| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is 18977716
Identifier: 18977716
GI number: 18977716
Start: 1263683
End: 1264393
Strand: Direct
Name: 18977716
Synonym: PF1344
Alternate gene names: NA
Gene position: 1263683-1264393 (Clockwise)
Preceding gene: 33359560
Following gene: 18977717
Centisome position: 66.22
GC content: 45.29
Gene sequence:
>711_bases ATGTTTGGATGGAGGGGAAGAATTGGGCTTTTAGTCCCATCATCAAACACTACAATGGAGATGGAGCTGCACTCTTACTT ACCCGAAGGAGTATCCCTTCACACCTCACGAATTCCGTTAAAGAAGGTCAATGAGGAGGAGCTAACCAAGATGGTTGGCT ATTCGATTGAAGGGGCCAAACTTCTAGCAGACGCTGGAGTTGAGGTTATAGCCTTTGGTTGCACAAGCGGCTCTTTCATT GGAGGGAAAGACTTCGAGAAGGAGCTAGAAATGAAGATAGAGGAGGAAGTGAAAATTGAAACGTTCACGACAAGTACGGC AGTTTTAGAGGCTTTGAACGTTCTCGACATTCAGTCCTTAGTTGTTGTAACTCCGTACATAGATGAAATAAATCAGAGGG AGAAGGAGTTCCTGGAGGAGAACGGCTTCACAGTTTTAGACATAAGGGGATTGGGAATAGAAGACAACTTAGAGATTGGT AGGTTAAGTCCTTACATTCCCTACATGTTGGCCAAGTCGATGTTCATGGAGGAAGCTGACGGAGTGTTCATAAGTTGCAC AAACCTGAGGACTTTTGAAATAATTGAGAAGCTTGAGAGGGACTTGGGAATTCCAGTGGTGACAAGCAACCAAGCAACGC TTTGGTATGCCCTGAGAGAGATAGACGTTAGGGAGAGCTTACCCCTCGGAAAGCTCCTAAGGGAGTTCTAA
Upstream 100 bases:
>100_bases AAATTTTGCCAAAATTAACTGCATAATTATGTAATTACATAATTATTTTGTTGATGGCAAACTTAATATAAGCCCTCGAC AACCAAGAACGGGTGTTTCG
Downstream 100 bases:
>100_bases TGATTGAGGTAATCTTCCTGGGAACTGGGGGAATAAAGCCCACTCCCGAGAGAAATGTTCCCTCAATAGCGATTAGGATA GGGAGTGAGATAGTCCTCTT
Product: putative maleate cis-trans isomerase
Products: NA
Alternate protein names: AMDase [H]
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MFGWRGRIGLLVPSSNTTMEMELHSYLPEGVSLHTSRIPLKKVNEEELTKMVGYSIEGAKLLADAGVEVIAFGCTSGSFI GGKDFEKELEMKIEEEVKIETFTTSTAVLEALNVLDIQSLVVVTPYIDEINQREKEFLEENGFTVLDIRGLGIEDNLEIG RLSPYIPYMLAKSMFMEEADGVFISCTNLRTFEIIEKLERDLGIPVVTSNQATLWYALREIDVRESLPLGKLLREF
Sequences:
>Translated_236_residues MFGWRGRIGLLVPSSNTTMEMELHSYLPEGVSLHTSRIPLKKVNEEELTKMVGYSIEGAKLLADAGVEVIAFGCTSGSFI GGKDFEKELEMKIEEEVKIETFTTSTAVLEALNVLDIQSLVVVTPYIDEINQREKEFLEENGFTVLDIRGLGIEDNLEIG RLSPYIPYMLAKSMFMEEADGVFISCTNLRTFEIIEKLERDLGIPVVTSNQATLWYALREIDVRESLPLGKLLREF >Mature_236_residues MFGWRGRIGLLVPSSNTTMEMELHSYLPEGVSLHTSRIPLKKVNEEELTKMVGYSIEGAKLLADAGVEVIAFGCTSGSFI GGKDFEKELEMKIEEEVKIETFTTSTAVLEALNVLDIQSLVVVTPYIDEINQREKEFLEENGFTVLDIRGLGIEDNLEIG RLSPYIPYMLAKSMFMEEADGVFISCTNLRTFEIIEKLERDLGIPVVTSNQATLWYALREIDVRESLPLGKLLREF
Specific function: Unknown
COG id: COG3473
COG function: function code Q; Maleate cis-trans isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =4.1.1.76 [H]
Molecular weight: Translated: 26565; Mature: 26565
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGWRGRIGLLVPSSNTTMEMELHSYLPEGVSLHTSRIPLKKVNEEELTKMVGYSIEGAK CCCCCCCEEEEEECCCCEEEEEHHHHCCCCCEEECCCCCHHHCCHHHHHHHHCCCCCCHH LLADAGVEVIAFGCTSGSFIGGKDFEKELEMKIEEEVKIETFTTSTAVLEALNVLDIQSL HHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHCCCCE VVVTPYIDEINQREKEFLEENGFTVLDIRGLGIEDNLEIGRLSPYIPYMLAKSMFMEEAD EEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC GVFISCTNLRTFEIIEKLERDLGIPVVTSNQATLWYALREIDVRESLPLGKLLREF CEEEEECCCHHHHHHHHHHHHCCCEEEECCCCEEEEEEHHHCHHHCCCHHHHHHHC >Mature Secondary Structure MFGWRGRIGLLVPSSNTTMEMELHSYLPEGVSLHTSRIPLKKVNEEELTKMVGYSIEGAK CCCCCCCEEEEEECCCCEEEEEHHHHCCCCCEEECCCCCHHHCCHHHHHHHHCCCCCCHH LLADAGVEVIAFGCTSGSFIGGKDFEKELEMKIEEEVKIETFTTSTAVLEALNVLDIQSL HHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHCCCCE VVVTPYIDEINQREKEFLEENGFTVLDIRGLGIEDNLEIGRLSPYIPYMLAKSMFMEEAD EEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC GVFISCTNLRTFEIIEKLERDLGIPVVTSNQATLWYALREIDVRESLPLGKLLREF CEEEEECCCHHHHHHHHHHHHCCCEEEECCCCEEEEEEHHHCHHHCCCHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1369144 [H]