978213

Following gene: 18978209

Centisome position: 88.81

GC content: 41.84

Gene sequence:

>1422_bases
ATGATTAACAACTTGGACATTAAAGAACAACTAAGGTCATTTTTTGATCCCAAGGCTGTAGCGATTATTGGAGCAACAAA
CAAGAAAGGAAAAGTTGGGAATGTTATTTTTGAGAATTTCAAGAGAAACAAGGAGAGAGGAATATTCAAGGGCAACATAT
ACCCAGTTAACCCCAAACTTGACGAAATTGATGGATACAAGGTTTATCATAGTGTCGAAGAACTTCCAGACGACACTGAT
TTAGCTGTTGTAGCAATTCCGGCCCCTGCAGTCCCAGAAACCATGAGAAAAATTGCAGAAAAGGGAATAAAGGCCGTTGT
AATAATTACAGGAGGATTTGGTGAGCTCGGGGAAGAAGGTAAAAGAATGGAGCAAGAGATACTGGAAATAGCAAGAGCTC
ATGGAATTAGGGTGATAGGGCCCAACTGTGTAGGTGTTTATGTTCCCGATACTGGCGTTGATACAGTTTTCTTACCAGAA
GAAAAGATGGACAGACCGAAGAGTGGTCCAATAGCATTTGTTAGCCAAAGTGGTGCATTCGCTGCAGCAATGCTTGACTG
GGCAGCGATGGCGGGCATTGGGATTGGAAAAATGGTTAGTTATGGAAACAAAATAGATGTAGATGATGCTGACCTCATGG
AATACTTTGCCCAGGATGAACAGATTAAAGTGATGACATTTTACATTGAAGGAGTCAAAGATGGTAGGAGATTCATGGAA
GTTGCCAAAAGAGTAACAAAGATAAAGCCAATAATTGCCTTAAAGAGTGGAAGAACAGAGTATGGAGCAAAAGCTGCTTC
GTCTCACACTGGAAGCTTAGCGGGTCAAGATGTCATATACGACGCAGTTTTCAAGCAGACAGGTATAATAAGGGCTGAAG
ACTTTGAACACATGTTTGATTTGGCAAAAGCTTTTGCAAAATGTAAGTTGCCAAAGGGAGACAGAATTGGAATCATTACA
GATGGTGGTGGAGCTGGAGTAATGGCTAGTGATGCCGTTGCAAAGTTTGGCTTAAAATTAGCTGAGTTGAGTGAAGAGAC
CCTAAGATTCCTAAGGGAAAAGTTCCCACCTCATGCAGTTGTTGGAAATCCAACTGATGTCGTTGGAGACACTGATGCAG
AAAGATACAGGTTAGCTCTAGAGGCTTTCACAAAGGATCCAAACGTTGATGCAATTCTCGTCATAGTCCTCTTCCAGGTT
CCATTACTGGATGAAGAGGAAGTCATTGAAATCATTGCAGACTATGCGAAGAAGAGTGATAAACCGATAGTTGCTGTATC
AATGGGAGGTTACAAGACAGACAGATATGCTAAAATGTTGGAGGAAAAAGGAGTTCCTGTTTATCCAACCCCTGAGAGGG
GTGTTAGAGCTCTCGCTGGGTTAGTTAGATATGCTGAATATTTGAGGAAGATGGGGGAATGA

Upstream 100 bases:

>100_bases
CCTTTCGTTTATAATCATTTTATACACATAAAACTTTTAATCTGCTCTTTTGAGATACTTTTTGGAAATTTATGGAAAAT
TTCATGAAGGAGGGGAGATT

Downstream 100 bases:

>100_bases
AAGATGAAGGGGGAGGCCCTTAAGATAATAGAGGAAGTGTTGGCACAAGGAAGGACGGCGATGGTTGAATATGAAGCTAA
GCAAGTTTTAAAAGCTTACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MINNLDIKEQLRSFFDPKAVAIIGATNKKGKVGNVIFENFKRNKERGIFKGNIYPVNPKLDEIDGYKVYHSVEELPDDTD
LAVVAIPAPAVPETMRKIAEKGIKAVVIITGGFGELGEEGKRMEQEILEIARAHGIRVIGPNCVGVYVPDTGVDTVFLPE
EKMDRPKSGPIAFVSQSGAFAAAMLDWAAMAGIGIGKMVSYGNKIDVDDADLMEYFAQDEQIKVMTFYIEGVKDGRRFME
VAKRVTKIKPIIALKSGRTEYGAKAASSHTGSLAGQDVIYDAVFKQTGIIRAEDFEHMFDLAKAFAKCKLPKGDRIGIIT
DGGGAGVMASDAVAKFGLKLAELSEETLRFLREKFPPHAVVGNPTDVVGDTDAERYRLALEAFTKDPNVDAILVIVLFQV
PLLDEEEVIEIIADYAKKSDKPIVAVSMGGYKTDRYAKMLEEKGVPVYPTPERGVRALAGLVRYAEYLRKMGE

Sequences:

>Translated_473_residues
MINNLDIKEQLRSFFDPKAVAIIGATNKKGKVGNVIFENFKRNKERGIFKGNIYPVNPKLDEIDGYKVYHSVEELPDDTD
LAVVAIPAPAVPETMRKIAEKGIKAVVIITGGFGELGEEGKRMEQEILEIARAHGIRVIGPNCVGVYVPDTGVDTVFLPE
EKMDRPKSGPIAFVSQSGAFAAAMLDWAAMAGIGIGKMVSYGNKIDVDDADLMEYFAQDEQIKVMTFYIEGVKDGRRFME
VAKRVTKIKPIIALKSGRTEYGAKAASSHTGSLAGQDVIYDAVFKQTGIIRAEDFEHMFDLAKAFAKCKLPKGDRIGIIT
DGGGAGVMASDAVAKFGLKLAELSEETLRFLREKFPPHAVVGNPTDVVGDTDAERYRLALEAFTKDPNVDAILVIVLFQV
PLLDEEEVIEIIADYAKKSDKPIVAVSMGGYKTDRYAKMLEEKGVPVYPTPERGVRALAGLVRYAEYLRKMGE
>Mature_473_residues
MINNLDIKEQLRSFFDPKAVAIIGATNKKGKVGNVIFENFKRNKERGIFKGNIYPVNPKLDEIDGYKVYHSVEELPDDTD
LAVVAIPAPAVPETMRKIAEKGIKAVVIITGGFGELGEEGKRMEQEILEIARAHGIRVIGPNCVGVYVPDTGVDTVFLPE
EKMDRPKSGPIAFVSQSGAFAAAMLDWAAMAGIGIGKMVSYGNKIDVDDADLMEYFAQDEQIKVMTFYIEGVKDGRRFME
VAKRVTKIKPIIALKSGRTEYGAKAASSHTGSLAGQDVIYDAVFKQTGIIRAEDFEHMFDLAKAFAKCKLPKGDRIGIIT
DGGGAGVMASDAVAKFGLKLAELSEETLRFLREKFPPHAVVGNPTDVVGDTDAERYRLALEAFTKDPNVDAILVIVLFQV
PLLDEEEVIEIIADYAKKSDKPIVAVSMGGYKTDRYAKMLEEKGVPVYPTPERGVRALAGLVRYAEYLRKMGE

Specific function: Unknown

COG id: COG1042

COG function: function code C; Acyl-CoA synthetase (NDP forming)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfiQ [H]

Homologues:

Organism=Escherichia coli, GI1788938, Length=466, Percent_Identity=28.755364806867, Blast_Score=230, Evalue=2e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014089
- InterPro:   IPR013650
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR005809
- InterPro:   IPR016102 [H]

Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]

EC number: NA

Molecular weight: Translated: 51822; Mature: 51822

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINNLDIKEQLRSFFDPKAVAIIGATNKKGKVGNVIFENFKRNKERGIFKGNIYPVNPKL
CCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCEEECCEEECCCCC
DEIDGYKVYHSVEELPDDTDLAVVAIPAPAVPETMRKIAEKGIKAVVIITGGFGELGEEG
CCCCCCHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCHHHHHHH
KRMEQEILEIARAHGIRVIGPNCVGVYVPDTGVDTVFLPEEKMDRPKSGPIAFVSQSGAF
HHHHHHHHHHHHHCCEEEECCCEEEEEECCCCCCEEEECHHHHCCCCCCCEEEEECCCCH
AAAMLDWAAMAGIGIGKMVSYGNKIDVDDADLMEYFAQDEQIKVMTFYIEGVKDGRRFME
HHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEEEEECCHHHHHHHH
VAKRVTKIKPIIALKSGRTEYGAKAASSHTGSLAGQDVIYDAVFKQTGIIRAEDFEHMFD
HHHHHHHHCCEEEEECCCCHHCCHHCCCCCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHH
LAKAFAKCKLPKGDRIGIITDGGGAGVMASDAVAKFGLKLAELSEETLRFLREKFPPHAV
HHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEE
VGNPTDVVGDTDAERYRLALEAFTKDPNVDAILVIVLFQVPLLDEEEVIEIIADYAKKSD
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHEEHHHHCCCCCHHHHHHHHHHHHHCCC
KPIVAVSMGGYKTDRYAKMLEEKGVPVYPTPERGVRALAGLVRYAEYLRKMGE
CCEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MINNLDIKEQLRSFFDPKAVAIIGATNKKGKVGNVIFENFKRNKERGIFKGNIYPVNPKL
CCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCEEECCEEECCCCC
DEIDGYKVYHSVEELPDDTDLAVVAIPAPAVPETMRKIAEKGIKAVVIITGGFGELGEEG
CCCCCCHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCHHHHHHH
KRMEQEILEIARAHGIRVIGPNCVGVYVPDTGVDTVFLPEEKMDRPKSGPIAFVSQSGAF
HHHHHHHHHHHHHCCEEEECCCEEEEEECCCCCCEEEECHHHHCCCCCCCEEEEECCCCH
AAAMLDWAAMAGIGIGKMVSYGNKIDVDDADLMEYFAQDEQIKVMTFYIEGVKDGRRFME
HHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEEEEECCHHHHHHHH
VAKRVTKIKPIIALKSGRTEYGAKAASSHTGSLAGQDVIYDAVFKQTGIIRAEDFEHMFD
HHHHHHHHCCEEEEECCCCHHCCHHCCCCCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHH
LAKAFAKCKLPKGDRIGIITDGGGAGVMASDAVAKFGLKLAELSEETLRFLREKFPPHAV
HHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEE
VGNPTDVVGDTDAERYRLALEAFTKDPNVDAILVIVLFQVPLLDEEEVIEIIADYAKKSD
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHEEHHHHCCCCCHHHHHHHHHHHHHCCC
KPIVAVSMGGYKTDRYAKMLEEKGVPVYPTPERGVRALAGLVRYAEYLRKMGE
CCEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]