Click here to switch to the map view.

The map label for this gene is 18977420

Identifier: 18977420

GI number: 18977420

Start: 1000677

End: 1001801

Strand: Reverse

Name: 18977420

Synonym: PF1048

Alternate gene names: NA

Gene position: 1001801-1000677 (Counterclockwise)

Preceding gene: 18977432

Following gene: 18977416

Centisome position: 52.5

GC content: 41.33

Gene sequence:

>1125_bases
ATGGAGCGAAGAAAGCTTGTCTTAATAAGTCTAGATGGAAATGGAGTGTACAACTTTAAATATATGCCATTTTTAAGCGA
GTTAGCAGAAAATGGAGAATATTTTATCGTGGATTCTATATTTCCAACTCTCACAGATCTTGTTCATACCACTGTAATGA
CGGGGGTAGAGCCAAGGATCCATTGGGTTGTAGAGAATGGATATTATGATAGGATAACAGGAGTTAAAGTGAAGTTTTAC
GACTTTAAAGTTGCTTTCAACCCCCATGAGGTGATAAAGGCCCCTCTAATTCAAGATATTTTGAGGCAAAGGGGTGTCAG
AATAGCGAGTGTCTCGGGCTACACCATGCCTCCTTTCAGCAATGTTGATGTGAGAATATACCCCCCATTCTTCTCTTCCG
ACGAGCTTTATAGAAAGCATGGGAGAGATTGGAAAAAGGATTTGTGGGTGTTGAATTCGGCAATTTATCTTTACGAGGAG
TGCAAACCAGATCTTCTCCTTGTTCATTTCGCGTCAATAGACGGGATGCAACATGATTATGGGCCCGAAAGTAAAGATGC
TTTAAAGGCTATAGAGACTGTAGATTCTGCGGTGAGGAGCTTATGGGAAAGATTAAAGGATGAATACGCTTTCATAATAT
TTGCGGATCACGGGCAAGAAGAAGTCCACACCTGGGTAAACCTAAGGGAATATTTGAAAAGGCATGGGATAGAAGTGCTT
AGAGTATCTTCTGGTGGAGGCGTTCACATCTATCTAAAGAATCCAGAAGAGAAAGAGGAGGCTTATCAGCTCTTAAGGAG
AGCTCCAGGAGTGAATGAGATTTTCTTTAGAGAGGATCTTCCTTACCTTAATGTTCCGGTGAGTGGCGACTTAATAGTCT
CTGCCAAGAAGGGTTACTGGTTCTGCCACCATAGGGAGTGTCAGAAGGTAAAGGGAAAAAGCTATTGGGTGAAAGGAATG
CATGGTTCTAGAAATTCCCAGGTCATGAAGGTTCCTCTTATTATTTGGGGGTTAGATGTAAAAAAAGAAGAGGCAACTTT
ATATGACATAGCTCCTACAATCTTGGATTTCTTTGGTGTAGGAAAGAAAGGAGAAATGAAGGGGTCATCCCTTCTTAAAT
CCTAG

Upstream 100 bases:

>100_bases
AATTAAGTTTATGAAGTAAGGCCGTTAAAAAATTATGGCAGATGATGAGCTACTCCCGGCTGAAAGATGATGAACCACCT
ACCGGCTGAGGTTATGGAAA

Downstream 100 bases:

>100_bases
GTAGAAGCCTGCAACAAATGCTGCTCCTCCTGGGAGAATTCCTAATGCTTTCTCTCCCAAGCTCAAGGTTGTTTGGGCAG
CTTCTTTTGTGAGGTTAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Phosphodiesterase; Phosphoglyceromutase/Phosphopentomutase; AP Endonuclease; Nucleotide Pyrophosphatase; Phosphodiesterase/Nucleotide Pyrophosphatase Family Protein; Pyrophosphatase; Phosphonoacetate Hydrolase ; Alkaline Phosphodiesterase I

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MERRKLVLISLDGNGVYNFKYMPFLSELAENGEYFIVDSIFPTLTDLVHTTVMTGVEPRIHWVVENGYYDRITGVKVKFY
DFKVAFNPHEVIKAPLIQDILRQRGVRIASVSGYTMPPFSNVDVRIYPPFFSSDELYRKHGRDWKKDLWVLNSAIYLYEE
CKPDLLLVHFASIDGMQHDYGPESKDALKAIETVDSAVRSLWERLKDEYAFIIFADHGQEEVHTWVNLREYLKRHGIEVL
RVSSGGGVHIYLKNPEEKEEAYQLLRRAPGVNEIFFREDLPYLNVPVSGDLIVSAKKGYWFCHHRECQKVKGKSYWVKGM
HGSRNSQVMKVPLIIWGLDVKKEEATLYDIAPTILDFFGVGKKGEMKGSSLLKS

Sequences:

>Translated_374_residues
MERRKLVLISLDGNGVYNFKYMPFLSELAENGEYFIVDSIFPTLTDLVHTTVMTGVEPRIHWVVENGYYDRITGVKVKFY
DFKVAFNPHEVIKAPLIQDILRQRGVRIASVSGYTMPPFSNVDVRIYPPFFSSDELYRKHGRDWKKDLWVLNSAIYLYEE
CKPDLLLVHFASIDGMQHDYGPESKDALKAIETVDSAVRSLWERLKDEYAFIIFADHGQEEVHTWVNLREYLKRHGIEVL
RVSSGGGVHIYLKNPEEKEEAYQLLRRAPGVNEIFFREDLPYLNVPVSGDLIVSAKKGYWFCHHRECQKVKGKSYWVKGM
HGSRNSQVMKVPLIIWGLDVKKEEATLYDIAPTILDFFGVGKKGEMKGSSLLKS
>Mature_374_residues
MERRKLVLISLDGNGVYNFKYMPFLSELAENGEYFIVDSIFPTLTDLVHTTVMTGVEPRIHWVVENGYYDRITGVKVKFY
DFKVAFNPHEVIKAPLIQDILRQRGVRIASVSGYTMPPFSNVDVRIYPPFFSSDELYRKHGRDWKKDLWVLNSAIYLYEE
CKPDLLLVHFASIDGMQHDYGPESKDALKAIETVDSAVRSLWERLKDEYAFIIFADHGQEEVHTWVNLREYLKRHGIEVL
RVSSGGGVHIYLKNPEEKEEAYQLLRRAPGVNEIFFREDLPYLNVPVSGDLIVSAKKGYWFCHHRECQKVKGKSYWVKGM
HGSRNSQVMKVPLIIWGLDVKKEEATLYDIAPTILDFFGVGKKGEMKGSSLLKS

Specific function: Unknown

COG id: COG1524

COG function: function code R; Uncharacterized proteins of the AP superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43180; Mature: 43180

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERRKLVLISLDGNGVYNFKYMPFLSELAENGEYFIVDSIFPTLTDLVHTTVMTGVEPRI
CCCCEEEEEEECCCCEEEEEECHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCCCEE
HWVVENGYYDRITGVKVKFYDFKVAFNPHEVIKAPLIQDILRQRGVRIASVSGYTMPPFS
EEEEECCCEECEECEEEEEEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
NVDVRIYPPFFSSDELYRKHGRDWKKDLWVLNSAIYLYEECKPDLLLVHFASIDGMQHDY
CCCEEEECCCCCCCHHHHHCCCCHHHHHHHHHHHEEEEECCCCCEEEEEEECCCCCCCCC
GPESKDALKAIETVDSAVRSLWERLKDEYAFIIFADHGQEEVHTWVNLREYLKRHGIEVL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEE
RVSSGGGVHIYLKNPEEKEEAYQLLRRAPGVNEIFFREDLPYLNVPVSGDLIVSAKKGYW
EEECCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCCEEEEECCCEE
FCHHRECQKVKGKSYWVKGMHGSRNSQVMKVPLIIWGLDVKKEEATLYDIAPTILDFFGV
EEECCHHHHCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCEEEHHHHHHHHHHCC
GKKGEMKGSSLLKS
CCCCCCCCHHHCCC
>Mature Secondary Structure
MERRKLVLISLDGNGVYNFKYMPFLSELAENGEYFIVDSIFPTLTDLVHTTVMTGVEPRI
CCCCEEEEEEECCCCEEEEEECHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCCCEE
HWVVENGYYDRITGVKVKFYDFKVAFNPHEVIKAPLIQDILRQRGVRIASVSGYTMPPFS
EEEEECCCEECEECEEEEEEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
NVDVRIYPPFFSSDELYRKHGRDWKKDLWVLNSAIYLYEECKPDLLLVHFASIDGMQHDY
CCCEEEECCCCCCCHHHHHCCCCHHHHHHHHHHHEEEEECCCCCEEEEEEECCCCCCCCC
GPESKDALKAIETVDSAVRSLWERLKDEYAFIIFADHGQEEVHTWVNLREYLKRHGIEVL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEE
RVSSGGGVHIYLKNPEEKEEAYQLLRRAPGVNEIFFREDLPYLNVPVSGDLIVSAKKGYW
EEECCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCCEEEEECCCEE
FCHHRECQKVKGKSYWVKGMHGSRNSQVMKVPLIIWGLDVKKEEATLYDIAPTILDFFGV
EEECCHHHHCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCEEEHHHHHHHHHHCC
GKKGEMKGSSLLKS
CCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA