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The map label for this gene is rpl24p [H]

Identifier: 18978185

GI number: 18978185

Start: 1678696

End: 1679070

Strand: Reverse

Name: rpl24p [H]

Synonym: PF1813

Alternate gene names: 18978185

Gene position: 1679070-1678696 (Counterclockwise)

Preceding gene: 18978186

Following gene: 18978184

Centisome position: 87.99

GC content: 41.07

Gene sequence:

>375_bases
GTGGTAATAATGAAGATAAGCTCAAAGCAACCCAGGAAGCAGAGAAAGTTCCTATATAATGCTCCCCTTCACGTGAGGCA
AAAGTTGATGTCTGCTCCTTTAAGTAGGGAGTTAAGGGAGAAGTACAAGGTAAGAAACCTTCCAGTGAGGGTTGGTGATA
AGGTTAGGATAATGAGGGGAGACTACAAGGGTCATGAAGGGAAAGTAGTCGAAGTTGACCTAAAGAGATATAGGATATAT
GTTGAAGGAGCTACTCTAAGAAAGACAAACGGGACAGAGGTCTTCTATCCAATTCACCCTTCAAACGTGATGATTATTGA
GCTAAATTTAGAGGATGAGAAGAGAAAGAAAATAATTGAGAGGAGGGCTGGATAA

Upstream 100 bases:

>100_bases
GAAGGAGTTCCAAGGGGAACTGAAATTAGAGGTCCTGTGGCTAGAGAGGCTGCAGAAAGATGGGTTAGAATAGGAAGTAT
AGCTAGCATAATTGTGTGAG

Downstream 100 bases:

>100_bases
TGGCGAGAAAGGGTCCTAAGAGGCACCTTAAGAGACTTGCTGCTCCAACTTCATGGTATATTGAGAGGAAGGCCTACAAA
TGGGCTGTTAGGCCCAGACC

Product: 50S ribosomal protein L24P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MVIMKISSKQPRKQRKFLYNAPLHVRQKLMSAPLSRELREKYKVRNLPVRVGDKVRIMRGDYKGHEGKVVEVDLKRYRIY
VEGATLRKTNGTEVFYPIHPSNVMIIELNLEDEKRKKIIERRAG

Sequences:

>Translated_124_residues
MVIMKISSKQPRKQRKFLYNAPLHVRQKLMSAPLSRELREKYKVRNLPVRVGDKVRIMRGDYKGHEGKVVEVDLKRYRIY
VEGATLRKTNGTEVFYPIHPSNVMIIELNLEDEKRKKIIERRAG
>Mature_124_residues
MVIMKISSKQPRKQRKFLYNAPLHVRQKLMSAPLSRELREKYKVRNLPVRVGDKVRIMRGDYKGHEGKVVEVDLKRYRIY
VEGATLRKTNGTEVFYPIHPSNVMIIELNLEDEKRKKIIERRAG

Specific function: Located at the polypeptide exit tunnel on the outside of the subunit [H]

COG id: COG0198

COG function: function code J; Ribosomal protein L24

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L24P family [H]

Homologues:

Organism=Homo sapiens, GI7705813, Length=112, Percent_Identity=55.3571428571429, Blast_Score=115, Evalue=6e-27,
Organism=Homo sapiens, GI4506621, Length=112, Percent_Identity=54.4642857142857, Blast_Score=115, Evalue=8e-27,
Organism=Caenorhabditis elegans, GI17535693, Length=117, Percent_Identity=42.7350427350427, Blast_Score=101, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17535691, Length=99, Percent_Identity=42.4242424242424, Blast_Score=89, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI32564329, Length=96, Percent_Identity=43.75, Blast_Score=88, Evalue=9e-19,
Organism=Saccharomyces cerevisiae, GI6323376, Length=117, Percent_Identity=41.8803418803419, Blast_Score=92, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6321471, Length=121, Percent_Identity=42.1487603305785, Blast_Score=92, Evalue=2e-20,
Organism=Drosophila melanogaster, GI21357853, Length=117, Percent_Identity=49.5726495726496, Blast_Score=112, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR005825
- InterPro:   IPR014723
- InterPro:   IPR005756
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW [H]

EC number: NA

Molecular weight: Translated: 14676; Mature: 14676

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: PS01108 RIBOSOMAL_L24

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIMKISSKQPRKQRKFLYNAPLHVRQKLMSAPLSRELREKYKVRNLPVRVGDKVRIMRG
CEEEEECCCCCHHHHHEEECCCHHHHHHHHCCCCCHHHHHHHHHCCCCEEECCEEEEEEC
DYKGHEGKVVEVDLKRYRIYVEGATLRKTNGTEVFYPIHPSNVMIIELNLEDEKRKKIIE
CCCCCCCCEEEEEEEEEEEEECCCEEEECCCCEEEEEECCCCEEEEEEECCCHHHHHHHH
RRAG
HCCC
>Mature Secondary Structure
MVIMKISSKQPRKQRKFLYNAPLHVRQKLMSAPLSRELREKYKVRNLPVRVGDKVRIMRG
CEEEEECCCCCHHHHHEEECCCHHHHHHHHCCCCCHHHHHHHHHCCCCEEECCEEEEEEC
DYKGHEGKVVEVDLKRYRIYVEGATLRKTNGTEVFYPIHPSNVMIIELNLEDEKRKKIIE
CCCCCCCCEEEEEEEEEEEEECCCEEEECCCCEEEEEECCCCEEEEEEECCCHHHHHHHH
RRAG
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]