Click here to switch to the map view.

The map label for this gene is ybgI [C]

Identifier: 18977437

GI number: 18977437

Start: 1017843

End: 1018601

Strand: Reverse

Name: ybgI [C]

Synonym: PF1065

Alternate gene names: 18977437

Gene position: 1018601-1017843 (Counterclockwise)

Preceding gene: 18977439

Following gene: 18977432

Centisome position: 53.38

GC content: 45.59

Gene sequence:

>759_bases
ATGGCTGAGCTGTGGGAGATAGTTTCATTCCTAGATGAATACCTCAAGATTTCTGAATATCCTGACAAATCCAGCAACGG
TTTGCAAGTTGAGGGGAAGGAGGAAGTTAACACGATAGCATTTGCGGTAGATGCATGTTTGGACACAATAGTTAAAGCTA
GGGCCTTCAATGCAGACATGCTCATAGTCCACCATGGCCTAATATGGGGAGGGGTAAAGTACGTGAAGGGGCTTTTTGCA
AAGAGAGTCAAGGAACTTTTGAAGAGCAACATGAACCTCTACGCTGCCCACCTTCCTTTAGATGCTCATCCAGAAGTTGG
AAATAATGCTCAACTCCTTAAGTTACTTGGGCTTGAGCCGAAAGAAAAGTTTGGGGAATACCACGGTGTTATGATTGGAT
ACATTGGGGAGTTCGAGGAGGAAAAACCTCTTCCCTTAATAGCTCAGATGCTTGCGGAAAAGTTACCAGTCGATTATGTG
AAGAGTTATGAATTTGGAGTACAAGAGATAAAGAGGGTCGGAGTTGTCAGTGGTGGAGGAGGATTTGCGGTGGAGGAGGC
AAGTGAAAAGGGCGTTGACCTATTCATAACGGGTGAGTTTACACATGAAGACTACAGAGCGGCAGAAGATTTGAGGCTTA
GCGTGATCGCCGCTGGCCACTACGCCACAGAGACCCTGGGAGTAAAGGCTCTAATGCCAATCTTAAGAGAAAAGTTTGGA
GTGAAGACAATATTCATAGACAGCCCAACTGGGCTATGA

Upstream 100 bases:

>100_bases
AGATATGCCCTAAACCTCTTAAGTCCTGGGAATAATTCCTTCATTGGCTTCACCACTAAAACTTTTTGGTGAAGGATAAA
TAAGTTGTGGAGGTGTAAGA

Downstream 100 bases:

>100_bases
GTGCATTGCGTAGTGTATTAACTCATCCCAGTCCAAGTTTAACTCCAATCCCTCTATTCCAAATATTGTTCCCAGGGTTG
TAAAGATGAAGTACAGGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MAELWEIVSFLDEYLKISEYPDKSSNGLQVEGKEEVNTIAFAVDACLDTIVKARAFNADMLIVHHGLIWGGVKYVKGLFA
KRVKELLKSNMNLYAAHLPLDAHPEVGNNAQLLKLLGLEPKEKFGEYHGVMIGYIGEFEEEKPLPLIAQMLAEKLPVDYV
KSYEFGVQEIKRVGVVSGGGGFAVEEASEKGVDLFITGEFTHEDYRAAEDLRLSVIAAGHYATETLGVKALMPILREKFG
VKTIFIDSPTGL

Sequences:

>Translated_252_residues
MAELWEIVSFLDEYLKISEYPDKSSNGLQVEGKEEVNTIAFAVDACLDTIVKARAFNADMLIVHHGLIWGGVKYVKGLFA
KRVKELLKSNMNLYAAHLPLDAHPEVGNNAQLLKLLGLEPKEKFGEYHGVMIGYIGEFEEEKPLPLIAQMLAEKLPVDYV
KSYEFGVQEIKRVGVVSGGGGFAVEEASEKGVDLFITGEFTHEDYRAAEDLRLSVIAAGHYATETLGVKALMPILREKFG
VKTIFIDSPTGL
>Mature_251_residues
AELWEIVSFLDEYLKISEYPDKSSNGLQVEGKEEVNTIAFAVDACLDTIVKARAFNADMLIVHHGLIWGGVKYVKGLFAK
RVKELLKSNMNLYAAHLPLDAHPEVGNNAQLLKLLGLEPKEKFGEYHGVMIGYIGEFEEEKPLPLIAQMLAEKLPVDYVK
SYEFGVQEIKRVGVVSGGGGFAVEEASEKGVDLFITGEFTHEDYRAAEDLRLSVIAAGHYATETLGVKALMPILREKFGV
KTIFIDSPTGL

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=246, Percent_Identity=37.8048780487805, Blast_Score=150, Evalue=6e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 27849; Mature: 27718

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELWEIVSFLDEYLKISEYPDKSSNGLQVEGKEEVNTIAFAVDACLDTIVKARAFNADM
CHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCE
LIVHHGLIWGGVKYVKGLFAKRVKELLKSNMNLYAAHLPLDAHPEVGNNAQLLKLLGLEP
EEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCC
KEKFGEYHGVMIGYIGEFEEEKPLPLIAQMLAEKLPVDYVKSYEFGVQEIKRVGVVSGGG
HHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCEEECCC
GFAVEEASEKGVDLFITGEFTHEDYRAAEDLRLSVIAAGHYATETLGVKALMPILREKFG
CCEEECCCCCCCEEEEEECCCCHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHHC
VKTIFIDSPTGL
CEEEEECCCCCC
>Mature Secondary Structure 
AELWEIVSFLDEYLKISEYPDKSSNGLQVEGKEEVNTIAFAVDACLDTIVKARAFNADM
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCE
LIVHHGLIWGGVKYVKGLFAKRVKELLKSNMNLYAAHLPLDAHPEVGNNAQLLKLLGLEP
EEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCC
KEKFGEYHGVMIGYIGEFEEEKPLPLIAQMLAEKLPVDYVKSYEFGVQEIKRVGVVSGGG
HHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCEEECCC
GFAVEEASEKGVDLFITGEFTHEDYRAAEDLRLSVIAAGHYATETLGVKALMPILREKFG
CCEEECCCCCCCEEEEEECCCCHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHHC
VKTIFIDSPTGL
CEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]