| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is 18977401
Identifier: 18977401
GI number: 18977401
Start: 984618
End: 985466
Strand: Direct
Name: 18977401
Synonym: PF1029
Alternate gene names: NA
Gene position: 984618-985466 (Clockwise)
Preceding gene: 18977400
Following gene: 18977402
Centisome position: 51.6
GC content: 34.75
Gene sequence:
>849_bases ATGAAAAAAATGTTGCTCCTCTTAATGGTTCTATTTTTCCTTATATCTTCCCCTGTTAGCGCTTCATATATCACAAAGAA CTTCACACTAATTGTATGGAAAGATAACAGTATTACAATTGATCAAACAATTATTCCTCAGGATTATGCAATTCACATTA AGGTTCCTACATTGTCAGATAAGGCCTCTAATATACTAGTTCTCTCTGAGAATGGTACAGTCCTCCCTTATATCTATTCA GAGGGTTATATCACACTTGACGTATCAACCCTAAGGTCTGTAAGAATAGTGTATACAATAGAGAACTTTTCTCATAAAAA GGGGGCTGTATGGTATTTAAATGTCTCACTTGAAGTGCCCGCCACGATAGTTTTTCCAAACGATACTGTTATAGTAAGTG TCTCTGATATACCAATTAAACTTGAGCACAACAAAGTGCTCATTGGACCTGGAAATATAACCATATATTACACCTATGAG TCAATTATAGCTCCTAAAAATAGGGGATTTACAAAATACATATTGATGGGAGTCAGTCTTTTGCTAGTTTTTGTGTTCTT TACTATAAGAAAAGATAGGAAAGAAAGGAAAAAGAAACACTTTGAAGACACCTTAAACAAAATTGCTAAAGAGTATAATT TAAATGACGAAGAAGTAAATGCGCTTAGGTTTTTATTAAGTATGGGAGGAAAAGCCAGCCAGTCTGAGCTTAGGAAAGCG TTAGACCTCCCAAAAACAACGACGTGGAGAATGGTTAAAAGGCTAGAACAAATGGGGCTTATAAAGGTATATAAAGTTGG AAGAGAGAATTGGATTGAGCTCTCGGAGGATATGCAAAAATTAATATAA
Upstream 100 bases:
>100_bases AAAGATGTAAATTTGGGCAGGTATGAAACAGCTTACCTAAGAGTGAGAAGAGCTTCAAAAATTCTAGACTACCTGGTCAG AACTATGGAGGTGTGACAGT
Downstream 100 bases:
>100_bases AGCATGTAGTTTAAAATAACCCATCGTAATATTTAAATTTGTCAATTTCAGAAAGAGCACAAAGGAGGTGATAAAATGGT AAGATATATGGTTACAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MKKMLLLLMVLFFLISSPVSASYITKNFTLIVWKDNSITIDQTIIPQDYAIHIKVPTLSDKASNILVLSENGTVLPYIYS EGYITLDVSTLRSVRIVYTIENFSHKKGAVWYLNVSLEVPATIVFPNDTVIVSVSDIPIKLEHNKVLIGPGNITIYYTYE SIIAPKNRGFTKYILMGVSLLLVFVFFTIRKDRKERKKKHFEDTLNKIAKEYNLNDEEVNALRFLLSMGGKASQSELRKA LDLPKTTTWRMVKRLEQMGLIKVYKVGRENWIELSEDMQKLI
Sequences:
>Translated_282_residues MKKMLLLLMVLFFLISSPVSASYITKNFTLIVWKDNSITIDQTIIPQDYAIHIKVPTLSDKASNILVLSENGTVLPYIYS EGYITLDVSTLRSVRIVYTIENFSHKKGAVWYLNVSLEVPATIVFPNDTVIVSVSDIPIKLEHNKVLIGPGNITIYYTYE SIIAPKNRGFTKYILMGVSLLLVFVFFTIRKDRKERKKKHFEDTLNKIAKEYNLNDEEVNALRFLLSMGGKASQSELRKA LDLPKTTTWRMVKRLEQMGLIKVYKVGRENWIELSEDMQKLI >Mature_282_residues MKKMLLLLMVLFFLISSPVSASYITKNFTLIVWKDNSITIDQTIIPQDYAIHIKVPTLSDKASNILVLSENGTVLPYIYS EGYITLDVSTLRSVRIVYTIENFSHKKGAVWYLNVSLEVPATIVFPNDTVIVSVSDIPIKLEHNKVLIGPGNITIYYTYE SIIAPKNRGFTKYILMGVSLLLVFVFFTIRKDRKERKKKHFEDTLNKIAKEYNLNDEEVNALRFLLSMGGKASQSELRKA LDLPKTTTWRMVKRLEQMGLIKVYKVGRENWIELSEDMQKLI
Specific function: Unknown
COG id: COG2512
COG function: function code S; Uncharacterized membrane-associated protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32406; Mature: 32406
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKMLLLLMVLFFLISSPVSASYITKNFTLIVWKDNSITIDQTIIPQDYAIHIKVPTLSD CHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEEECCCEEEEEEECCCCEEEEEEECCCCC KASNILVLSENGTVLPYIYSEGYITLDVSTLRSVRIVYTIENFSHKKGAVWYLNVSLEVP CCCEEEEECCCCCEEEEEEECCEEEEEHHHCCEEEEEEEEECCCCCCCEEEEEEEEEECC ATIVFPNDTVIVSVSDIPIKLEHNKVLIGPGNITIYYTYESIIAPKNRGFTKYILMGVSL EEEEECCCEEEEEECCCEEEEECCEEEECCCCEEEEEEEEHEECCCCCCHHHHHHHHHHH LLVFVFFTIRKDRKERKKKHFEDTLNKIAKEYNLNDEEVNALRFLLSMGGKASQSELRKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHH LDLPKTTTWRMVKRLEQMGLIKVYKVGRENWIELSEDMQKLI HCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHC >Mature Secondary Structure MKKMLLLLMVLFFLISSPVSASYITKNFTLIVWKDNSITIDQTIIPQDYAIHIKVPTLSD CHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEEECCCEEEEEEECCCCEEEEEEECCCCC KASNILVLSENGTVLPYIYSEGYITLDVSTLRSVRIVYTIENFSHKKGAVWYLNVSLEVP CCCEEEEECCCCCEEEEEEECCEEEEEHHHCCEEEEEEEEECCCCCCCEEEEEEEEEECC ATIVFPNDTVIVSVSDIPIKLEHNKVLIGPGNITIYYTYESIIAPKNRGFTKYILMGVSL EEEEECCCEEEEEECCCEEEEECCEEEECCCCEEEEEEEEHEECCCCCCHHHHHHHHHHH LLVFVFFTIRKDRKERKKKHFEDTLNKIAKEYNLNDEEVNALRFLLSMGGKASQSELRKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHH LDLPKTTTWRMVKRLEQMGLIKVYKVGRENWIELSEDMQKLI HCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA