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The map label for this gene is 18977491

Identifier: 18977491

GI number: 18977491

Start: 1067252

End: 1067761

Strand: Reverse

Name: 18977491

Synonym: PF1119

Alternate gene names: NA

Gene position: 1067761-1067252 (Counterclockwise)

Preceding gene: 18977492

Following gene: 18977490

Centisome position: 55.95

GC content: 41.57

Gene sequence:

>510_bases
ATGGAAGAGTACGCCTTAGAGGAGCTGTTTGTTAGGGGAATTGAGATCAACTATCTCTATGTTTGTCCAACTAAGCTATG
GTTTTTTACACATGGGATAACTATGGAGCAAGAGAGCGAGTGGGTAGACTTGGGCAAGTTTCTTCATGAGCAGAGGTACG
AAAATGAAGAAAAAGAAGTTCTAATAGGCCCAATAAGAATTGATTTTATCAGCAGGGGAGATGTTATTGAGGTTCATGAA
GTAAAGCTTGGAAAGAGAATGGAGAGAGCTCATGAGATGCAGGCTCTCTACTATCTCTATTACCTTAAGAAGCACGGTAT
AAAAGCAAAGGCAATACTCCATTATCCAAAGCTGAACGAGAAAAGGGAAGTTACACTGGAGGGGAGAGAAAGAGAGGTTG
AGGAAGCTATAGTGGAAGTCGAGGTAATAAAATCCTCTTCTAAGCCTCCCAAGCCCAGGAAGAGTAAGATTTGTAGAAAA
TGTGCGTATAAGGAACTTTGTTGGGGGTAG

Upstream 100 bases:

>100_bases
TCTCAGATAGAGGGCCTGGGAGATATTTACTTGTTGCTGAATTAGATTATTCACCCGAAATGGGTTTATTAAGAAAACCC
CGTGAGGGGGATATTCTCTA

Downstream 100 bases:

>100_bases
AGAAATGAGAAAAAAGTCTTTAACAATTTTTTCTGACGGAACGCTGTTGAGAAGGGAAAATACATTGTACTTTGAAAATG
TGAATGGGAGAAAGCCCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MEEYALEELFVRGIEINYLYVCPTKLWFFTHGITMEQESEWVDLGKFLHEQRYENEEKEVLIGPIRIDFISRGDVIEVHE
VKLGKRMERAHEMQALYYLYYLKKHGIKAKAILHYPKLNEKREVTLEGREREVEEAIVEVEVIKSSSKPPKPRKSKICRK
CAYKELCWG

Sequences:

>Translated_169_residues
MEEYALEELFVRGIEINYLYVCPTKLWFFTHGITMEQESEWVDLGKFLHEQRYENEEKEVLIGPIRIDFISRGDVIEVHE
VKLGKRMERAHEMQALYYLYYLKKHGIKAKAILHYPKLNEKREVTLEGREREVEEAIVEVEVIKSSSKPPKPRKSKICRK
CAYKELCWG
>Mature_169_residues
MEEYALEELFVRGIEINYLYVCPTKLWFFTHGITMEQESEWVDLGKFLHEQRYENEEKEVLIGPIRIDFISRGDVIEVHE
VKLGKRMERAHEMQALYYLYYLKKHGIKAKAILHYPKLNEKREVTLEGREREVEEAIVEVEVIKSSSKPPKPRKSKICRK
CAYKELCWG

Specific function: Unknown

COG id: COG1468

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013343
- InterPro:   IPR022765 [H]

Pfam domain/function: PF01930 DUF83 [H]

EC number: NA

Molecular weight: Translated: 20167; Mature: 20167

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEYALEELFVRGIEINYLYVCPTKLWFFTHGITMEQESEWVDLGKFLHEQRYENEEKEV
CCHHHHHHHHHCCEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEE
LIGPIRIDFISRGDVIEVHEVKLGKRMERAHEMQALYYLYYLKKHGIKAKAILHYPKLNE
EEEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
KREVTLEGREREVEEAIVEVEVIKSSSKPPKPRKSKICRKCAYKELCWG
CCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEEYALEELFVRGIEINYLYVCPTKLWFFTHGITMEQESEWVDLGKFLHEQRYENEEKEV
CCHHHHHHHHHCCEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEE
LIGPIRIDFISRGDVIEVHEVKLGKRMERAHEMQALYYLYYLKKHGIKAKAILHYPKLNE
EEEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
KREVTLEGREREVEEAIVEVEVIKSSSKPPKPRKSKICRKCAYKELCWG
CCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]