Click here to switch to the map view.

The map label for this gene is 18977718

Identifier: 18977718

GI number: 18977718

Start: 1265093

End: 1265962

Strand: Direct

Name: 18977718

Synonym: PF1346

Alternate gene names: NA

Gene position: 1265093-1265962 (Clockwise)

Preceding gene: 18977717

Following gene: 18977721

Centisome position: 66.3

GC content: 46.44

Gene sequence:

>870_bases
GTGAGCACAGGAAGGACAGCTATCACACAACCATTGAGGAGGCTTATGAGATGTTCAAGAGCTCTAAGGCGAGGCACTTG
GCCTTGTTCCATAGGGCTCCAAGGTATTCCTATCAAGAGTACGCCGTTGCAGCTAAGGAGTTGTGCCCAGAGGCTTACGT
TCCCAGGGACTTCGACAGGGTTTTTGTGGGAGGTATGGGCAATGTCATATTTAAGGTACGTTAAGATCATTGGAACAGTT
CACGTCTCCCCTGAAAGCGTGAGAGAAGTTAGGGAGACTATAATTAGGGAAAAACCCGATGCTATAGCATTAGAGTTAGA
TTATCCCAGGCTATTGGCATTGCTTAGGAGGGAAAGGCTAACCCTCCCCCAGGCCCTAAAGCTTGGTAAGATGGGCATCT
TTGGATTCATACTCCAAGAGCTTGAAATGTTCTTTGGAAGGAGCTTTGGAGAGTCCCCAGGGGAGGAGATGATTGAAGCT
TACAAAGCCGCAGCCTCCCTGGGAATTCCAGTTTACCTAATAGATAAGCCCGTGAACGAGACTTTAGCTGGAATGCTTTC
TTCTCCACCGATAGAAAAGCTTAGATTTGGGATTGAGGTTTTGGCAAGCCTGCTCCCAGGAAAGCTGAAAGAGTTGGACT
ATTCGTACCTAATGAAGGAGTTCAGGGAAAAGTTTCCGCACATGTATAAGGTGTTGGTTGAGGAGAGGAACCTCTACATG
GCGATTAACCTAATGAGGATAGTTGACTCTCTGCTTGAAAAAAAGAAGAAGGTGAAGGTTGTTGCCGTAGTTGGACTGGG
GCATAAGAAAGGAATAGAGAGAATACTAAATGCTCACAAGCCAAGGGCCGTTAAAATCAACTCCCTATAG

Upstream 100 bases:

>100_bases
GCTAAGGTAGTTTACACTGGAGACACTGAGCCAATTGACGACATAGTTGAGTTTTCGAAGAGAGCGGATTTGTTAATACA
CGAGGCAACTTACATATCTA

Downstream 100 bases:

>100_bases
ACTTTTAGCTTTCTGAACTCCCTGTCCCCAATGCTGTCCTTCTTGCTAACCTCCTCGTAGAACTTCTCTAGCTCGCTGAG
AACATCCTCCAGAACCTCAA

Product: pheromone shutdown protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MSTGRTAITQPLRRLMRCSRALRRGTWPCSIGLQGIPIKSTPLQLRSCAQRLTFPGTSTGFLWEVWAMSYLRYVKIIGTV
HVSPESVREVRETIIREKPDAIALELDYPRLLALLRRERLTLPQALKLGKMGIFGFILQELEMFFGRSFGESPGEEMIEA
YKAAASLGIPVYLIDKPVNETLAGMLSSPPIEKLRFGIEVLASLLPGKLKELDYSYLMKEFREKFPHMYKVLVEERNLYM
AINLMRIVDSLLEKKKKVKVVAVVGLGHKKGIERILNAHKPRAVKINSL

Sequences:

>Translated_289_residues
MSTGRTAITQPLRRLMRCSRALRRGTWPCSIGLQGIPIKSTPLQLRSCAQRLTFPGTSTGFLWEVWAMSYLRYVKIIGTV
HVSPESVREVRETIIREKPDAIALELDYPRLLALLRRERLTLPQALKLGKMGIFGFILQELEMFFGRSFGESPGEEMIEA
YKAAASLGIPVYLIDKPVNETLAGMLSSPPIEKLRFGIEVLASLLPGKLKELDYSYLMKEFREKFPHMYKVLVEERNLYM
AINLMRIVDSLLEKKKKVKVVAVVGLGHKKGIERILNAHKPRAVKINSL
>Mature_288_residues
STGRTAITQPLRRLMRCSRALRRGTWPCSIGLQGIPIKSTPLQLRSCAQRLTFPGTSTGFLWEVWAMSYLRYVKIIGTVH
VSPESVREVRETIIREKPDAIALELDYPRLLALLRRERLTLPQALKLGKMGIFGFILQELEMFFGRSFGESPGEEMIEAY
KAAASLGIPVYLIDKPVNETLAGMLSSPPIEKLRFGIEVLASLLPGKLKELDYSYLMKEFREKFPHMYKVLVEERNLYMA
INLMRIVDSLLEKKKKVKVVAVVGLGHKKGIERILNAHKPRAVKINSL

Specific function: Unknown

COG id: COG1916

COG function: function code S; Uncharacterized homolog of PrgY (pheromone shutdown protein)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI71988206, Length=253, Percent_Identity=29.6442687747036, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71988217, Length=253, Percent_Identity=29.6442687747036, Blast_Score=75, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002816
- InterPro:   IPR005230 [H]

Pfam domain/function: PF01963 TraB [H]

EC number: NA

Molecular weight: Translated: 32811; Mature: 32679

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTGRTAITQPLRRLMRCSRALRRGTWPCSIGLQGIPIKSTPLQLRSCAQRLTFPGTSTG
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCH
FLWEVWAMSYLRYVKIIGTVHVSPESVREVRETIIREKPDAIALELDYPRLLALLRRERL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHC
TLPQALKLGKMGIFGFILQELEMFFGRSFGESPGEEMIEAYKAAASLGIPVYLIDKPVNE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHH
TLAGMLSSPPIEKLRFGIEVLASLLPGKLKELDYSYLMKEFREKFPHMYKVLVEERNLYM
HHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
AINLMRIVDSLLEKKKKVKVVAVVGLGHKKGIERILNAHKPRAVKINSL
HHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHCCCCCEEEECCC
>Mature Secondary Structure 
STGRTAITQPLRRLMRCSRALRRGTWPCSIGLQGIPIKSTPLQLRSCAQRLTFPGTSTG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCH
FLWEVWAMSYLRYVKIIGTVHVSPESVREVRETIIREKPDAIALELDYPRLLALLRRERL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHC
TLPQALKLGKMGIFGFILQELEMFFGRSFGESPGEEMIEAYKAAASLGIPVYLIDKPVNE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHH
TLAGMLSSPPIEKLRFGIEVLASLLPGKLKELDYSYLMKEFREKFPHMYKVLVEERNLYM
HHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
AINLMRIVDSLLEKKKKVKVVAVVGLGHKKGIERILNAHKPRAVKINSL
HHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]