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The map label for this gene is 18977870

Identifier: 18977870

GI number: 18977870

Start: 1397791

End: 1398210

Strand: Direct

Name: 18977870

Synonym: PF1498

Alternate gene names: NA

Gene position: 1397791-1398210 (Clockwise)

Preceding gene: 18977869

Following gene: 18977871

Centisome position: 73.25

GC content: 39.05

Gene sequence:

>420_bases
ATGGTCACCAAGCGCTTACCTGGGAAAATTAGGCGAGCCCTTAGGGCGAGATATTATGATATAGAGCCAAAAGCGTGGAT
TGGGAAGAGAGGGTTAGAGGAGAGTGTTATAAAGGAAATAGAGAATCAACTGGCAAGGACTGGAGTTCTAAAAGTCGAAA
TTAGAAAAGGTGCCCTAATAGCAACTAAAATGACTAGAAAGCAGATAGCTGAAAAAGTTGCCGAGCTAACCGATAGCGAA
CTTTTAGAAGTTAGGGGCAAAAGATTTATATTATTCAAACCGAGAGAGGGTTGGGAAAAGTATTTAAAGAAGATTAAAAT
GAAGGAGCAATCAAGGAAAGAAATTAAAGAAGAGCCCATACGTAAGATCAAATTGGATATCATCGAATTTAGAAAGAAAT
TCAAGAGAGGGAGGGGTTGA

Upstream 100 bases:

>100_bases
ATTCTAGGGGTTAATATTTCGAGGATAATTGAGGACATAGAGCAAAACAATCGACATGTTTAAAAGCCCATATTGATTTC
CCAACATGAGGTGAGTACTT

Downstream 100 bases:

>100_bases
TAAATGGCAACAGTTTATGACGTTCCCGGTGATCTTTTAGTGGAAAGAGTAGCCCAAAGACTGAAGGAGATTCCAGAAAT
AAAACCACCAGAGTGGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MVTKRLPGKIRRALRARYYDIEPKAWIGKRGLEESVIKEIENQLARTGVLKVEIRKGALIATKMTRKQIAEKVAELTDSE
LLEVRGKRFILFKPREGWEKYLKKIKMKEQSRKEIKEEPIRKIKLDIIEFRKKFKRGRG

Sequences:

>Translated_139_residues
MVTKRLPGKIRRALRARYYDIEPKAWIGKRGLEESVIKEIENQLARTGVLKVEIRKGALIATKMTRKQIAEKVAELTDSE
LLEVRGKRFILFKPREGWEKYLKKIKMKEQSRKEIKEEPIRKIKLDIIEFRKKFKRGRG
>Mature_139_residues
MVTKRLPGKIRRALRARYYDIEPKAWIGKRGLEESVIKEIENQLARTGVLKVEIRKGALIATKMTRKQIAEKVAELTDSE
LLEVRGKRFILFKPREGWEKYLKKIKMKEQSRKEIKEEPIRKIKLDIIEFRKKFKRGRG

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 16520; Mature: 16520

Theoretical pI: Translated: 11.15; Mature: 11.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTKRLPGKIRRALRARYYDIEPKAWIGKRGLEESVIKEIENQLARTGVLKVEIRKGALI
CCCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCHH
ATKMTRKQIAEKVAELTDSELLEVRGKRFILFKPREGWEKYLKKIKMKEQSRKEIKEEPI
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
RKIKLDIIEFRKKFKRGRG
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVTKRLPGKIRRALRARYYDIEPKAWIGKRGLEESVIKEIENQLARTGVLKVEIRKGALI
CCCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCHH
ATKMTRKQIAEKVAELTDSELLEVRGKRFILFKPREGWEKYLKKIKMKEQSRKEIKEEPI
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
RKIKLDIIEFRKKFKRGRG
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]