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The map label for this gene is atpF

Identifier: 18976553

GI number: 18976553

Start: 190326

End: 190637

Strand: Direct

Name: atpF

Synonym: PF0181

Alternate gene names: 18976553

Gene position: 190326-190637 (Clockwise)

Preceding gene: 18976552

Following gene: 18976554

Centisome position: 9.97

GC content: 40.38

Gene sequence:

>312_bases
ATGAAAATAGTTGTAATGGGAGATTCCGACACTGTGGTAGGGTTCAGATTGGCAGGAGTTCACGAAGCCTATGAATATGA
TGAATCTTTGGAATCTGTTGAGAGGGCTAGGAACAAACTTAGGGAGCTTTTGGAAAGAGATGATGTAGGAATTATCCTCA
TAACGGAAAGACTGGCTCAAAGAATTGGTTCCCTTCCCGAAGTTAAATTTCCTATTATCCTTCAAATCCCAGATAAGTTT
GGCTCAATCTATGGGGAGGATATCCTAAGAGATGTTGTAAGAAGAGCAATAGGAGTGGAATTAAAGAGGTGA

Upstream 100 bases:

>100_bases
TTCAAAAGGAAAACGAAATTAGAAAGCTGAAAGCAATAGTTAGGTTGATTGCAGACAGAGTTAGGCCAGAAAGAATTAAG
GAGATAGTGGGTGAAGTTAC

Downstream 100 bases:

>100_bases
ATAAAAATGCCTGCAAAAGGAAGAATAATTAGAGTTACAGGACCATTAGTTATAGCCGATGGCATGAAAGGAGCTAAGAT
GTATGAGGTAGTTAGGGTTG

Product: V-type ATP synthase subunit F

Products: ADP; phosphate; H+

Alternate protein names: V-ATPase subunit F

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MKIVVMGDSDTVVGFRLAGVHEAYEYDESLESVERARNKLRELLERDDVGIILITERLAQRIGSLPEVKFPIILQIPDKF
GSIYGEDILRDVVRRAIGVELKR

Sequences:

>Translated_103_residues
MKIVVMGDSDTVVGFRLAGVHEAYEYDESLESVERARNKLRELLERDDVGIILITERLAQRIGSLPEVKFPIILQIPDKF
GSIYGEDILRDVVRRAIGVELKR
>Mature_103_residues
MKIVVMGDSDTVVGFRLAGVHEAYEYDESLESVERARNKLRELLERDDVGIILITERLAQRIGSLPEVKFPIILQIPDKF
GSIYGEDILRDVVRRAIGVELKR

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG1436

COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the V-ATPase F subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): VATF_PYRFU (Q8U4A7)

Other databases:

- EMBL:   AE009950
- RefSeq:   NP_577910.1
- PDB:   2QAI
- PDBsum:   2QAI
- ProteinModelPortal:   Q8U4A7
- SMR:   Q8U4A7
- EnsemblBacteria:   EBPYRT00000005629
- GeneID:   1468013
- GenomeReviews:   AE009950_GR
- KEGG:   pfu:PF0181
- NMPDR:   fig|186497.1.peg.184
- GeneTree:   EBGT00050000023001
- HOGENOM:   HBG402579
- OMA:   TDVYEVK
- ProtClustDB:   PRK03957
- BRENDA:   3.6.3.14
- HAMAP:   MF_00312
- InterPro:   IPR022944
- InterPro:   IPR008218

Pfam domain/function: PF01990 ATP-synt_F

EC number: 3.6.3.14

Molecular weight: Translated: 11740; Mature: 11740

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVVMGDSDTVVGFRLAGVHEAYEYDESLESVERARNKLRELLERDDVGIILITERLAQ
CEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHH
RIGSLPEVKFPIILQIPDKFGSIYGEDILRDVVRRAIGVELKR
HHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKIVVMGDSDTVVGFRLAGVHEAYEYDESLESVERARNKLRELLERDDVGIILITERLAQ
CEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHH
RIGSLPEVKFPIILQIPDKFGSIYGEDILRDVVRRAIGVELKR
HHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA