| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is porB [H]
Identifier: 18977337
GI number: 18977337
Start: 925374
End: 926369
Strand: Reverse
Name: porB [H]
Synonym: PF0965
Alternate gene names: 18977337
Gene position: 926369-925374 (Counterclockwise)
Preceding gene: 18977338
Following gene: 33359530
Centisome position: 48.55
GC content: 46.79
Gene sequence:
>996_bases ATGGCAGTTAGAAAGCCCCCAATAACTACCCGTGAATATTGGGCTCCTGGTCATGCCGCATGTGCAGGTTGTGGGTGTGC TACTGCTCTAAGGTTAGCTACCAAGGCTCTTAGTGAAGCTATGGAAGAGAAATATGGAGATCCAAACGCCTTCGCAATAG CTCACGCAACTGGCTGTATGGAAGTAGTGTCAGCTGTATTCCCATATACAGCATGGAAGGCCCCCTGGATTCACGTAGCT TTTGAAAACGCTGCAGCCGTAGCGAGTGGTATTGAAGCTGCATGGAAGAAGCTTGGAAGGAAAGGTAAGATATTGGCAAT AGGTGGAGATGGTGGTACAGCTGATATAGGACTCCAAGCCCTCTCTGGAATGCTCGAAAGATGGCACAATGTTCTCTACC TTATGTATGACAATGAGGCTTACATGAACACTGGAATTCAGAGGTCTTCATCAACACCATATGGAGCATGGACCACAACT TCACCTCCCGGAAAGTATTCAGTAGGTGAAGACAAGCCAAAGAAGTGGGTAGCACTTATTGCAGCCGCTCATCAAATTCC CTATGTAGCAACTGCAAGCATAGGAAATCCACTTGACTTCGTGAGAAAGATAAAGAAAGCAGGCAAGATTGACGGGCCAG CATTCGTTCAAGTCCTCTGTACTTGTCCGACAGGATGGAGAAGTCCACTGGAAAAAGGCGTTGAGATAGCAAGGCTAGCC ATAGAAACAGGTATATGGCCACTCTTCGAGATTGAAAATGGTGACATCTGGAACATTAAGATACAGCCCCCAGGAGGAGG AGCTAAGGTTTACAAGGAAGGCAACAGAGTCGTTAGAATAGAGTTCAAGAAGCCAATCGAGGAGTACCTCAAGCTCCAAG GAAGATTCAAGCACCTCTTCAAGAGACCAGAGGCCATTGAAGAGCTTAGGAACCAAGTAAAAGCAATGTGGAAAGTCTTA GGAGTTGAAGCAATACTTCCAAGACCCGAGGAGTAG
Upstream 100 bases:
>100_bases GCCCTGGAAATTGCAGAGAAGGCACTCAAGGAAGGTAAAGTTGAGAATCCAATTAACTGGATTGGATTAAGATGGGAACT TGTGAAGTGAGGTGATTGAG
Downstream 100 bases:
>100_bases CCTCTTTTTCCATTATCTTTTTTAACCTATTAATTATTTCCTTTTATTGATGCGAATTGCGATAATGACAAGTGACCCAA GAGTGTACTATTTAGCATCA
Product: pyruvate ferredoxin oxidoreductase subunit beta
Products: NA
Alternate protein names: Pyruvate oxidoreductase beta chain; POR; Pyruvic-ferredoxin oxidoreductase subunit beta [H]
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MAVRKPPITTREYWAPGHAACAGCGCATALRLATKALSEAMEEKYGDPNAFAIAHATGCMEVVSAVFPYTAWKAPWIHVA FENAAAVASGIEAAWKKLGRKGKILAIGGDGGTADIGLQALSGMLERWHNVLYLMYDNEAYMNTGIQRSSSTPYGAWTTT SPPGKYSVGEDKPKKWVALIAAAHQIPYVATASIGNPLDFVRKIKKAGKIDGPAFVQVLCTCPTGWRSPLEKGVEIARLA IETGIWPLFEIENGDIWNIKIQPPGGGAKVYKEGNRVVRIEFKKPIEEYLKLQGRFKHLFKRPEAIEELRNQVKAMWKVL GVEAILPRPEE
Sequences:
>Translated_331_residues MAVRKPPITTREYWAPGHAACAGCGCATALRLATKALSEAMEEKYGDPNAFAIAHATGCMEVVSAVFPYTAWKAPWIHVA FENAAAVASGIEAAWKKLGRKGKILAIGGDGGTADIGLQALSGMLERWHNVLYLMYDNEAYMNTGIQRSSSTPYGAWTTT SPPGKYSVGEDKPKKWVALIAAAHQIPYVATASIGNPLDFVRKIKKAGKIDGPAFVQVLCTCPTGWRSPLEKGVEIARLA IETGIWPLFEIENGDIWNIKIQPPGGGAKVYKEGNRVVRIEFKKPIEEYLKLQGRFKHLFKRPEAIEELRNQVKAMWKVL GVEAILPRPEE >Mature_330_residues AVRKPPITTREYWAPGHAACAGCGCATALRLATKALSEAMEEKYGDPNAFAIAHATGCMEVVSAVFPYTAWKAPWIHVAF ENAAAVASGIEAAWKKLGRKGKILAIGGDGGTADIGLQALSGMLERWHNVLYLMYDNEAYMNTGIQRSSSTPYGAWTTTS PPGKYSVGEDKPKKWVALIAAAHQIPYVATASIGNPLDFVRKIKKAGKIDGPAFVQVLCTCPTGWRSPLEKGVEIARLAI ETGIWPLFEIENGDIWNIKIQPPGGGAKVYKEGNRVVRIEFKKPIEEYLKLQGRFKHLFKRPEAIEELRNQVKAMWKVLG VEAILPRPEE
Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]
COG id: COG1013
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787642, Length=214, Percent_Identity=29.9065420560748, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.1 [H]
Molecular weight: Translated: 36261; Mature: 36130
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVRKPPITTREYWAPGHAACAGCGCATALRLATKALSEAMEEKYGDPNAFAIAHATGCM CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHH EVVSAVFPYTAWKAPWIHVAFENAAAVASGIEAAWKKLGRKGKILAIGGDGGTADIGLQA HHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH LSGMLERWHNVLYLMYDNEAYMNTGIQRSSSTPYGAWTTTSPPGKYSVGEDKPKKWVALI HHHHHHHHCCEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH AAAHQIPYVATASIGNPLDFVRKIKKAGKIDGPAFVQVLCTCPTGWRSPLEKGVEIARLA HHHHHCCEEEECCCCCHHHHHHHHHHCCCCCCHHHHHEEECCCCCHHHHHHHHHHHHHHH IETGIWPLFEIENGDIWNIKIQPPGGGAKVYKEGNRVVRIEFKKPIEEYLKLQGRFKHLF HHHCCCEEEEECCCCEEEEEEECCCCCCHHEECCCEEEEEEEHHHHHHHHHHHHHHHHHH KRPEAIEELRNQVKAMWKVLGVEAILPRPEE CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AVRKPPITTREYWAPGHAACAGCGCATALRLATKALSEAMEEKYGDPNAFAIAHATGCM CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHH EVVSAVFPYTAWKAPWIHVAFENAAAVASGIEAAWKKLGRKGKILAIGGDGGTADIGLQA HHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH LSGMLERWHNVLYLMYDNEAYMNTGIQRSSSTPYGAWTTTSPPGKYSVGEDKPKKWVALI HHHHHHHHCCEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH AAAHQIPYVATASIGNPLDFVRKIKKAGKIDGPAFVQVLCTCPTGWRSPLEKGVEIARLA HHHHHCCEEEECCCCCHHHHHHHHHHCCCCCCHHHHHEEECCCCCHHHHHHHHHHHHHHH IETGIWPLFEIENGDIWNIKIQPPGGGAKVYKEGNRVVRIEFKKPIEEYLKLQGRFKHLF HHHCCCEEEEECCCCEEEEEEECCCCCCHHEECCCEEEEEEEHHHHHHHHHHHHHHHHHH KRPEAIEELRNQVKAMWKVLGVEAILPRPEE CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12622808 [H]