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The map label for this gene is 18977455

Identifier: 18977455

GI number: 18977455

Start: 1032190

End: 1033431

Strand: Reverse

Name: 18977455

Synonym: PF1083

Alternate gene names: NA

Gene position: 1033431-1032190 (Counterclockwise)

Preceding gene: 18977456

Following gene: 18977451

Centisome position: 54.16

GC content: 43.4

Gene sequence:

>1242_bases
GTGAGGGCAGTAGTTGTTGGAGCTGGGCTTGGTGGCCTTCTTGCTGGGGCATTTTTGGCGAGGAATGGACATGAAATCAT
TGTCCTAGAGAAGTCAGCCATGATTGGAGGAAGGTTTACGAATCTCCCCTATAAAGGCTTCCAGCTCTCTACTGGAGCTT
TACACATGATTCCTCACGGCGAAGATGGTCCTTTGGCACATCTACTAAGAATTTTGGGGGCTAAAGTGGAAATAGTGAAT
TCAAATCCAAAAGGGAAAATTCTGTGGGAAGGGAAAATTTTTCACTATAGGGAGAGCTGGAAGTTCTTGAGCGTGAAGGA
GAAGGCCAAAGCTCTCAAGCTCTTGGCTGAGATACGGATGAATAAATTGCCTAAAGAAGAGATCCCCGCTGATGAATGGA
TAAAGGAGAAAATAGGAGAGAATGAGTTCTTGCTGAGTGTTCTTGAGAGCTTTGCTGGGTGGGCAGATAGCGTTTCTCTT
AGTGACCTTACAGCTCTAGAGTTGGCAAAAGAGATTAGGGCAGCTTTAAGATGGGGAGGGCCTGGGCTAATTAGAGGGGG
ATGCAAGGCTGTCATTGATGAGCTTGAAAGAATAATAATGGAAAACAAGGGCAAGATTTTAACGAGAAAAGAGGTCGTTG
AAATCAATATTGAAGAAAAGAAGGTTTATACAAGGGATAATGAGGAGTATAGCTTTGATGTTGCAATATCAAACGTTGGT
GTAAGGGAAACTGTAAAGCTCATAGGAAGGGACTACTTTGATAGAGATTATCTCAAACAAGTTGATTCCATTGAGCCAAG
CGAGGGGATAAAGTTCAATTTAGCAGTCCCAGGAGAGCCGAGGATTGGTAATACAATAGTCTTTACTCCTGGGTTAATGA
TCAATGGATTTAACGAACCTTCCGCGCTTGATAAGAGCTTAGCTAGAGAGGGGTATACATTAATAATGGCTCACATGGCT
TTGAAAAATGGAAATGTCAAGAAAGCGATAGAAAAAGGCTGGGAGGAGTTATTGGAGATTTTTCCCGAAGGGGAACCTCT
CCTTGCCCAGGTTTATAGAGATGGTAATCCTGTGAATAGGACGAGAGCTGGCCTACATATCGAGTGGCCATTAAATGAAG
TTCTGGTGGTTGGAGATGGGTATAGACCTCCTGGGGGAATAGAGGTGGATGGAATAGCTCTAGGTGTTATGAAAGCTCTT
GAAAAGTTGAACTTGGGTAGCTTTTCGGAATGGTATCTATAG

Upstream 100 bases:

>100_bases
TTCCAATAATAAGGAGTAGACTCGGGTGTAAGATAAGCTCTTCCCTCATAAGGGCAGGACTTATAGACCCATTTGGCAAC
CCAATTAGGAGGGAAGAGAA

Downstream 100 bases:

>100_bases
GTGAAAATTGATGAAGAATAAGTAAGATAGGTATTGCTTCTCTCCATATAGAATTATGTCATGAAGGTTTCCCACTCAGA
AATACCTGTGGTTATCTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYKGFQLSTGALHMIPHGEDGPLAHLLRILGAKVEIVN
SNPKGKILWEGKIFHYRESWKFLSVKEKAKALKLLAEIRMNKLPKEEIPADEWIKEKIGENEFLLSVLESFAGWADSVSL
SDLTALELAKEIRAALRWGGPGLIRGGCKAVIDELERIIMENKGKILTRKEVVEINIEEKKVYTRDNEEYSFDVAISNVG
VRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPRIGNTIVFTPGLMINGFNEPSALDKSLAREGYTLIMAHMA
LKNGNVKKAIEKGWEELLEIFPEGEPLLAQVYRDGNPVNRTRAGLHIEWPLNEVLVVGDGYRPPGGIEVDGIALGVMKAL
EKLNLGSFSEWYL

Sequences:

>Translated_413_residues
MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYKGFQLSTGALHMIPHGEDGPLAHLLRILGAKVEIVN
SNPKGKILWEGKIFHYRESWKFLSVKEKAKALKLLAEIRMNKLPKEEIPADEWIKEKIGENEFLLSVLESFAGWADSVSL
SDLTALELAKEIRAALRWGGPGLIRGGCKAVIDELERIIMENKGKILTRKEVVEINIEEKKVYTRDNEEYSFDVAISNVG
VRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPRIGNTIVFTPGLMINGFNEPSALDKSLAREGYTLIMAHMA
LKNGNVKKAIEKGWEELLEIFPEGEPLLAQVYRDGNPVNRTRAGLHIEWPLNEVLVVGDGYRPPGGIEVDGIALGVMKAL
EKLNLGSFSEWYL
>Mature_413_residues
MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYKGFQLSTGALHMIPHGEDGPLAHLLRILGAKVEIVN
SNPKGKILWEGKIFHYRESWKFLSVKEKAKALKLLAEIRMNKLPKEEIPADEWIKEKIGENEFLLSVLESFAGWADSVSL
SDLTALELAKEIRAALRWGGPGLIRGGCKAVIDELERIIMENKGKILTRKEVVEINIEEKKVYTRDNEEYSFDVAISNVG
VRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPRIGNTIVFTPGLMINGFNEPSALDKSLAREGYTLIMAHMA
LKNGNVKKAIEKGWEELLEIFPEGEPLLAQVYRDGNPVNRTRAGLHIEWPLNEVLVVGDGYRPPGGIEVDGIALGVMKAL
EKLNLGSFSEWYL

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45809; Mature: 45809

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: PS00659 GLYCOSYL_HYDROL_F5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYKGFQLSTGALHMIPHG
CCEEEEECCHHHHHHHHHHHCCCCEEEEEECCCEECCEECCCCCCCEEECCCEEEEEECC
EDGPLAHLLRILGAKVEIVNSNPKGKILWEGKIFHYRESWKFLSVKEKAKALKLLAEIRM
CCCHHHHHHHHHCCEEEEEECCCCCEEEECCEEEEEECCCCEEHHHHHHHHHHHHHHHHH
NKLPKEEIPADEWIKEKIGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALRWGG
HCCCHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PGLIRGGCKAVIDELERIIMENKGKILTRKEVVEINIEEKKVYTRDNEEYSFDVAISNVG
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCEEEECCCCCEEEEEEEECCC
VRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPRIGNTIVFTPGLMINGFNEP
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEECCEEEECCCCC
SALDKSLAREGYTLIMAHMALKNGNVKKAIEKGWEELLEIFPEGEPLLAQVYRDGNPVNR
HHHHHHHHHCCHHEEEEHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC
TRAGLHIEWPLNEVLVVGDGYRPPGGIEVDGIALGVMKALEKLNLGSFSEWYL
CCCCEEEEECCCEEEEEECCCCCCCCEEECHHHHHHHHHHHHCCCCCCHHCCC
>Mature Secondary Structure
MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYKGFQLSTGALHMIPHG
CCEEEEECCHHHHHHHHHHHCCCCEEEEEECCCEECCEECCCCCCCEEECCCEEEEEECC
EDGPLAHLLRILGAKVEIVNSNPKGKILWEGKIFHYRESWKFLSVKEKAKALKLLAEIRM
CCCHHHHHHHHHCCEEEEEECCCCCEEEECCEEEEEECCCCEEHHHHHHHHHHHHHHHHH
NKLPKEEIPADEWIKEKIGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALRWGG
HCCCHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PGLIRGGCKAVIDELERIIMENKGKILTRKEVVEINIEEKKVYTRDNEEYSFDVAISNVG
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCEEEECCCCCEEEEEEEECCC
VRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPRIGNTIVFTPGLMINGFNEP
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEECCEEEECCCCC
SALDKSLAREGYTLIMAHMALKNGNVKKAIEKGWEELLEIFPEGEPLLAQVYRDGNPVNR
HHHHHHHHHCCHHEEEEHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC
TRAGLHIEWPLNEVLVVGDGYRPPGGIEVDGIALGVMKALEKLNLGSFSEWYL
CCCCEEEEECCCEEEEEECCCCCCCCEEECHHHHHHHHHHHHCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]