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The map label for this gene is rps19e [H]

Identifier: 18977871

GI number: 18977871

Start: 1398214

End: 1398666

Strand: Direct

Name: rps19e [H]

Synonym: PF1499

Alternate gene names: 18977871

Gene position: 1398214-1398666 (Clockwise)

Preceding gene: 18977870

Following gene: 18977872

Centisome position: 73.27

GC content: 42.83

Gene sequence:

>453_bases
ATGGCAACAGTTTATGACGTTCCCGGTGATCTTTTAGTGGAAAGAGTAGCCCAAAGACTGAAGGAGATTCCAGAAATAAA
ACCACCAGAGTGGGCTCCATTCGTAAAGACAGGAAGACACAAAGAAAGACTTCCAGAGCAGGAAGATTGGTGGTACTATA
GAGTTGCATCAATCTTAAGAAGGGTTTACCTTGATGGCCCAGTTGGAATTGAAAGGCTTAGGACTTACTATGGTGGAAGA
AAGAACAGAGGACATGCTCCAGAGAAATTCTACAAGGCTGGAGGTAGCATAATAAGAAAGGCCCTACAGCAGTTGGAAGC
TGCTGGATTTGTAGAAAAAGTCCCAGGAAAAGGAAGGGTAATAACACCAAAGGGGAGAAGCTTCCTCGATAAAATAGCCA
CTGAGCTAAAGAAGGAACTTGAAGAAATTATTCCCGAGCTTAAGAAGTATTGA

Upstream 100 bases:

>100_bases
GGAGCAATCAAGGAAAGAAATTAAAGAAGAGCCCATACGTAAGATCAAATTGGATATCATCGAATTTAGAAAGAAATTCA
AGAGAGGGAGGGGTTGATAA

Downstream 100 bases:

>100_bases
ACCATCTCTTTTTTCCATAAAGATTTTATATTTTAACCTCACTTCTAATTCTTGGTGTTGAGTAATGGTAAAGATTAGGG
CATCAAAGCTCAGGGATGTT

Product: 30S ribosomal protein S19e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MATVYDVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRVYLDGPVGIERLRTYYGGR
KNRGHAPEKFYKAGGSIIRKALQQLEAAGFVEKVPGKGRVITPKGRSFLDKIATELKKELEEIIPELKKY

Sequences:

>Translated_150_residues
MATVYDVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRVYLDGPVGIERLRTYYGGR
KNRGHAPEKFYKAGGSIIRKALQQLEAAGFVEKVPGKGRVITPKGRSFLDKIATELKKELEEIIPELKKY
>Mature_149_residues
ATVYDVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRVYLDGPVGIERLRTYYGGRK
NRGHAPEKFYKAGGSIIRKALQQLEAAGFVEKVPGKGRVITPKGRSFLDKIATELKKELEEIIPELKKY

Specific function: Unknown

COG id: COG2238

COG function: function code J; Ribosomal protein S19E (S16A)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S19e family [H]

Homologues:

Organism=Homo sapiens, GI4506695, Length=134, Percent_Identity=40.2985074626866, Blast_Score=100, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17508697, Length=141, Percent_Identity=41.8439716312057, Blast_Score=110, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6324027, Length=140, Percent_Identity=38.5714285714286, Blast_Score=89, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6324451, Length=140, Percent_Identity=38.5714285714286, Blast_Score=89, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24649452, Length=134, Percent_Identity=42.5373134328358, Blast_Score=112, Evalue=8e-26,
Organism=Drosophila melanogaster, GI17647891, Length=134, Percent_Identity=41.044776119403, Blast_Score=100, Evalue=6e-22,
Organism=Drosophila melanogaster, GI24642576, Length=134, Percent_Identity=41.044776119403, Blast_Score=100, Evalue=6e-22,
Organism=Drosophila melanogaster, GI24642574, Length=134, Percent_Identity=41.044776119403, Blast_Score=100, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001266
- InterPro:   IPR018277
- InterPro:   IPR011991
- ProDom:   PD003854 [H]

Pfam domain/function: PF01090 Ribosomal_S19e [H]

EC number: NA

Molecular weight: Translated: 17362; Mature: 17231

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS00628 RIBOSOMAL_S19E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATVYDVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILR
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHCCCCCCHHHHHHHHHHH
RVYLDGPVGIERLRTYYGGRKNRGHAPEKFYKAGGSIIRKALQQLEAAGFVEKVPGKGRV
HHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCE
ITPKGRSFLDKIATELKKELEEIIPELKKY
ECCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ATVYDVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILR
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHCCCCCCHHHHHHHHHHH
RVYLDGPVGIERLRTYYGGRKNRGHAPEKFYKAGGSIIRKALQQLEAAGFVEKVPGKGRV
HHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCE
ITPKGRSFLDKIATELKKELEEIIPELKKY
ECCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]