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The map label for this gene is 18976840

Identifier: 18976840

GI number: 18976840

Start: 484575

End: 484982

Strand: Direct

Name: 18976840

Synonym: PF0468

Alternate gene names: NA

Gene position: 484575-484982 (Clockwise)

Preceding gene: 18976834

Following gene: 18976845

Centisome position: 25.39

GC content: 36.76

Gene sequence:

>408_bases
ATGGATAATTTTATATGCCTTATAAAGTTTCCATACAATATGAGAGTTAAAGTTAGGAAGGAACTCTTTGAATATCTTTT
GGATCTCGCAGCCTCTTTTCATCCAAAAGAGTTTGCAGGCCTGCTGAGAGAGAAAAATGGGGTATTTGAGGAGGTTTTAT
TTTTGCCAAAGGGGTTCTTTGGAACAAAGTCGGTATACTTTGATCTAAATCTCTTGCCTCATGATGAAACTATTAAAGGA
ACTGTTCATTCTCATCCCTCTCCTTATCCTTATCCTTCTAAAGCTGATTTGGACTTTTTCTCCAAGTTTGGGGGAGTTCA
CATAATAATAGCATTTCCCTATACTAAGGAAAGTACAAAGGCTTTTAGAAGCGATGGAACAGAATTGGATATTGAAATAG
TCCCCTAG

Upstream 100 bases:

>100_bases
AACTTGATCAATTAACCTCTCTGGGACAGGAATCTCCTCTGTTGTCTCAAACTCGATCCCAAGATCGAGTCTCTCCTCCT
CCATATTCCTCTCGCCAATC

Downstream 100 bases:

>100_bases
ATTTTAGGTTGCATAATTCCTCTCTTTTTGAGCTCTTCATAAGCTTTTCTCAGAACTTCACGGATCTTATATCTTTTATT
AAGACCACCCAACTTCATTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MDNFICLIKFPYNMRVKVRKELFEYLLDLAASFHPKEFAGLLREKNGVFEEVLFLPKGFFGTKSVYFDLNLLPHDETIKG
TVHSHPSPYPYPSKADLDFFSKFGGVHIIIAFPYTKESTKAFRSDGTELDIEIVP

Sequences:

>Translated_135_residues
MDNFICLIKFPYNMRVKVRKELFEYLLDLAASFHPKEFAGLLREKNGVFEEVLFLPKGFFGTKSVYFDLNLLPHDETIKG
TVHSHPSPYPYPSKADLDFFSKFGGVHIIIAFPYTKESTKAFRSDGTELDIEIVP
>Mature_135_residues
MDNFICLIKFPYNMRVKVRKELFEYLLDLAASFHPKEFAGLLREKNGVFEEVLFLPKGFFGTKSVYFDLNLLPHDETIKG
TVHSHPSPYPYPSKADLDFFSKFGGVHIIIAFPYTKESTKAFRSDGTELDIEIVP

Specific function: Unknown

COG id: COG1310

COG function: function code R; Predicted metal-dependent protease of the PAD1/JAB1 superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15527; Mature: 15527

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNFICLIKFPYNMRVKVRKELFEYLLDLAASFHPKEFAGLLREKNGVFEEVLFLPKGFF
CCCEEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHCCCCCC
GTKSVYFDLNLLPHDETIKGTVHSHPSPYPYPSKADLDFFSKFGGVHIIIAFPYTKESTK
CCCEEEEEEEECCCCCCEECEECCCCCCCCCCCCCCCHHHHHCCCEEEEEEECCCCCHHH
AFRSDGTELDIEIVP
HHHCCCCEEEEEEEC
>Mature Secondary Structure
MDNFICLIKFPYNMRVKVRKELFEYLLDLAASFHPKEFAGLLREKNGVFEEVLFLPKGFF
CCCEEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHCCCCCC
GTKSVYFDLNLLPHDETIKGTVHSHPSPYPYPSKADLDFFSKFGGVHIIIAFPYTKESTK
CCCEEEEEEEECCCCCCEECEECCCCCCCCCCCCCCCHHHHHCCCEEEEEEECCCCCHHH
AFRSDGTELDIEIVP
HHHCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA