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The map label for this gene is yfbE [C]

Identifier: 18977139

GI number: 18977139

Start: 759691

End: 760785

Strand: Reverse

Name: yfbE [C]

Synonym: PF0767

Alternate gene names: 18977139

Gene position: 760785-759691 (Counterclockwise)

Preceding gene: 18977140

Following gene: 18977138

Centisome position: 39.87

GC content: 46.03

Gene sequence:

>1095_bases
ATGATTCCAATTGCAAAGCCCTTAATCGGAGAAGAGGAGATTAATGCCGTAATTGAAGTCCTAAAGAGCGGGATGCTCGC
CCATGGAAAGGAAGTAGAAGCCTTCGAAAGGGAATTTGCCAGCTACATAGGAGTAAAACACGGAATTGCGGTGGTGAATG
GAACGGCAGCTTTGGATATAGCTTTAAAAGCACTGAAGATAAAGCCAGGAGATGAAATTATAACAACTCCCTTCACGTTC
ATAGCTTCAGCAAATGCTATTCTTTTCCAGGGAGCCAAACCGGTTTTTGCAGATATAGATCCCAAGACGTACAACCTCGA
TCCGGACGAGGTTCTCGAAAAGATAAACGAGAAGACAAAAGCTATAATCGTTGTTCACCTCTACGGACAACCTGCAGACA
TGAAGGCCTTTAAGGAAATAGCTGAGGACTACAAACTATATCTCATCGAGGACTGCGCACAAGCTCACGGAGCTGAGTTT
GAAGGTCAGAAGGTTGGAACCTTCGGAGACATAGCCGCCTTCAGCTTTTATCCAACGAAGAACATGACAACCGGAGAGGG
TGGAATGGTTCTAACTAACGACGATGAACTCGCTCGTAGAGCTAGGCTCATAAGGAACCATGGGCAGACAGAGAAATACC
TTCATGAGGAGCTCGGCTACAACCTTAGAATGACCAATATCGCCGCAGCGCTCGGAAGAGTCCAGCTCAGAAAGCTTGAC
AAATGGAACGAGATTAGAATTGAAAACGCGGAACTATTAACAAAGGGAATAAAGAGGATTAAGGGGTTGACGCCGCCTTA
CGTTGATAAGAGGGTTAAGCACGTCTTTCACCAGTATGTTATAAGGGTTGAAGACGATTTTCCATTAACGAGAGATGAGC
TCAGGGAAAAGTTAATGGAAAAAGGAATAGGAACTGCCGTGCACTATCCCATGCCAGTTCACCACCAGCCCCTCTACCAA
AGGCTCGGCTACTCCAAGGATTGCTGTCCCAATGCGATAGAGGCCAGCAAGAGAGTTCTAAGCTTGCCAGTGCATCCAGC
TGTCAGTAAGGAGGACATAAATTACATAATTAGGACGCTTGAAGAGCTTGGGTGA

Upstream 100 bases:

>100_bases
GCACGTCATCTTTAAGTGTTCTCACTGTGGAAGGGAAGTCAAGATTAAAAAAGAGGATTATCAAAGGTATCTAAGAGAAA
AAGACCTATAGGTGTCCTAA

Downstream 100 bases:

>100_bases
TCCTAATGCTCAGGGTGGGCGTTGTAGGCGTTGGAAACATGGGGTTTCATCACGCAAGGGTCTACTCTGAATTGGCCAGA
GAGGGGAAAGTAGAGCTCGT

Product: pleiotropic regulatory protein degT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MIPIAKPLIGEEEINAVIEVLKSGMLAHGKEVEAFEREFASYIGVKHGIAVVNGTAALDIALKALKIKPGDEIITTPFTF
IASANAILFQGAKPVFADIDPKTYNLDPDEVLEKINEKTKAIIVVHLYGQPADMKAFKEIAEDYKLYLIEDCAQAHGAEF
EGQKVGTFGDIAAFSFYPTKNMTTGEGGMVLTNDDELARRARLIRNHGQTEKYLHEELGYNLRMTNIAAALGRVQLRKLD
KWNEIRIENAELLTKGIKRIKGLTPPYVDKRVKHVFHQYVIRVEDDFPLTRDELREKLMEKGIGTAVHYPMPVHHQPLYQ
RLGYSKDCCPNAIEASKRVLSLPVHPAVSKEDINYIIRTLEELG

Sequences:

>Translated_364_residues
MIPIAKPLIGEEEINAVIEVLKSGMLAHGKEVEAFEREFASYIGVKHGIAVVNGTAALDIALKALKIKPGDEIITTPFTF
IASANAILFQGAKPVFADIDPKTYNLDPDEVLEKINEKTKAIIVVHLYGQPADMKAFKEIAEDYKLYLIEDCAQAHGAEF
EGQKVGTFGDIAAFSFYPTKNMTTGEGGMVLTNDDELARRARLIRNHGQTEKYLHEELGYNLRMTNIAAALGRVQLRKLD
KWNEIRIENAELLTKGIKRIKGLTPPYVDKRVKHVFHQYVIRVEDDFPLTRDELREKLMEKGIGTAVHYPMPVHHQPLYQ
RLGYSKDCCPNAIEASKRVLSLPVHPAVSKEDINYIIRTLEELG
>Mature_364_residues
MIPIAKPLIGEEEINAVIEVLKSGMLAHGKEVEAFEREFASYIGVKHGIAVVNGTAALDIALKALKIKPGDEIITTPFTF
IASANAILFQGAKPVFADIDPKTYNLDPDEVLEKINEKTKAIIVVHLYGQPADMKAFKEIAEDYKLYLIEDCAQAHGAEF
EGQKVGTFGDIAAFSFYPTKNMTTGEGGMVLTNDDELARRARLIRNHGQTEKYLHEELGYNLRMTNIAAALGRVQLRKLD
KWNEIRIENAELLTKGIKRIKGLTPPYVDKRVKHVFHQYVIRVEDDFPLTRDELREKLMEKGIGTAVHYPMPVHHQPLYQ
RLGYSKDCCPNAIEASKRVLSLPVHPAVSKEDINYIIRTLEELG

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=379, Percent_Identity=35.6200527704486, Blast_Score=224, Evalue=6e-60,
Organism=Escherichia coli, GI2367285, Length=377, Percent_Identity=30.5039787798408, Blast_Score=162, Evalue=5e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 40849; Mature: 40849

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPIAKPLIGEEEINAVIEVLKSGMLAHGKEVEAFEREFASYIGVKHGIAVVNGTAALDI
CCCCCCCCCCHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHHHHHHCCEEEEECCHHHHH
ALKALKIKPGDEIITTPFTFIASANAILFQGAKPVFADIDPKTYNLDPDEVLEKINEKTK
HHHHEEECCCCCEEECCHHHHHCCCEEEEECCCCCEECCCCCCCCCCHHHHHHHHCCCCE
AIIVVHLYGQPADMKAFKEIAEDYKLYLIEDCAQAHGAEFEGQKVGTFGDIAAFSFYPTK
EEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEEEECCC
NMTTGEGGMVLTNDDELARRARLIRNHGQTEKYLHEELGYNLRMTNIAAALGRVQLRKLD
CCCCCCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHCCCEEHHHHHHHHHHHHHHHCC
KWNEIRIENAELLTKGIKRIKGLTPPYVDKRVKHVFHQYVIRVEDDFPLTRDELREKLME
CCCCEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHH
KGIGTAVHYPMPVHHQPLYQRLGYSKDCCPNAIEASKRVLSLPVHPAVSKEDINYIIRTL
CCCCCEEECCCCCCCCHHHHHCCCCCCCCCCHHHHHHHEEECCCCCCCCHHHHHHHHHHH
EELG
HHHC
>Mature Secondary Structure
MIPIAKPLIGEEEINAVIEVLKSGMLAHGKEVEAFEREFASYIGVKHGIAVVNGTAALDI
CCCCCCCCCCHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHHHHHHCCEEEEECCHHHHH
ALKALKIKPGDEIITTPFTFIASANAILFQGAKPVFADIDPKTYNLDPDEVLEKINEKTK
HHHHEEECCCCCEEECCHHHHHCCCEEEEECCCCCEECCCCCCCCCCHHHHHHHHCCCCE
AIIVVHLYGQPADMKAFKEIAEDYKLYLIEDCAQAHGAEFEGQKVGTFGDIAAFSFYPTK
EEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEEEECCC
NMTTGEGGMVLTNDDELARRARLIRNHGQTEKYLHEELGYNLRMTNIAAALGRVQLRKLD
CCCCCCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHCCCEEHHHHHHHHHHHHHHHCC
KWNEIRIENAELLTKGIKRIKGLTPPYVDKRVKHVFHQYVIRVEDDFPLTRDELREKLME
CCCCEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHH
KGIGTAVHYPMPVHHQPLYQRLGYSKDCCPNAIEASKRVLSLPVHPAVSKEDINYIIRTL
CCCCCEEECCCCCCCCHHHHHCCCCCCCCCCHHHHHHHEEECCCCCCCCHHHHHHHHHHH
EELG
HHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]