| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is 18976562
Identifier: 18976562
GI number: 18976562
Start: 201035
End: 203524
Strand: Direct
Name: 18976562
Synonym: PF0190
Alternate gene names: NA
Gene position: 201035-203524 (Clockwise)
Preceding gene: 18976557
Following gene: 18976563
Centisome position: 10.54
GC content: 44.5
Gene sequence:
>2490_bases ATGAGGAAAAAACTTGTTGGAATATTGACAATATTGGTTGCTTTGGGCATGTTAGTAAGCCCACTTCTAAAGCCAGTAGC AGCAGAGGATCAGAAGGTTCTTAAGATAGCAATGTACTCAGCAACTGGTTCTCTATTTATGGGTGCATGGAACCCAAGTT CAGCAGGTTTCAGAGATGTGTATTCAACTAGAGCTGCAGGGTTGGCCCAGGATGAGGGAGCATACGTTTGGGGTATTGAG GGTGACTACCACCCATACAGATGTACCTTAGTTGAAGGTAAGGAAAATGTAAAGGTACCAGAAACTGCTTTAGTCTTCAA TACAACCACCAAGAAGTGGCAACCTGATCATGCTGGAGAAGTTGCTCCAACCGCGGCTACCTTCAAGTGCCAAAAGATCT ACTTCCACGATGGCCACAAGCTCACAGTTGCTGATGTAATGTACGGCTACTACTGGTCATGGGAGTGGTCAAGCCAAGAT GGAGACCAAGATCCATACTTCGATGCAAACGAGGCTGACTGGAGCGCAGAAGCAATGCAAAAGCTCCTCGGTATTGAGGT TAAGGAAGAAGACGATAATTACTTTGTAGTAACCATCTACCACACCTACACATTCCCACCCTACAAGAAGTATCAATACT GGTACTTCACGCCCTACGCAAGCTATCCATGGCAACTCATTTATGCCATGAGCGAACTTGTTGCCGAGAGCAACAGGGCT AGGTTTGCCAACCAGACTGAAGGTGTAGAATTGTTCTCATTCAGTGAATCTACTGAAGACATTCAACAGATTGATATGCT AACACCTTCTCACGCTAAGAAGGTTGCTGAAATGCTTGAGAAGTTGAAGAATGAGAAGCCAATACCTGACGTTATTAAGG ACTTCATCTATGACGAGCAGGACGAGATTAAGGAATATGACTCCATTATCAACTTTATAAACACTCACAACCACATGTTC ATTTCAACTGGGCCATATCTAATTGATGTCTACAAGCCTGAGAACCTCTATCTAAGGTATGTTAAGTTTGACAAGTGGGT CAAGCCAGAGTTTGCTGAGGACATGTACAACTTTGAGCCATACTTCGATGTTGTAGAGCTTTATGGTATCCAGAACGAGA ACACGATAATTCTTGGTGTAGCAAGTGGAGAGTACGATGTTTCATGGTACTCATTCCCATCATTCACGTTCTCTGGACTT AGTGATGAGCAGAAGAGCAACATTGACATGTACGTTAACATTGGTGGATTCTGGGACATGGTCTGGAACCCAGTGCACGA CAAGGATAATCCATATGTGATTACAGTTGGTGACAAGAAGTACTTCAACCCATTCGCAATTAGAGAGATAAGATTTGCAA TGGAATACCTCATCAACAGAAACTACATCATCCAGAACATCCTCCAGGGTTCAGGTGGACCAATGTACACTCCATGGACA AGTGGTGATACGGTTGCAATCGAGAAGCTACAGCCAGTTGTCGATGCCTTTGGTATCGATGCACAGGGTGACGAAGAGTA TGCTCTCCAGCTAATTGAACAGGCGATGCAAAAGGCCGCTAGAGAGTTAGCTAACATGGGATATGAGCTCAAGAAGGTTA ACGGAAAGTGGTACTTCAACGGAGAGCCAGTTAAGATCGTTGGAATTGGAAGACAAGAAGATGAGAGAAAGGATGAGGCT TACTACATTGCAGAAATCCTTAGAAAGGCTGGATTTGAGGTTGAAGTTAAGATAGTTGACAGAAGAACTGCCAACCAGAT AGTATACCTCTCAGACCCAGCTAACTATGAATGGGGTTATTACACTGAAGGATGGGTAGCAAGTGGAAGCGTTCTCTTCT CAATTAGCAGAATCCTACAGTACTACACCACAGCATGGTTTGGTCCAGGATTCGTAGGTTGGAAGTTCACACCAGAGAAC ACATACAGAGCAACAGTAGAAGAAGTCCTCAAGTATCTTGGAAATGGTGACATTCAGGCAGCTATTGACATGCTTGAACT TGAGTACTACACCACTCCAGACAAGCTTGAACCAATACTTGACTGGACAGCAGATGATATCGGATGGCTTATCTACACAA GCAATTACAAGAACCAGACACTAGACTCTGAAGCTAAGTACTGGGACCTAACTAAGATTGGTGCTGCTATTGGTATCTAC GAGAGCTTCAGAGTCTTTACAGCAGAAACCTGGGAGTTCTTCCCAGTCAACAAGAGAATTAAATTCAGAGTTATGGATCC AGCAGTTGGTCTAGGAAACAGCATCGTTATGAAGAGCGCCTACCTTGCTGAGGCTCCAGAGACACCAACCCAGACTGAGA CTACTACCACCCAGACCACTACAACTCAAACAACCACCACAACCCCATCACCAACCCAGACTCAACCGACTACTACACAA TCTCCAACTGAGACTGGAGGAATCTGTGGACCAGCGATACTTGTTGGTCTCGCAGTAGTTCCACTCCTCCTGAGAAGGTT TAAGAAGTAG
Upstream 100 bases:
>100_bases GTAATCCTTAAATATTGATTCTGATGTATAGAATTATGCCTTGAACCCTATATTTAAACTGAGGCGACATACGTTTGAGA TACCTGGCAGGTGATATGCA
Downstream 100 bases:
>100_bases TTTTTTCTCTCCCTTTTTCTCTTAAAATTTTTGCATGTTCTTTTTGATTTATAACATGCTGCCACTTATTTTTCTTGCCG TTCAAATGTTTATCGAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; ABC-Type Dipeptide/Oligopeptide Transport System; Peptide ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 829; Mature: 829
Protein sequence:
>829_residues MRKKLVGILTILVALGMLVSPLLKPVAAEDQKVLKIAMYSATGSLFMGAWNPSSAGFRDVYSTRAAGLAQDEGAYVWGIE GDYHPYRCTLVEGKENVKVPETALVFNTTTKKWQPDHAGEVAPTAATFKCQKIYFHDGHKLTVADVMYGYYWSWEWSSQD GDQDPYFDANEADWSAEAMQKLLGIEVKEEDDNYFVVTIYHTYTFPPYKKYQYWYFTPYASYPWQLIYAMSELVAESNRA RFANQTEGVELFSFSESTEDIQQIDMLTPSHAKKVAEMLEKLKNEKPIPDVIKDFIYDEQDEIKEYDSIINFINTHNHMF ISTGPYLIDVYKPENLYLRYVKFDKWVKPEFAEDMYNFEPYFDVVELYGIQNENTIILGVASGEYDVSWYSFPSFTFSGL SDEQKSNIDMYVNIGGFWDMVWNPVHDKDNPYVITVGDKKYFNPFAIREIRFAMEYLINRNYIIQNILQGSGGPMYTPWT SGDTVAIEKLQPVVDAFGIDAQGDEEYALQLIEQAMQKAARELANMGYELKKVNGKWYFNGEPVKIVGIGRQEDERKDEA YYIAEILRKAGFEVEVKIVDRRTANQIVYLSDPANYEWGYYTEGWVASGSVLFSISRILQYYTTAWFGPGFVGWKFTPEN TYRATVEEVLKYLGNGDIQAAIDMLELEYYTTPDKLEPILDWTADDIGWLIYTSNYKNQTLDSEAKYWDLTKIGAAIGIY ESFRVFTAETWEFFPVNKRIKFRVMDPAVGLGNSIVMKSAYLAEAPETPTQTETTTTQTTTTQTTTTTPSPTQTQPTTTQ SPTETGGICGPAILVGLAVVPLLLRRFKK
Sequences:
>Translated_829_residues MRKKLVGILTILVALGMLVSPLLKPVAAEDQKVLKIAMYSATGSLFMGAWNPSSAGFRDVYSTRAAGLAQDEGAYVWGIE GDYHPYRCTLVEGKENVKVPETALVFNTTTKKWQPDHAGEVAPTAATFKCQKIYFHDGHKLTVADVMYGYYWSWEWSSQD GDQDPYFDANEADWSAEAMQKLLGIEVKEEDDNYFVVTIYHTYTFPPYKKYQYWYFTPYASYPWQLIYAMSELVAESNRA RFANQTEGVELFSFSESTEDIQQIDMLTPSHAKKVAEMLEKLKNEKPIPDVIKDFIYDEQDEIKEYDSIINFINTHNHMF ISTGPYLIDVYKPENLYLRYVKFDKWVKPEFAEDMYNFEPYFDVVELYGIQNENTIILGVASGEYDVSWYSFPSFTFSGL SDEQKSNIDMYVNIGGFWDMVWNPVHDKDNPYVITVGDKKYFNPFAIREIRFAMEYLINRNYIIQNILQGSGGPMYTPWT SGDTVAIEKLQPVVDAFGIDAQGDEEYALQLIEQAMQKAARELANMGYELKKVNGKWYFNGEPVKIVGIGRQEDERKDEA YYIAEILRKAGFEVEVKIVDRRTANQIVYLSDPANYEWGYYTEGWVASGSVLFSISRILQYYTTAWFGPGFVGWKFTPEN TYRATVEEVLKYLGNGDIQAAIDMLELEYYTTPDKLEPILDWTADDIGWLIYTSNYKNQTLDSEAKYWDLTKIGAAIGIY ESFRVFTAETWEFFPVNKRIKFRVMDPAVGLGNSIVMKSAYLAEAPETPTQTETTTTQTTTTQTTTTTPSPTQTQPTTTQ SPTETGGICGPAILVGLAVVPLLLRRFKK >Mature_829_residues MRKKLVGILTILVALGMLVSPLLKPVAAEDQKVLKIAMYSATGSLFMGAWNPSSAGFRDVYSTRAAGLAQDEGAYVWGIE GDYHPYRCTLVEGKENVKVPETALVFNTTTKKWQPDHAGEVAPTAATFKCQKIYFHDGHKLTVADVMYGYYWSWEWSSQD GDQDPYFDANEADWSAEAMQKLLGIEVKEEDDNYFVVTIYHTYTFPPYKKYQYWYFTPYASYPWQLIYAMSELVAESNRA RFANQTEGVELFSFSESTEDIQQIDMLTPSHAKKVAEMLEKLKNEKPIPDVIKDFIYDEQDEIKEYDSIINFINTHNHMF ISTGPYLIDVYKPENLYLRYVKFDKWVKPEFAEDMYNFEPYFDVVELYGIQNENTIILGVASGEYDVSWYSFPSFTFSGL SDEQKSNIDMYVNIGGFWDMVWNPVHDKDNPYVITVGDKKYFNPFAIREIRFAMEYLINRNYIIQNILQGSGGPMYTPWT SGDTVAIEKLQPVVDAFGIDAQGDEEYALQLIEQAMQKAARELANMGYELKKVNGKWYFNGEPVKIVGIGRQEDERKDEA YYIAEILRKAGFEVEVKIVDRRTANQIVYLSDPANYEWGYYTEGWVASGSVLFSISRILQYYTTAWFGPGFVGWKFTPEN TYRATVEEVLKYLGNGDIQAAIDMLELEYYTTPDKLEPILDWTADDIGWLIYTSNYKNQTLDSEAKYWDLTKIGAAIGIY ESFRVFTAETWEFFPVNKRIKFRVMDPAVGLGNSIVMKSAYLAEAPETPTQTETTTTQTTTTQTTTTTPSPTQTQPTTTQ SPTETGGICGPAILVGLAVVPLLLRRFKK
Specific function: Unknown
COG id: COG3889
COG function: function code R; Predicted solute binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94815; Mature: 94815
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKLVGILTILVALGMLVSPLLKPVAAEDQKVLKIAMYSATGSLFMGAWNPSSAGFRDV CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEECCCCCCCCHHHH YSTRAAGLAQDEGAYVWGIEGDYHPYRCTLVEGKENVKVPETALVFNTTTKKWQPDHAGE HHHHHCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCC VAPTAATFKCQKIYFHDGHKLTVADVMYGYYWSWEWSSQDGDQDPYFDANEADWSAEAMQ CCCCCEEEEEEEEEEECCCEEEEHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHH KLLGIEVKEEDDNYFVVTIYHTYTFPPYKKYQYWYFTPYASYPWQLIYAMSELVAESNRA HHHCCEEEECCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCH RFANQTEGVELFSFSESTEDIQQIDMLTPSHAKKVAEMLEKLKNEKPIPDVIKDFIYDEQ HCCCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCH DEIKEYDSIINFINTHNHMFISTGPYLIDVYKPENLYLRYVKFDKWVKPEFAEDMYNFEP HHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHCCCCC YFDVVELYGIQNENTIILGVASGEYDVSWYSFPSFTFSGLSDEQKSNIDMYVNIGGFWDM HHHHHHHEECCCCCEEEEEEECCCEEEEEEECCCCEECCCCCCCCCCCEEEEEECCEEHH VWNPVHDKDNPYVITVGDKKYFNPFAIREIRFAMEYLINRNYIIQNILQGSGGPMYTPWT HCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEECCCC SGDTVAIEKLQPVVDAFGIDAQGDEEYALQLIEQAMQKAARELANMGYELKKVNGKWYFN CCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEC GEPVKIVGIGRQEDERKDEAYYIAEILRKAGFEVEVKIVDRRTANQIVYLSDPANYEWGY CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCCCCC YTEGWVASGSVLFSISRILQYYTTAWFGPGFVGWKFTPENTYRATVEEVLKYLGNGDIQA CCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCHHH AIDMLELEYYTTPDKLEPILDWTADDIGWLIYTSNYKNQTLDSEAKYWDLTKIGAAIGIY HHEEEEEEEECCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHH ESFRVFTAETWEFFPVNKRIKFRVMDPAVGLGNSIVMKSAYLAEAPETPTQTETTTTQTT HHEEEEEECCEEEEECCCEEEEEEECCCCCCCCHHEEEHHHHHCCCCCCCCCCCCEEEEE TTQTTTTTPSPTQTQPTTTQSPTETGGICGPAILVGLAVVPLLLRRFKK EEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRKKLVGILTILVALGMLVSPLLKPVAAEDQKVLKIAMYSATGSLFMGAWNPSSAGFRDV CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEECCCCCCCCHHHH YSTRAAGLAQDEGAYVWGIEGDYHPYRCTLVEGKENVKVPETALVFNTTTKKWQPDHAGE HHHHHCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCC VAPTAATFKCQKIYFHDGHKLTVADVMYGYYWSWEWSSQDGDQDPYFDANEADWSAEAMQ CCCCCEEEEEEEEEEECCCEEEEHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHH KLLGIEVKEEDDNYFVVTIYHTYTFPPYKKYQYWYFTPYASYPWQLIYAMSELVAESNRA HHHCCEEEECCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCH RFANQTEGVELFSFSESTEDIQQIDMLTPSHAKKVAEMLEKLKNEKPIPDVIKDFIYDEQ HCCCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCH DEIKEYDSIINFINTHNHMFISTGPYLIDVYKPENLYLRYVKFDKWVKPEFAEDMYNFEP HHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHCCCCC YFDVVELYGIQNENTIILGVASGEYDVSWYSFPSFTFSGLSDEQKSNIDMYVNIGGFWDM HHHHHHHEECCCCCEEEEEEECCCEEEEEEECCCCEECCCCCCCCCCCEEEEEECCEEHH VWNPVHDKDNPYVITVGDKKYFNPFAIREIRFAMEYLINRNYIIQNILQGSGGPMYTPWT HCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEECCCC SGDTVAIEKLQPVVDAFGIDAQGDEEYALQLIEQAMQKAARELANMGYELKKVNGKWYFN CCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEC GEPVKIVGIGRQEDERKDEAYYIAEILRKAGFEVEVKIVDRRTANQIVYLSDPANYEWGY CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCCCCC YTEGWVASGSVLFSISRILQYYTTAWFGPGFVGWKFTPENTYRATVEEVLKYLGNGDIQA CCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCHHH AIDMLELEYYTTPDKLEPILDWTADDIGWLIYTSNYKNQTLDSEAKYWDLTKIGAAIGIY HHEEEEEEEECCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHH ESFRVFTAETWEFFPVNKRIKFRVMDPAVGLGNSIVMKSAYLAEAPETPTQTETTTTQTT HHEEEEEECCEEEEECCCEEEEEEECCCCCCCCHHEEEHHHHHCCCCCCCCCCCCEEEEE TTQTTTTTPSPTQTQPTTTQSPTETGGICGPAILVGLAVVPLLLRRFKK EEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA