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The map label for this gene is 18977764

Identifier: 18977764

GI number: 18977764

Start: 1304178

End: 1306127

Strand: Reverse

Name: 18977764

Synonym: PF1392

Alternate gene names: NA

Gene position: 1306127-1304178 (Counterclockwise)

Preceding gene: 18977766

Following gene: 18977763

Centisome position: 68.45

GC content: 37.49

Gene sequence:

>1950_bases
ATGAAAGAAAGCATGAGCAGTGTGGATATAAAATACATAACCGAGGAACTAAAAGACATGATAGTGGGTTCGAGGGTTGA
GAAAATTTATCATGAAGGTAATGAAATTAGGTTTAAACTTCACAAGACGGGAGTAGGAAGGGTAGATTTGTTAATTGAGG
CTGGAAAGAGAATCCACATAACTACTTACGTTAAGGAGAATCTACAGCCAACTTCATTCGCGATGCTTTTACGAAAATAT
TTGTCTGGAAAATTTCTTGAGGATATAAGGCAATACGAATTCGATAGGGTAGTTATCTTGTCGTTTGGTGAATATTTCCT
CATCGCCGAACTTTTTGGTAGGGGGAATATTATATTTGTAACTAAAGATTGGGAAATAATTGGGGCTCTTAGATATGAAG
AGTTTAAAGATAGGGCAATAAAACCAAAAATTAAGTACGTTTTTCCCCCTTCTAGAGCTAACCCCCTAAAAGTTAGCTTT
GAAGAGTTCAAAGAGATAATATTGAACTCCCAGGGAACTGAAATCGTGAGAGCGCTTGCGAAAAATTTTAGCATTGGAGG
CTTATATTCTGAAGAGACTCTCCTTAGAGCAAAAATAGATAAAGATAGAAAGGTTGATGAACTAAGTGAAGAAGAATTAA
GACTCGTATATGATACTCTTCTAACAGTTCTAAACGATGAAAAAAAGCCTAACATTGTATATAACAAAGAAGGGGTTATG
GTGGATGTCGTTCCAATAGATCTACAATGGTATCGGGAATATACAAAAAGATATTATGAATCTTTTAGCGAAGCTTTGGA
TGAATACTTTGGAAAGCTAACAATTGAAAAAGCAAGACTCGAAAAAACCAAGCAACTAGAAGAAAGGAGAAAGGCTCTTG
AAATTTCTTTAAGGAGAATTGAAGAACAGATAAAAGGATTTGAAAAAGAAGCCATGACTAATCAGGAAAAGGGTGACGCG
CTCTATGCCCACTATTCCATTGTAAATGAAATCTTAAGAGTTATTTCCTCAGCATTAAAGCAATATGGAGTTGAAGAAGT
TAAAAAGAGGATAGAAGAAGGAAAGAAAGCTGGCTACCCTTGGGCAAAAATGATAATCGACGTAACCGACAACAAAGTAA
CGCTCAATTTGGATGGGATAAAAGTTTCTCTCGATGTTGAAAAATCACTAGAAGAAAATGCTGAGCTTTACTATGAGAGG
GCGAAAAAAGCAAAGAAGAAACTGGAAGGAGCAAAAATAGCATATGAGGAAACTAAAAGAAAATTAATAGAGCTTGAAAA
AGAGATAGAGCGAGAGAGTAAAGAAATCAACATAAAGAAAATCACCCGCAAAAAGAAAAAGTGGTTTGAAAAATTTAGGT
GGTTTATTAGCAGCGAAGGTTTTCTGGTCATCGGAGGGAAGGATGCTACAACGAATGAAATCGTTGTTAAAAAGCATATG
GATGAAAATGACATCTATTGTCACGCAGACATATGGGGGGCTCCTCATGTTATTATAAAAAATGGTAGAAATGCCAGTGA
AAAAACGATCAGAGAAGCTTGTCAATTTGCCGTTGCCATGAGTAGAGCATGGAGCGAGGGATTAGCTTCGGCAGATGCTT
ACTGGGTTTACCCAGAGCAAGTTAGCAAACAAGCCCCTGCTGGAGAATACCTACCCAAAGGAGCCTTTATGGTGTATGGG
AAGAGAAATTGGATTCATGGGATCCCTCTTAAACTTGCGGTTGGAATAGTTAATGTTGAGGGGGAAGAGCTTGTCATGTG
TGGTCCAGTTGATGCGGTAAAAGCTCATACAAACAAGTATGTAGTGATAAGGCCTGGAGGATTAAAGAAGAGTGACCTTG
TAAAGAAAATCCAAAAAATATTTGAAAAATGGGGATATAGGGTCTCTGAAGAAGATATAATGAGCGTTTTGCCCCCAGGA
CATGGAGAGATTGAGGAGGTGGTTGAATAA

Upstream 100 bases:

>100_bases
TATGTATATAAAATATAGAAAACTGTAAGTCCTGGGTAAGAGATGTAAATAACCACCCCATCTTTATAAAATTGCAAAAC
TAACCTTAGGGGGGGTATTT

Downstream 100 bases:

>100_bases
TGTTTAAGCTTTACTCTCTTGCAAGAGAATTTGCAAGGGATTTACTTTTTGAAATTAATGGAGATGTAGTTACCTTATCA
ATAAAGGGGGTCTTACTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 649; Mature: 649

Protein sequence:

>649_residues
MKESMSSVDIKYITEELKDMIVGSRVEKIYHEGNEIRFKLHKTGVGRVDLLIEAGKRIHITTYVKENLQPTSFAMLLRKY
LSGKFLEDIRQYEFDRVVILSFGEYFLIAELFGRGNIIFVTKDWEIIGALRYEEFKDRAIKPKIKYVFPPSRANPLKVSF
EEFKEIILNSQGTEIVRALAKNFSIGGLYSEETLLRAKIDKDRKVDELSEEELRLVYDTLLTVLNDEKKPNIVYNKEGVM
VDVVPIDLQWYREYTKRYYESFSEALDEYFGKLTIEKARLEKTKQLEERRKALEISLRRIEEQIKGFEKEAMTNQEKGDA
LYAHYSIVNEILRVISSALKQYGVEEVKKRIEEGKKAGYPWAKMIIDVTDNKVTLNLDGIKVSLDVEKSLEENAELYYER
AKKAKKKLEGAKIAYEETKRKLIELEKEIERESKEINIKKITRKKKKWFEKFRWFISSEGFLVIGGKDATTNEIVVKKHM
DENDIYCHADIWGAPHVIIKNGRNASEKTIREACQFAVAMSRAWSEGLASADAYWVYPEQVSKQAPAGEYLPKGAFMVYG
KRNWIHGIPLKLAVGIVNVEGEELVMCGPVDAVKAHTNKYVVIRPGGLKKSDLVKKIQKIFEKWGYRVSEEDIMSVLPPG
HGEIEEVVE

Sequences:

>Translated_649_residues
MKESMSSVDIKYITEELKDMIVGSRVEKIYHEGNEIRFKLHKTGVGRVDLLIEAGKRIHITTYVKENLQPTSFAMLLRKY
LSGKFLEDIRQYEFDRVVILSFGEYFLIAELFGRGNIIFVTKDWEIIGALRYEEFKDRAIKPKIKYVFPPSRANPLKVSF
EEFKEIILNSQGTEIVRALAKNFSIGGLYSEETLLRAKIDKDRKVDELSEEELRLVYDTLLTVLNDEKKPNIVYNKEGVM
VDVVPIDLQWYREYTKRYYESFSEALDEYFGKLTIEKARLEKTKQLEERRKALEISLRRIEEQIKGFEKEAMTNQEKGDA
LYAHYSIVNEILRVISSALKQYGVEEVKKRIEEGKKAGYPWAKMIIDVTDNKVTLNLDGIKVSLDVEKSLEENAELYYER
AKKAKKKLEGAKIAYEETKRKLIELEKEIERESKEINIKKITRKKKKWFEKFRWFISSEGFLVIGGKDATTNEIVVKKHM
DENDIYCHADIWGAPHVIIKNGRNASEKTIREACQFAVAMSRAWSEGLASADAYWVYPEQVSKQAPAGEYLPKGAFMVYG
KRNWIHGIPLKLAVGIVNVEGEELVMCGPVDAVKAHTNKYVVIRPGGLKKSDLVKKIQKIFEKWGYRVSEEDIMSVLPPG
HGEIEEVVE
>Mature_649_residues
MKESMSSVDIKYITEELKDMIVGSRVEKIYHEGNEIRFKLHKTGVGRVDLLIEAGKRIHITTYVKENLQPTSFAMLLRKY
LSGKFLEDIRQYEFDRVVILSFGEYFLIAELFGRGNIIFVTKDWEIIGALRYEEFKDRAIKPKIKYVFPPSRANPLKVSF
EEFKEIILNSQGTEIVRALAKNFSIGGLYSEETLLRAKIDKDRKVDELSEEELRLVYDTLLTVLNDEKKPNIVYNKEGVM
VDVVPIDLQWYREYTKRYYESFSEALDEYFGKLTIEKARLEKTKQLEERRKALEISLRRIEEQIKGFEKEAMTNQEKGDA
LYAHYSIVNEILRVISSALKQYGVEEVKKRIEEGKKAGYPWAKMIIDVTDNKVTLNLDGIKVSLDVEKSLEENAELYYER
AKKAKKKLEGAKIAYEETKRKLIELEKEIERESKEINIKKITRKKKKWFEKFRWFISSEGFLVIGGKDATTNEIVVKKHM
DENDIYCHADIWGAPHVIIKNGRNASEKTIREACQFAVAMSRAWSEGLASADAYWVYPEQVSKQAPAGEYLPKGAFMVYG
KRNWIHGIPLKLAVGIVNVEGEELVMCGPVDAVKAHTNKYVVIRPGGLKKSDLVKKIQKIFEKWGYRVSEEDIMSVLPPG
HGEIEEVVE

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32130516, Length=652, Percent_Identity=29.2944785276074, Blast_Score=238, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI32565397, Length=633, Percent_Identity=30.8056872037915, Blast_Score=246, Evalue=3e-65,
Organism=Saccharomyces cerevisiae, GI6325248, Length=372, Percent_Identity=23.3870967741935, Blast_Score=84, Evalue=7e-17,
Organism=Drosophila melanogaster, GI281362530, Length=351, Percent_Identity=31.3390313390313, Blast_Score=169, Evalue=4e-42,
Organism=Drosophila melanogaster, GI281362528, Length=351, Percent_Identity=31.3390313390313, Blast_Score=169, Evalue=4e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616
- InterPro:   IPR010979 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 75074; Mature: 75074

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKESMSSVDIKYITEELKDMIVGSRVEKIYHEGNEIRFKLHKTGVGRVDLLIEAGKRIHI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEHEEECCCEEEE
TTYVKENLQPTSFAMLLRKYLSGKFLEDIRQYEFDRVVILSFGEYFLIAELFGRGNIIFV
EEEECCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCEEEE
TKDWEIIGALRYEEFKDRAIKPKIKYVFPPSRANPLKVSFEEFKEIILNSQGTEIVRALA
ECCCCEEEHHHHHHHHCCCCCCCEEEEECCCCCCCCEECHHHHHHHHHCCCCHHHHHHHH
KNFSIGGLYSEETLLRAKIDKDRKVDELSEEELRLVYDTLLTVLNDEKKPNIVYNKEGVM
HCCCCCCCCCCCHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCE
VDVVPIDLQWYREYTKRYYESFSEALDEYFGKLTIEKARLEKTKQLEERRKALEISLRRI
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
EEQIKGFEKEAMTNQEKGDALYAHYSIVNEILRVISSALKQYGVEEVKKRIEEGKKAGYP
HHHHHCHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC
WAKMIIDVTDNKVTLNLDGIKVSLDVEKSLEENAELYYERAKKAKKKLEGAKIAYEETKR
HHHEEEEECCCEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KLIELEKEIERESKEINIKKITRKKKKWFEKFRWFISSEGFLVIGGKDATTNEIVVKKHM
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECC
DENDIYCHADIWGAPHVIIKNGRNASEKTIREACQFAVAMSRAWSEGLASADAYWVYPEQ
CCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHH
VSKQAPAGEYLPKGAFMVYGKRNWIHGIPLKLAVGIVNVEGEELVMCGPVDAVKAHTNKY
HCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCEEEECCCHHHHHCCCCE
VVIRPGGLKKSDLVKKIQKIFEKWGYRVSEEDIMSVLPPGHGEIEEVVE
EEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHCC
>Mature Secondary Structure
MKESMSSVDIKYITEELKDMIVGSRVEKIYHEGNEIRFKLHKTGVGRVDLLIEAGKRIHI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEHEEECCCEEEE
TTYVKENLQPTSFAMLLRKYLSGKFLEDIRQYEFDRVVILSFGEYFLIAELFGRGNIIFV
EEEECCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCEEEE
TKDWEIIGALRYEEFKDRAIKPKIKYVFPPSRANPLKVSFEEFKEIILNSQGTEIVRALA
ECCCCEEEHHHHHHHHCCCCCCCEEEEECCCCCCCCEECHHHHHHHHHCCCCHHHHHHHH
KNFSIGGLYSEETLLRAKIDKDRKVDELSEEELRLVYDTLLTVLNDEKKPNIVYNKEGVM
HCCCCCCCCCCCHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCE
VDVVPIDLQWYREYTKRYYESFSEALDEYFGKLTIEKARLEKTKQLEERRKALEISLRRI
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
EEQIKGFEKEAMTNQEKGDALYAHYSIVNEILRVISSALKQYGVEEVKKRIEEGKKAGYP
HHHHHCHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC
WAKMIIDVTDNKVTLNLDGIKVSLDVEKSLEENAELYYERAKKAKKKLEGAKIAYEETKR
HHHEEEEECCCEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KLIELEKEIERESKEINIKKITRKKKKWFEKFRWFISSEGFLVIGGKDATTNEIVVKKHM
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECC
DENDIYCHADIWGAPHVIIKNGRNASEKTIREACQFAVAMSRAWSEGLASADAYWVYPEQ
CCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHH
VSKQAPAGEYLPKGAFMVYGKRNWIHGIPLKLAVGIVNVEGEELVMCGPVDAVKAHTNKY
HCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCEEEECCCHHHHHCCCCE
VVIRPGGLKKSDLVKKIQKIFEKWGYRVSEEDIMSVLPPGHGEIEEVVE
EEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]