Click here to switch to the map view.

The map label for this gene is 18978092

Identifier: 18978092

GI number: 18978092

Start: 1599272

End: 1600000

Strand: Direct

Name: 18978092

Synonym: PF1720

Alternate gene names: NA

Gene position: 1599272-1600000 (Clockwise)

Preceding gene: 18978091

Following gene: 18978093

Centisome position: 83.81

GC content: 38.55

Gene sequence:

>729_bases
GTGAGAAGGGGGCTATCATTACTTGGTTTTATTATTGGTGCAGTTATTGGGATAATAATAGGAGCACTAATTTTAGCAGG
AATATTCCTCCTAGCTTTAGGGAGCACCATAAGTTTTCTAGACTTCCCCAACTGCCACTGCACATGTGAAACTATTAATA
ATGCAGGTCCTATAAAAGAAATAGGAGCGTATAATGCAACATCCCTTATCATAGAGGACGTAATTGGAACGGTAAAAATA
AAGCCAAGTAACGAACCACAGATAAAGGTTCTCTCCAACCTTCCGATAAATGTGTCCGTTTCTGAAGACTCGCTGGTTAT
AACGTGCTCAGAATGTCGCGAAAAGAGCTTTAAAAACGGAGAAATAATACTCATGGGAAACTTATCGAGCATAAAAACAT
CAGACATCCTGGGAAGACTTATAGTTGAAGTACCAACTAAGAGAATAGAGGTTGGAGACGTATTAGGGGAAGTTAATATT
CAAGCATACACAGAAGTGTTTGAGAGCGAGGACATTCTTGGAAGAGCCGAGATCAAGGCAACAAGAGAAGTTCAGATTGA
GGATGTCATAGGAGAGGTAAAAATCACGATACCAAAGAATTCTACCGCCAAGATATCATATTCTAAAATTATCGGAAAGA
TTGCTGATCTTTCAGAAGATAGCAATAAGATTGTTAAAGTAGATATTGAAGACATTCTGGGTGAGCTAACCGTTGAAAAC
GAAAAGTGA

Upstream 100 bases:

>100_bases
GATGAGAGAATTTGTTAAATTACTTAAGTGATCATTGTAAGTATTCATAATTCATAAATTTTTTATATTTTTGTTAGTCC
TTTTTCATTGGTGAATACTA

Downstream 100 bases:

>100_bases
AATAGTAAGGGCATTCATCCTAGGAAGTCTGTTAGAAGTAGCTATTCCAAAGCCTGGAAACGTTTCAAGATATAAGGACT
TTGAAGACCTAACATTCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MRRGLSLLGFIIGAVIGIIIGALILAGIFLLALGSTISFLDFPNCHCTCETINNAGPIKEIGAYNATSLIIEDVIGTVKI
KPSNEPQIKVLSNLPINVSVSEDSLVITCSECREKSFKNGEIILMGNLSSIKTSDILGRLIVEVPTKRIEVGDVLGEVNI
QAYTEVFESEDILGRAEIKATREVQIEDVIGEVKITIPKNSTAKISYSKIIGKIADLSEDSNKIVKVDIEDILGELTVEN
EK

Sequences:

>Translated_242_residues
MRRGLSLLGFIIGAVIGIIIGALILAGIFLLALGSTISFLDFPNCHCTCETINNAGPIKEIGAYNATSLIIEDVIGTVKI
KPSNEPQIKVLSNLPINVSVSEDSLVITCSECREKSFKNGEIILMGNLSSIKTSDILGRLIVEVPTKRIEVGDVLGEVNI
QAYTEVFESEDILGRAEIKATREVQIEDVIGEVKITIPKNSTAKISYSKIIGKIADLSEDSNKIVKVDIEDILGELTVEN
EK
>Mature_242_residues
MRRGLSLLGFIIGAVIGIIIGALILAGIFLLALGSTISFLDFPNCHCTCETINNAGPIKEIGAYNATSLIIEDVIGTVKI
KPSNEPQIKVLSNLPINVSVSEDSLVITCSECREKSFKNGEIILMGNLSSIKTSDILGRLIVEVPTKRIEVGDVLGEVNI
QAYTEVFESEDILGRAEIKATREVQIEDVIGEVKITIPKNSTAKISYSKIIGKIADLSEDSNKIVKVDIEDILGELTVEN
EK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26141; Mature: 26141

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRGLSLLGFIIGAVIGIIIGALILAGIFLLALGSTISFLDFPNCHCTCETINNAGPIKE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCHHH
IGAYNATSLIIEDVIGTVKIKPSNEPQIKVLSNLPINVSVSEDSLVITCSECREKSFKNG
HCCCCHHHHHHHHHHCEEEECCCCCCCEEEEECCCEEEEECCCCEEEEEHHHHCCCCCCC
EIILMGNLSSIKTSDILGRLIVEVPTKRIEVGDVLGEVNIQAYTEVFESEDILGRAEIKA
CEEEEECCCCCCHHHHHHHHHHHCCCCEEEHHHHHHCCCHHHHHHHHCCCCCCCHHHCCH
TREVQIEDVIGEVKITIPKNSTAKISYSKIIGKIADLSEDSNKIVKVDIEDILGELTVEN
HHEEEEECCCCEEEEEECCCCCCEEEHHHHHHHHHCCCCCCCCEEEEEHHHHHCCCCCCC
EK
CC
>Mature Secondary Structure
MRRGLSLLGFIIGAVIGIIIGALILAGIFLLALGSTISFLDFPNCHCTCETINNAGPIKE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCHHH
IGAYNATSLIIEDVIGTVKIKPSNEPQIKVLSNLPINVSVSEDSLVITCSECREKSFKNG
HCCCCHHHHHHHHHHCEEEECCCCCCCEEEEECCCEEEEECCCCEEEEEHHHHCCCCCCC
EIILMGNLSSIKTSDILGRLIVEVPTKRIEVGDVLGEVNIQAYTEVFESEDILGRAEIKA
CEEEEECCCCCCHHHHHHHHHHHCCCCEEEHHHHHHCCCHHHHHHHHCCCCCCCHHHCCH
TREVQIEDVIGEVKITIPKNSTAKISYSKIIGKIADLSEDSNKIVKVDIEDILGELTVEN
HHEEEEECCCCEEEEEECCCCCCEEEHHHHHHHHHCCCCCCCCEEEEEHHHHHCCCCCCC
EK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA