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The map label for this gene is 18977842

Identifier: 18977842

GI number: 18977842

Start: 1375936

End: 1377114

Strand: Reverse

Name: 18977842

Synonym: PF1470

Alternate gene names: NA

Gene position: 1377114-1375936 (Counterclockwise)

Preceding gene: 18977844

Following gene: 18977832

Centisome position: 72.17

GC content: 40.71

Gene sequence:

>1179_bases
ATGAGATTCTCTCCAATAATAGGCCCAAGTAGTTACGTCAGTTCTTTATGCCACAGCATACTCAGGGGAGAATTGTTTAG
TACTTGCTCTGTTGGATGTATTTACTGCTATGCACGTTGGTATAGAGGAGCCCATGGAAAAGAGAAGCCCCTATGGGAAT
CTCTTAAGCTAATAAAAATGCTTGGTGGAATAATAAGGGAAGGCTTGGCAATTACTCCCATAAGAGTATCTACTCTCAGT
GATCCCTTTCAGGGCGAAGGAAAAATTACACTTAAATTCTTGAAACTCGCGCTTAAGGAGAAGGTTCCAGTAATTATCAA
TACTAAGCTAATTCCCAGAGAGAAGCACATAAAAACGATAGAAAGGTTAGCTGAAGAAGGGCTGGTGGTAGTTCAAGTTT
CTCTACCAACATTGGAAGAAACGAAAGTTTTAGAGCCCTTTTCTCCTTCCCCTGGACAACGGCTAGAACTAATCGAGAGG
CTTTCTAGGGCTGGGGTTCCCACAATTGTAAGGGTTCAACCATTTGTTCCTGGGTGGATACGAGATATACATACTTTCAT
TGAAGAAATAGCTTCAGCAGGAGCAAGGATGATTATCTTAGAGTTTTTAAGAATTGAGAAAGAATTACTTCCACTATTTT
CAAAGTTGTTCCCAGGTGAAGATATCTACAAGAGGGAATGGGAATCTTATCTCCCAGGGACTTCAACAGAGGAAGCTCCA
TTACTTCATCCTCCACTTGATTATAGACTCTCTATTGCTCGCGAATTTTCTATCAAAGCAGAAAAGGAGGGTTTGGCTTT
TTCAACTTGTAAAGAGGGCCTTTTCGAATTCCATACCCCCTTAAATGTAGATTGTTGTGGGATGGCATTCTTTGATGTCG
AGTACATAAGTAGAAGGCCTACCCTATGGGATTTGTATCTTGAGATAGTGGAGAATGGGAAAGCAAAAGGGGAAGATCTC
TGGGAGAGATGCAGAAGAGAAGAGCTTCTCTGTAGAGAAAACTTGACTCCTTACCCCAGGTGGTTTAGGAGGGGATTTAT
TGCCCATGAAAAAAGATTGGAGAGCGTTTTAAGAAAGCCTCATATAGTGGAGAGAATCACCCCCAGCATTAAATACGAAA
ATGGGTATTTTATAAAAAGGAAAGAGAGAAGTAATTCAGGCTATAATTCCTTCTTTTAG

Upstream 100 bases:

>100_bases
CTAACCAAGTCTTCGGGCTTAAAGATGTATACTCCCATGTGTAATCCCCTCATATGTTTTGTCAAAAGGAATAAAAACTT
TCCACTCTTTAAATTTGCTG

Downstream 100 bases:

>100_bases
CTCCCCTTCTGTCTTTGCAACTATTGCAGTACCAGTTAGGTCTCCAGTAACCGAGGATTGCATCTATTCCAAGGATCATT
GCATAGGCTGCGGCCACATT

Product: hypothetical protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Radical SAM Family Protein; DNA Repair Photolyase; Radical SAM Superfamily Protein; Radical SAM; Radical SAM Domain Protein Protein; Radical Sam Domain Protein; Radical SAM Protein; Radical SAM Superfamily; Elongator

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MRFSPIIGPSSYVSSLCHSILRGELFSTCSVGCIYCYARWYRGAHGKEKPLWESLKLIKMLGGIIREGLAITPIRVSTLS
DPFQGEGKITLKFLKLALKEKVPVIINTKLIPREKHIKTIERLAEEGLVVVQVSLPTLEETKVLEPFSPSPGQRLELIER
LSRAGVPTIVRVQPFVPGWIRDIHTFIEEIASAGARMIILEFLRIEKELLPLFSKLFPGEDIYKREWESYLPGTSTEEAP
LLHPPLDYRLSIAREFSIKAEKEGLAFSTCKEGLFEFHTPLNVDCCGMAFFDVEYISRRPTLWDLYLEIVENGKAKGEDL
WERCRREELLCRENLTPYPRWFRRGFIAHEKRLESVLRKPHIVERITPSIKYENGYFIKRKERSNSGYNSFF

Sequences:

>Translated_392_residues
MRFSPIIGPSSYVSSLCHSILRGELFSTCSVGCIYCYARWYRGAHGKEKPLWESLKLIKMLGGIIREGLAITPIRVSTLS
DPFQGEGKITLKFLKLALKEKVPVIINTKLIPREKHIKTIERLAEEGLVVVQVSLPTLEETKVLEPFSPSPGQRLELIER
LSRAGVPTIVRVQPFVPGWIRDIHTFIEEIASAGARMIILEFLRIEKELLPLFSKLFPGEDIYKREWESYLPGTSTEEAP
LLHPPLDYRLSIAREFSIKAEKEGLAFSTCKEGLFEFHTPLNVDCCGMAFFDVEYISRRPTLWDLYLEIVENGKAKGEDL
WERCRREELLCRENLTPYPRWFRRGFIAHEKRLESVLRKPHIVERITPSIKYENGYFIKRKERSNSGYNSFF
>Mature_392_residues
MRFSPIIGPSSYVSSLCHSILRGELFSTCSVGCIYCYARWYRGAHGKEKPLWESLKLIKMLGGIIREGLAITPIRVSTLS
DPFQGEGKITLKFLKLALKEKVPVIINTKLIPREKHIKTIERLAEEGLVVVQVSLPTLEETKVLEPFSPSPGQRLELIER
LSRAGVPTIVRVQPFVPGWIRDIHTFIEEIASAGARMIILEFLRIEKELLPLFSKLFPGEDIYKREWESYLPGTSTEEAP
LLHPPLDYRLSIAREFSIKAEKEGLAFSTCKEGLFEFHTPLNVDCCGMAFFDVEYISRRPTLWDLYLEIVENGKAKGEDL
WERCRREELLCRENLTPYPRWFRRGFIAHEKRLESVLRKPHIVERITPSIKYENGYFIKRKERSNSGYNSFF

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45267; Mature: 45267

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFSPIIGPSSYVSSLCHSILRGELFSTCSVGCIYCYARWYRGAHGKEKPLWESLKLIKM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LGGIIREGLAITPIRVSTLSDPFQGEGKITLKFLKLALKEKVPVIINTKLIPREKHIKTI
HHHHHHCCCEECCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHH
ERLAEEGLVVVQVSLPTLEETKVLEPFSPSPGQRLELIERLSRAGVPTIVRVQPFVPGWI
HHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHH
RDIHTFIEEIASAGARMIILEFLRIEKELLPLFSKLFPGEDIYKREWESYLPGTSTEEAP
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC
LLHPPLDYRLSIAREFSIKAEKEGLAFSTCKEGLFEFHTPLNVDCCGMAFFDVEYISRRP
CCCCCCCHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCC
TLWDLYLEIVENGKAKGEDLWERCRREELLCRENLTPYPRWFRRGFIAHEKRLESVLRKP
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
HIVERITPSIKYENGYFIKRKERSNSGYNSFF
HHHHHCCCCEEECCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MRFSPIIGPSSYVSSLCHSILRGELFSTCSVGCIYCYARWYRGAHGKEKPLWESLKLIKM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LGGIIREGLAITPIRVSTLSDPFQGEGKITLKFLKLALKEKVPVIINTKLIPREKHIKTI
HHHHHHCCCEECCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHH
ERLAEEGLVVVQVSLPTLEETKVLEPFSPSPGQRLELIERLSRAGVPTIVRVQPFVPGWI
HHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHH
RDIHTFIEEIASAGARMIILEFLRIEKELLPLFSKLFPGEDIYKREWESYLPGTSTEEAP
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC
LLHPPLDYRLSIAREFSIKAEKEGLAFSTCKEGLFEFHTPLNVDCCGMAFFDVEYISRRP
CCCCCCCHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCC
TLWDLYLEIVENGKAKGEDLWERCRREELLCRENLTPYPRWFRRGFIAHEKRLESVLRKP
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
HIVERITPSIKYENGYFIKRKERSNSGYNSFF
HHHHHCCCCEEECCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA