| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is 18976675
Identifier: 18976675
GI number: 18976675
Start: 318794
End: 319789
Strand: Direct
Name: 18976675
Synonym: PF0303
Alternate gene names: NA
Gene position: 318794-319789 (Clockwise)
Preceding gene: 18976672
Following gene: 18976680
Centisome position: 16.71
GC content: 46.89
Gene sequence:
>996_bases ATGAAGTCGCTGTTTCTTTTAGTTCTCGGAAATACTGAAGTTAGCCTAATCCCAGGAATTAGCGTGGCTGGAGCTACACC TGAGCTCACAAAGTATACGCCTCCTGCTGATGCGGAATACCTCTTTTATGATAAGCCCAAGATAATAGATGCAATCCCAG TTACTCCAGAAGGACATCCCACACCAGCGATAATAACTAAAGCCGCGAGGGAGCTGGCAAATTTCCCCATTTTGGTAGTT AGGGGAGGGACTTATTTAGCCCCAAAGGTTCCTCACGTTCACATTAGTTCCATAGTTGGTAGGGATTTTAGGCGAGAGCC TGCTCTTCCCGAAGCTGGTGAGATAATTGAAAGGGCAAAACTTCTCGGGCAAGAATTGGAGAGAAGTGGAATTGAAGAGC TTGTCATTGGAGAATCCACGCCTGGAGGAACCACAACAGCCCAGGCAATCCTTTGGGCCCTAGGGTACGAGGGGAAGACG AGTTCAGCCTCCCCCAATAATCCTCAGGAGTTGAAGAGAAGAGTCATTGAAGAAGGATTTAGAAGGGCTGGAATAGAGTT TGGTGGGCTTAAGGGGAATTCCTTGGAAGCTCTTCGCCAGTTCGGTGATCCAATGATGGCAACTGTCGTTGGGTTGTCCT TGGGATTTAAGGGTGATGTGGTGTTGGCGGGAGGAACTCAAATGCTTGCAGTAGCTGCAATATTGAAAGGACTTGGAGAG GACTTGAGTAGGTTCATGATAGCCACTACTAGATGGGTTGTTGAGGACAAGAGTGCGACCTTCATTAAAACCGCTAGGGA AATTGGAATAATAAGTTATGCAGCGGACTTGGACTTTTCAAAGAGTGAGTTTAAGGGCCTAAGAGATTATGAAAAGGGAT ACGTGAAGGAGGGAGTTGGTGCAGGAGGAGCTACTTGGCTTGCAGTTAAGGCCGGCTTCTCTCCAGAAGATGTTGTTAGG AAAGTTGAAGAGCTCTACAGAAAGCTAATCTCTTAA
Upstream 100 bases:
>100_bases GAGGAGGTATGCATTCCCATCTTGGAACTTAACTATGTGATACACTCTTGTCATCACAACAATTTTAAAATGAATGGATA AAAAATCCATCGGTGGTTTG
Downstream 100 bases:
>100_bases TTTTCCATTTTAGTGGCTTAAAGAAATAAAAGCTCACAAGTTTCTTATCACCTTTTCCAAATCTTCTAAGTCAAGCATTC CTTCTTCCTTGTCTTCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MKSLFLLVLGNTEVSLIPGISVAGATPELTKYTPPADAEYLFYDKPKIIDAIPVTPEGHPTPAIITKAARELANFPILVV RGGTYLAPKVPHVHISSIVGRDFRREPALPEAGEIIERAKLLGQELERSGIEELVIGESTPGGTTTAQAILWALGYEGKT SSASPNNPQELKRRVIEEGFRRAGIEFGGLKGNSLEALRQFGDPMMATVVGLSLGFKGDVVLAGGTQMLAVAAILKGLGE DLSRFMIATTRWVVEDKSATFIKTAREIGIISYAADLDFSKSEFKGLRDYEKGYVKEGVGAGGATWLAVKAGFSPEDVVR KVEELYRKLIS
Sequences:
>Translated_331_residues MKSLFLLVLGNTEVSLIPGISVAGATPELTKYTPPADAEYLFYDKPKIIDAIPVTPEGHPTPAIITKAARELANFPILVV RGGTYLAPKVPHVHISSIVGRDFRREPALPEAGEIIERAKLLGQELERSGIEELVIGESTPGGTTTAQAILWALGYEGKT SSASPNNPQELKRRVIEEGFRRAGIEFGGLKGNSLEALRQFGDPMMATVVGLSLGFKGDVVLAGGTQMLAVAAILKGLGE DLSRFMIATTRWVVEDKSATFIKTAREIGIISYAADLDFSKSEFKGLRDYEKGYVKEGVGAGGATWLAVKAGFSPEDVVR KVEELYRKLIS >Mature_331_residues MKSLFLLVLGNTEVSLIPGISVAGATPELTKYTPPADAEYLFYDKPKIIDAIPVTPEGHPTPAIITKAARELANFPILVV RGGTYLAPKVPHVHISSIVGRDFRREPALPEAGEIIERAKLLGQELERSGIEELVIGESTPGGTTTAQAILWALGYEGKT SSASPNNPQELKRRVIEEGFRRAGIEFGGLKGNSLEALRQFGDPMMATVVGLSLGFKGDVVLAGGTQMLAVAAILKGLGE DLSRFMIATTRWVVEDKSATFIKTAREIGIISYAADLDFSKSEFKGLRDYEKGYVKEGVGAGGATWLAVKAGFSPEDVVR KVEELYRKLIS
Specific function: Unknown
COG id: COG2038
COG function: function code H; NaMN:DMB phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0284 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y303_PYRFU (Q8U3Z6)
Other databases:
- EMBL: AE009950 - RefSeq: NP_578032.1 - ProteinModelPortal: Q8U3Z6 - EnsemblBacteria: EBPYRT00000005998 - GeneID: 1468138 - GenomeReviews: AE009950_GR - KEGG: pfu:PF0303 - NMPDR: fig|186497.1.peg.309 - GeneTree: EBGT00050000022185 - HOGENOM: HBG497525 - OMA: QMLAVYA - ProtClustDB: PRK04447 - HAMAP: MF_01086 - InterPro: IPR003200 - InterPro: IPR002805 - TIGRFAMs: TIGR00303
Pfam domain/function: PF02277 DBI_PRT; SSF52733 NN:DBI_PRT
EC number: NA
Molecular weight: Translated: 35616; Mature: 35616
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLFLLVLGNTEVSLIPGISVAGATPELTKYTPPADAEYLFYDKPKIIDAIPVTPEGHP CCCEEEEEECCCCEEEECCCEECCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCC TPAIITKAARELANFPILVVRGGTYLAPKVPHVHISSIVGRDFRREPALPEAGEIIERAK CHHHHHHHHHHHHCCCEEEEECCEEECCCCCCCHHHHHHCCHHHCCCCCCHHHHHHHHHH LLGQELERSGIEELVIGESTPGGTTTAQAILWALGYEGKTSSASPNNPQELKRRVIEEGF HHHHHHHHCCCHHEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH RRAGIEFGGLKGNSLEALRQFGDPMMATVVGLSLGFKGDVVLAGGTQMLAVAAILKGLGE HHCCCEECCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHH DLSRFMIATTRWVVEDKSATFIKTAREIGIISYAADLDFSKSEFKGLRDYEKGYVKEGVG HHHHHHHHHHHEEEECCCHHHHHHHHHHCEEEEECCCCCCHHHHHCHHHHHHHHHHHCCC AGGATWLAVKAGFSPEDVVRKVEELYRKLIS CCCCEEEEEECCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKSLFLLVLGNTEVSLIPGISVAGATPELTKYTPPADAEYLFYDKPKIIDAIPVTPEGHP CCCEEEEEECCCCEEEECCCEECCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCC TPAIITKAARELANFPILVVRGGTYLAPKVPHVHISSIVGRDFRREPALPEAGEIIERAK CHHHHHHHHHHHHCCCEEEEECCEEECCCCCCCHHHHHHCCHHHCCCCCCHHHHHHHHHH LLGQELERSGIEELVIGESTPGGTTTAQAILWALGYEGKTSSASPNNPQELKRRVIEEGF HHHHHHHHCCCHHEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH RRAGIEFGGLKGNSLEALRQFGDPMMATVVGLSLGFKGDVVLAGGTQMLAVAAILKGLGE HHCCCEECCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHH DLSRFMIATTRWVVEDKSATFIKTAREIGIISYAADLDFSKSEFKGLRDYEKGYVKEGVG HHHHHHHHHHHEEEECCCHHHHHHHHHHCEEEEECCCCCCHHHHHCHHHHHHHHHHHCCC AGGATWLAVKAGFSPEDVVRKVEELYRKLIS CCCCEEEEEECCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA