| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is 18978067
Identifier: 18978067
GI number: 18978067
Start: 1574650
End: 1575846
Strand: Direct
Name: 18978067
Synonym: PF1695
Alternate gene names: NA
Gene position: 1574650-1575846 (Clockwise)
Preceding gene: 18978066
Following gene: 18978068
Centisome position: 82.52
GC content: 43.02
Gene sequence:
>1197_bases ATGAGAAAGGTAGGAATTACACTTTCTGTAGTTGCTCTAGTAATAATGGGATTTGTAGCAGGATGTATTGGTGGTACTCA AACCCAGGGAGAAAAAGTAAAGGTAGCAGTTCTCTTTGACGTTGGAGGGAGGGGAGATTTAAGCTTCAATGATATGGCAT ACTTAGGAGCAGAAAGGGCAAAGAAAGAACTTGGAGTAGAAGTTGAATACATGACTCCAAAGTCTCGTGAAGATATGGTA CCTTTACTAAAGCAACTGGCTGAAAGCAAGGAATATGACCTCCTAGTTCTAATTGGGTTCCTTTGGACTACTCCATTAGA TCAAGTAGCAGATCAATATCCAGATCAAAAGTTTGCCCTCATAGACTCAACTACTGGAAAAGTTAGGGAGAATGAAGTAG ATATTCTCTTTAGAGAACAAGAAGCTGCAGCACTCATAGGCGTGATAGCCTCTGGAATGGCCTATGAACTTGGTGGCGAT ACCATAGGTGCTGTAGCTGGAATGGACATTCCACCACTTTGGAAATTCCACATAGGCTACCTCTATGGAGCAAAGTATTT TGAGAAGAAGACTGGGAAGCCCGTGAAGTTGCTCTGGCAGTACACTGGAACATTTACAGATACACAAGTTGGATACACTA CTGGAATGCAACTGTTGCAACAGGGTGCCAAAGTTCTCTATGGCCTAGCAGGTCTAACTCACGTTGGAATGTTTGACGCA GTAATCGACTGGAATAAGCAAGGAAAGGGCAAAGCACTTGCTATTGGTCAAGACGCAAGTCAAGAGTGGTATGCACCAGA GTATATCCCAATTAGCGGAGCTAAGAGAGTTGACGTTGCTGTTTATACGGCCATTGAAATGGTTGTCAAAAATCAATGGA AAGGAGGAATAATGACCCTCGGTCTCAAAGAGGGAGGCGTTGGCTACTGGAATTTGGATGGAGTTAGGCAATTTGCAGAA TTTGCCCAGGAGGGTGGAAAACTAAAAGACATGACCCCAGAAGATGTTGTTAGAATAGTAAAAGAGCAGAGAGAGAAGTA CATAAAGCCAGAAGTTTGGGAGATCGTGCGTGAGCTTGAGGAGAAGATAAAGAATGGAGAGATAAAGTTCAAGACACCAC AGAGCCACGACGAATATGAGCAGATAATTAAGGAGTTAGAGAAAGGTAACTTAGATGCCGCCCTCGAAAAAGAGTAA
Upstream 100 bases:
>100_bases GAAGAAGTTTGGAGAGAATTTGGAGATGTTATAATTACTTCAACAAGATAAGACGAAAAAGATAAATCCTGAAACATGAT TTATTTTTGGTGATACTAAG
Downstream 100 bases:
>100_bases CTTTTTATTACCCCTTTCTCTTCTTTTTTCAGGTGTGCCAAGTTATGAATGCAATTGAGATGGAGAATATAGTAAAGGTT TATCCAGATGGAGTTGTAGC
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MRKVGITLSVVALVIMGFVAGCIGGTQTQGEKVKVAVLFDVGGRGDLSFNDMAYLGAERAKKELGVEVEYMTPKSREDMV PLLKQLAESKEYDLLVLIGFLWTTPLDQVADQYPDQKFALIDSTTGKVRENEVDILFREQEAAALIGVIASGMAYELGGD TIGAVAGMDIPPLWKFHIGYLYGAKYFEKKTGKPVKLLWQYTGTFTDTQVGYTTGMQLLQQGAKVLYGLAGLTHVGMFDA VIDWNKQGKGKALAIGQDASQEWYAPEYIPISGAKRVDVAVYTAIEMVVKNQWKGGIMTLGLKEGGVGYWNLDGVRQFAE FAQEGGKLKDMTPEDVVRIVKEQREKYIKPEVWEIVRELEEKIKNGEIKFKTPQSHDEYEQIIKELEKGNLDAALEKE
Sequences:
>Translated_398_residues MRKVGITLSVVALVIMGFVAGCIGGTQTQGEKVKVAVLFDVGGRGDLSFNDMAYLGAERAKKELGVEVEYMTPKSREDMV PLLKQLAESKEYDLLVLIGFLWTTPLDQVADQYPDQKFALIDSTTGKVRENEVDILFREQEAAALIGVIASGMAYELGGD TIGAVAGMDIPPLWKFHIGYLYGAKYFEKKTGKPVKLLWQYTGTFTDTQVGYTTGMQLLQQGAKVLYGLAGLTHVGMFDA VIDWNKQGKGKALAIGQDASQEWYAPEYIPISGAKRVDVAVYTAIEMVVKNQWKGGIMTLGLKEGGVGYWNLDGVRQFAE FAQEGGKLKDMTPEDVVRIVKEQREKYIKPEVWEIVRELEEKIKNGEIKFKTPQSHDEYEQIIKELEKGNLDAALEKE >Mature_398_residues MRKVGITLSVVALVIMGFVAGCIGGTQTQGEKVKVAVLFDVGGRGDLSFNDMAYLGAERAKKELGVEVEYMTPKSREDMV PLLKQLAESKEYDLLVLIGFLWTTPLDQVADQYPDQKFALIDSTTGKVRENEVDILFREQEAAALIGVIASGMAYELGGD TIGAVAGMDIPPLWKFHIGYLYGAKYFEKKTGKPVKLLWQYTGTFTDTQVGYTTGMQLLQQGAKVLYGLAGLTHVGMFDA VIDWNKQGKGKALAIGQDASQEWYAPEYIPISGAKRVDVAVYTAIEMVVKNQWKGGIMTLGLKEGGVGYWNLDGVRQFAE FAQEGGKLKDMTPEDVVRIVKEQREKYIKPEVWEIVRELEEKIKNGEIKFKTPQSHDEYEQIIKELEKGNLDAALEKE
Specific function: Unknown
COG id: COG1744
COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BMP lipoprotein family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1695_PYRFU (Q8U0A4)
Other databases:
- EMBL: AE009950 - RefSeq: NP_579424.1 - ProteinModelPortal: Q8U0A4 - SMR: Q8U0A4 - EnsemblBacteria: EBPYRT00000005930 - GeneID: 1469572 - GenomeReviews: AE009950_GR - KEGG: pfu:PF1695 - NMPDR: fig|186497.1.peg.1743 - GeneTree: EBGT00050000023112 - HOGENOM: HBG617374 - OMA: FHASGSA - ProtClustDB: CLSK689486 - InterPro: IPR003760
Pfam domain/function: PF02608 Bmp
EC number: NA
Molecular weight: Translated: 44202; Mature: 44202
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKVGITLSVVALVIMGFVAGCIGGTQTQGEKVKVAVLFDVGGRGDLSFNDMAYLGAERA CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHH KKELGVEVEYMTPKSREDMVPLLKQLAESKEYDLLVLIGFLWTTPLDQVADQYPDQKFAL HHHHCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEHHHHCCCHHHHHHHCCCCEEEE IDSTTGKVRENEVDILFREQEAAALIGVIASGMAYELGGDTIGAVAGMDIPPLWKFHIGY EECCCCCCCCCCEEEEEECHHHHHHHHHHHCCCEEECCCCCCHHHCCCCCCCHHHHHHHH LYGAKYFEKKTGKPVKLLWQYTGTFTDTQVGYTTGMQLLQQGAKVLYGLAGLTHVGMFDA HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIDWNKQGKGKALAIGQDASQEWYAPEYIPISGAKRVDVAVYTAIEMVVKNQWKGGIMTL HHCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEE GLKEGGVGYWNLDGVRQFAEFAQEGGKLKDMTPEDVVRIVKEQREKYIKPEVWEIVRELE EEECCCCCEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH EKIKNGEIKFKTPQSHDEYEQIIKELEKGNLDAALEKE HHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRKVGITLSVVALVIMGFVAGCIGGTQTQGEKVKVAVLFDVGGRGDLSFNDMAYLGAERA CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHH KKELGVEVEYMTPKSREDMVPLLKQLAESKEYDLLVLIGFLWTTPLDQVADQYPDQKFAL HHHHCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEHHHHCCCHHHHHHHCCCCEEEE IDSTTGKVRENEVDILFREQEAAALIGVIASGMAYELGGDTIGAVAGMDIPPLWKFHIGY EECCCCCCCCCCEEEEEECHHHHHHHHHHHCCCEEECCCCCCHHHCCCCCCCHHHHHHHH LYGAKYFEKKTGKPVKLLWQYTGTFTDTQVGYTTGMQLLQQGAKVLYGLAGLTHVGMFDA HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIDWNKQGKGKALAIGQDASQEWYAPEYIPISGAKRVDVAVYTAIEMVVKNQWKGGIMTL HHCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEE GLKEGGVGYWNLDGVRQFAEFAQEGGKLKDMTPEDVVRIVKEQREKYIKPEVWEIVRELE EEECCCCCEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH EKIKNGEIKFKTPQSHDEYEQIIKELEKGNLDAALEKE HHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA