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The map label for this gene is vhuG [H]

Identifier: 18977703

GI number: 18977703

Start: 1251888

End: 1252601

Strand: Direct

Name: vhuG [H]

Synonym: PF1331

Alternate gene names: 18977703

Gene position: 1251888-1252601 (Clockwise)

Preceding gene: 18977702

Following gene: 18977704

Centisome position: 65.6

GC content: 43.28

Gene sequence:

>714_bases
ATGAAGTTGGGTGTTTTTGAACTTACGGACTGTGGTGGATGTGCGCTCAACCTACTATTCCTCTATGATAAGCTTCTCGA
CCTCCTCGAGTTCTATGAAATAGCTGAATTCCACATGGCAACTTCCAAAAAGAGCAGGGAAAAAATTGATGTTGCTTTGG
TAACTGGAACTGTATCGACACAGAGGGATTTGGAGGTTTTAAGAGATGCAAGGAATAGGAGCGAATATCTGATAGCTTTG
GGGACTTGTGCAACTCATGGAAGCGTTCAAGGAGTAATTGAAAACTCGAAAGAGGCTTACAGAAGAGTTTATGGGAATGG
AAAGCCCCCAGTAAAACTCTTGAATCCAAAACCAGTGACGGACTATGTTCCCGTAGACTTTGCTATTCCAGGATGTCCAT
ATGATAAAGAAGAGGTTTTCCAAGTTTTGATAGATATAGCAAAAGGTATAGAGCCTGTAGCTAAGGATTATCCCGTCTGC
TTGGAGTGTAAGTTGAATGAATATGAGTGCGTTCTTCTAAAGAAGAGAATTCCCTGCTTAGGTCCAGTAACTGCTGGAGG
GTGCAATGCGAAGTGCCCATCTTATGGACTGGGATGCATTGGGTGTAGGGGGCCTTCTTTGGACAACAACGTTCCTGGAA
TGTTCGAAGTTCTTAAGGAAATTCTTCCTGATGAGGAGATTGCTAGGAAACTAAGGACTTTTGCGAGGTGGTAG

Upstream 100 bases:

>100_bases
GTCACTGCATAGTTGGAACGAGTGTATCCATTAAGTACATCTGTAAGGATGGTCCCGTTTTCACTTATTGGGATGCTCTT
TCCACAAGGGGGTTGATATG

Downstream 100 bases:

>100_bases
TTATGATAATCGAGCTTGATGAGTTTACTAGGGTAGAGGGGAATGGAAAGGCAGAGATAGTAATTGAAAACGGTGAGGTT
AAGGATGCTAGGGTAAAAAT

Product: H-II delta (hydrogenase subunit delta)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MKLGVFELTDCGGCALNLLFLYDKLLDLLEFYEIAEFHMATSKKSREKIDVALVTGTVSTQRDLEVLRDARNRSEYLIAL
GTCATHGSVQGVIENSKEAYRRVYGNGKPPVKLLNPKPVTDYVPVDFAIPGCPYDKEEVFQVLIDIAKGIEPVAKDYPVC
LECKLNEYECVLLKKRIPCLGPVTAGGCNAKCPSYGLGCIGCRGPSLDNNVPGMFEVLKEILPDEEIARKLRTFARW

Sequences:

>Translated_237_residues
MKLGVFELTDCGGCALNLLFLYDKLLDLLEFYEIAEFHMATSKKSREKIDVALVTGTVSTQRDLEVLRDARNRSEYLIAL
GTCATHGSVQGVIENSKEAYRRVYGNGKPPVKLLNPKPVTDYVPVDFAIPGCPYDKEEVFQVLIDIAKGIEPVAKDYPVC
LECKLNEYECVLLKKRIPCLGPVTAGGCNAKCPSYGLGCIGCRGPSLDNNVPGMFEVLKEILPDEEIARKLRTFARW
>Mature_237_residues
MKLGVFELTDCGGCALNLLFLYDKLLDLLEFYEIAEFHMATSKKSREKIDVALVTGTVSTQRDLEVLRDARNRSEYLIAL
GTCATHGSVQGVIENSKEAYRRVYGNGKPPVKLLNPKPVTDYVPVDFAIPGCPYDKEEVFQVLIDIAKGIEPVAKDYPVC
LECKLNEYECVLLKKRIPCLGPVTAGGCNAKCPSYGLGCIGCRGPSLDNNVPGMFEVLKEILPDEEIARKLRTFARW

Specific function: Unknown

COG id: COG1941

COG function: function code C; Coenzyme F420-reducing hydrogenase, gamma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the [NiFe]/[NiFeSe] hydrogenase small subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006137 [H]

Pfam domain/function: PF01058 Oxidored_q6 [H]

EC number: NA

Molecular weight: Translated: 26285; Mature: 26285

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGVFELTDCGGCALNLLFLYDKLLDLLEFYEIAEFHMATSKKSREKIDVALVTGTVST
CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCC
QRDLEVLRDARNRSEYLIALGTCATHGSVQGVIENSKEAYRRVYGNGKPPVKLLNPKPVT
HHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC
DYVPVDFAIPGCPYDKEEVFQVLIDIAKGIEPVAKDYPVCLECKLNEYECVLLKKRIPCL
CCCCCEEECCCCCCCHHHHHHHHHHHHHCCCHHHHCCCEEEEEECCCCEEEEEHHCCCCC
GPVTAGGCNAKCPSYGLGCIGCRGPSLDNNVPGMFEVLKEILPDEEIARKLRTFARW
CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKLGVFELTDCGGCALNLLFLYDKLLDLLEFYEIAEFHMATSKKSREKIDVALVTGTVST
CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCC
QRDLEVLRDARNRSEYLIALGTCATHGSVQGVIENSKEAYRRVYGNGKPPVKLLNPKPVT
HHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC
DYVPVDFAIPGCPYDKEEVFQVLIDIAKGIEPVAKDYPVCLECKLNEYECVLLKKRIPCL
CCCCCEEECCCCCCCHHHHHHHHHHHHHCCCHHHHCCCEEEEEECCCCEEEEEHHCCCCC
GPVTAGGCNAKCPSYGLGCIGCRGPSLDNNVPGMFEVLKEILPDEEIARKLRTFARW
CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]