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The map label for this gene is 18977724

Identifier: 18977724

GI number: 18977724

Start: 1270974

End: 1271378

Strand: Reverse

Name: 18977724

Synonym: PF1352

Alternate gene names: NA

Gene position: 1271378-1270974 (Counterclockwise)

Preceding gene: 18977725

Following gene: 18977723

Centisome position: 66.63

GC content: 37.78

Gene sequence:

>405_bases
GTGATAGTAATTGACGCATCCTCCATCGCCAAATACATCCTAAGGGAAGAAAATTGGGAGAAAGTAAGAAAATACCTACT
AGACAAACCATACTCTCTAACACTAGCTTTAGCTGAAGTGTCAAATGCCATCTGGAAACATTACGTGCTGTACAAAGCTA
TATCAATTGAGGAAGCTAAGTTAATGTATGAAGCATTAAAGAGGCTTGAAGAGGACGTTATAACTTTTGAACCTCTTGAA
AATTATCTTTGGGATGCTATGAACATAGCCATCAGCTGGGGAATTCCAATTTATGATGCCCTCTATTTGGCTCAAGCAAA
AAAGTATGGCAAGCTTTTAACAAGCGACAAAGAGCAATGGAAGATTGCAAAAAAGCTTGGAATTAAAGTGGAATACGTGG
AGTAA

Upstream 100 bases:

>100_bases
GAGTACAAAAGGAAGAAAGCCTTAGAGGAAATCGATGCTATGTTGGCAAATTTACCAAAAGCTGAAAAGGGAACTGCAAG
AAAATACGTGAGGGAGGATC

Downstream 100 bases:

>100_bases
TAGTAAGATCTCCAAACCCAAATGCAAAGATATTTAAAAATCCACGCTTTTAGGTTAAAGGTGGTGATAATATGAGAATG
CTTCTAATTCACAGCGACTA

Product: hypothetical protein

Products: NA

Alternate protein names: PilT Protein Domain Protein

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MIVIDASSIAKYILREENWEKVRKYLLDKPYSLTLALAEVSNAIWKHYVLYKAISIEEAKLMYEALKRLEEDVITFEPLE
NYLWDAMNIAISWGIPIYDALYLAQAKKYGKLLTSDKEQWKIAKKLGIKVEYVE

Sequences:

>Translated_134_residues
MIVIDASSIAKYILREENWEKVRKYLLDKPYSLTLALAEVSNAIWKHYVLYKAISIEEAKLMYEALKRLEEDVITFEPLE
NYLWDAMNIAISWGIPIYDALYLAQAKKYGKLLTSDKEQWKIAKKLGIKVEYVE
>Mature_134_residues
MIVIDASSIAKYILREENWEKVRKYLLDKPYSLTLALAEVSNAIWKHYVLYKAISIEEAKLMYEALKRLEEDVITFEPLE
NYLWDAMNIAISWGIPIYDALYLAQAKKYGKLLTSDKEQWKIAKKLGIKVEYVE

Specific function: Unknown

COG id: COG4113

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15725; Mature: 15725

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVIDASSIAKYILREENWEKVRKYLLDKPYSLTLALAEVSNAIWKHYVLYKAISIEEAK
CEEEEHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMYEALKRLEEDVITFEPLENYLWDAMNIAISWGIPIYDALYLAQAKKYGKLLTSDKEQW
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHCCCHHHH
KIAKKLGIKVEYVE
HHHHHHCCEEEEEC
>Mature Secondary Structure
MIVIDASSIAKYILREENWEKVRKYLLDKPYSLTLALAEVSNAIWKHYVLYKAISIEEAK
CEEEEHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMYEALKRLEEDVITFEPLENYLWDAMNIAISWGIPIYDALYLAQAKKYGKLLTSDKEQW
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHCCCHHHH
KIAKKLGIKVEYVE
HHHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA