| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
Click here to switch to the map view.
The map label for this gene is 18976583
Identifier: 18976583
GI number: 18976583
Start: 228005
End: 228619
Strand: Direct
Name: 18976583
Synonym: PF0211
Alternate gene names: NA
Gene position: 228005-228619 (Clockwise)
Preceding gene: 18976581
Following gene: 18976585
Centisome position: 11.95
GC content: 37.89
Gene sequence:
>615_bases ATGAAGAAGAAGGAGCTTGAAATTATACTTTCCAGAGTTAAAGGATTCAAAAATCCCAAACCTTGGCTAGAGCAATACAA AACTCCCGGAAAGGTAGCATCTACTCTCCTTTGGCTTGCTTATACATTAGGAGATATCAAGGAAAAAATTGTAGCGGACT TGGGTGCGGGAACAGGGGTGTTATCCATTGGTGCGGCTCTGCTTGGAGCAAAAAAGATCTACGCTGTCGAAATTGACGAG GAGGCCGTTAAAATTCTTTTAGAAAATCTTGAAGAGTTCAAAGTTAGAAATGTTGTAGAAGTCAAAGTTTCAGATGTTTC TCAATTCTCTGAGAATGTTGATACTGTTGTTATGAATCCTCCCTTTGGCAGCCAGAGAAAGCATGCAGATAGACCATTTC TAACGAAGGCGTTTGAAGTGAGTGATGTTGTTTATTCTATTCACTTAGCAAAGCCTGAAGTTAGGGATTTTATTCGAAGA TTCTCCCAAGAGCATGGGTTTTTAATTACCCATAAAATAACGGAAGAACTGGTAATTCCTGCTCAGTTCTTCTTTCATAG AAAAAGGTTAGAAAGAATAAAAGTTGATATCTATCGCTTTTCTAGGATTTTTTAA
Upstream 100 bases:
>100_bases CATTACGCTGGTAATGAAGTAAAAATGTCAAGAGTTGTCATAATTTGAGACAGTTATTTCTGTAAAAGTTAAAAAGAGAC AAAACAATTTTTCATCTGTC
Downstream 100 bases:
>100_bases TGTTAAGCCAGGAAGTTAGGCCGACTTGTCTTGTCTTTTGGTATCTGAGGTCTTCCTTTCTGTATCCAAATCCCTCCAAT ATCCTAAGTACCGCTGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MKKKELEIILSRVKGFKNPKPWLEQYKTPGKVASTLLWLAYTLGDIKEKIVADLGAGTGVLSIGAALLGAKKIYAVEIDE EAVKILLENLEEFKVRNVVEVKVSDVSQFSENVDTVVMNPPFGSQRKHADRPFLTKAFEVSDVVYSIHLAKPEVRDFIRR FSQEHGFLITHKITEELVIPAQFFFHRKRLERIKVDIYRFSRIF
Sequences:
>Translated_204_residues MKKKELEIILSRVKGFKNPKPWLEQYKTPGKVASTLLWLAYTLGDIKEKIVADLGAGTGVLSIGAALLGAKKIYAVEIDE EAVKILLENLEEFKVRNVVEVKVSDVSQFSENVDTVVMNPPFGSQRKHADRPFLTKAFEVSDVVYSIHLAKPEVRDFIRR FSQEHGFLITHKITEELVIPAQFFFHRKRLERIKVDIYRFSRIF >Mature_204_residues MKKKELEIILSRVKGFKNPKPWLEQYKTPGKVASTLLWLAYTLGDIKEKIVADLGAGTGVLSIGAALLGAKKIYAVEIDE EAVKILLENLEEFKVRNVVEVKVSDVSQFSENVDTVVMNPPFGSQRKHADRPFLTKAFEVSDVVYSIHLAKPEVRDFIRR FSQEHGFLITHKITEELVIPAQFFFHRKRLERIKVDIYRFSRIF
Specific function: Unknown
COG id: COG2263
COG function: function code J; Predicted RNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI92859575, Length=212, Percent_Identity=42.9245283018868, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17552558, Length=215, Percent_Identity=27.906976744186, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI221512926, Length=210, Percent_Identity=36.6666666666667, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI28574609, Length=210, Percent_Identity=36.6666666666667, Blast_Score=112, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010456 [H]
Pfam domain/function: PF06325 PrmA [H]
EC number: NA
Molecular weight: Translated: 23433; Mature: 23433
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKELEIILSRVKGFKNPKPWLEQYKTPGKVASTLLWLAYTLGDIKEKIVADLGAGTGV CCHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LSIGAALLGAKKIYAVEIDEEAVKILLENLEEFKVRNVVEVKVSDVSQFSENVDTVVMNP HHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHCCCCEEEECC PFGSQRKHADRPFLTKAFEVSDVVYSIHLAKPEVRDFIRRFSQEHGFLITHKITEELVIP CCCCCCCCCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCEEEEEEHHHHHHHH AQFFFHRKRLERIKVDIYRFSRIF HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKKELEIILSRVKGFKNPKPWLEQYKTPGKVASTLLWLAYTLGDIKEKIVADLGAGTGV CCHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LSIGAALLGAKKIYAVEIDEEAVKILLENLEEFKVRNVVEVKVSDVSQFSENVDTVVMNP HHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHCCCCEEEECC PFGSQRKHADRPFLTKAFEVSDVVYSIHLAKPEVRDFIRRFSQEHGFLITHKITEELVIP CCCCCCCCCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCEEEEEEHHHHHHHH AQFFFHRKRLERIKVDIYRFSRIF HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]