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The map label for this gene is atpC

Identifier: 18976552

GI number: 18976552

Start: 189217

End: 190329

Strand: Direct

Name: atpC

Synonym: PF0180

Alternate gene names: 18976552

Gene position: 189217-190329 (Clockwise)

Preceding gene: 33359457

Following gene: 18976553

Centisome position: 9.92

GC content: 36.57

Gene sequence:

>1113_bases
ATGGAGATTTCAACAATAACAATGATTCTAGATACAACATTGGTTGCTGTATTTGCATGGGTAGCCTACAAAACAGGAAG
CTTGATATGGAAGTATACCCCATACTCTTACCCAAATGCAAGAATTAGAGCTATGGAAGCAAGATTACTCTCAGATCAAA
GACTTCTTGAGTTAGCGGAAAGTAAGGAGTTAGAAAATTTTGTTGTCAATCTTGAAGACTCGGATTATGGAAAAAGATTA
AGTGAATTAAAATCATACTCTGTTGAAGAAATTGAAAAAGCTCTCGATTTAAGCTTTGTAGATACTATTCTTCTGTTTCA
AAAAATAATGCCAAAGAGAGTTAGAGGGTTCTTTGAAGTTATGCTCGAAGAGTGGGATGTTAGGAATATTGTAAATGTAG
TTAAGGCTAAAATAACTGGTCTACCAGCTCAAGATTTTGTTATTCCCGTTGGAAAAATTCTAAATAAAGTAAAGGCGATG
GTAGAAGCAAAGACCATGGAGGAAATATTGGTTATCCTAGAGGGCACAGAGTATGAAGAACCTGTAAGAAAACTTATTTT
AAAGGAAATTAACCTGCCTGAGTTTGAGCATCTAATGTATTCCCTGCATTACCAAAAGCTCCTAAATTATGTTAACTCAA
GAAAAGGAGAGGAAAAAGTAATACTTTCTGAGTTTGTATCTTCCCTAATAGACTCAAAGAACATATCTCTAATATTAAGG
GCAAAGGCCTCAGGAATAAACGCCGAAAAGTTGAAGATCATGTTAATCCCAGGAGGGTCAATTAGTAGAAATGTATTGGA
AGCAATGATAAGCGCTGAAGATCCTCTAATGGCCCTAACCGAACTAGAAAAGACAAAGTATGCGGAGGTCGTTAAGAACT
CTAGAGAGGCCGTTGAAAAGGGAGATATAAGTACTGTCGAAAAGCAACTTAGGAGATATATCCAACAAAGAATGAAGGAA
CAGTCACAGTTTTATCCACTAAGCGTCGCCGTGGCATTATCATACATGCTTCAAAAGGAAAACGAAATTAGAAAGCTGAA
AGCAATAGTTAGGTTGATTGCAGACAGAGTTAGGCCAGAAAGAATTAAGGAGATAGTGGGTGAAGTTACATGA

Upstream 100 bases:

>100_bases
CGGAAATATGAGAGTCGATAACACTTTTGAAGCAAGAATGGCTAGACTTGAAAGTGAATTGAGATCTAAAATTGCTGAAA
TACTCTTTGGGTGATCTAAA

Downstream 100 bases:

>100_bases
AAATAGTTGTAATGGGAGATTCCGACACTGTGGTAGGGTTCAGATTGGCAGGAGTTCACGAAGCCTATGAATATGATGAA
TCTTTGGAATCTGTTGAGAG

Product: V-type ATP synthase subunit C

Products: ADP; phosphate; H+

Alternate protein names: V-ATPase subunit C

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MEISTITMILDTTLVAVFAWVAYKTGSLIWKYTPYSYPNARIRAMEARLLSDQRLLELAESKELENFVVNLEDSDYGKRL
SELKSYSVEEIEKALDLSFVDTILLFQKIMPKRVRGFFEVMLEEWDVRNIVNVVKAKITGLPAQDFVIPVGKILNKVKAM
VEAKTMEEILVILEGTEYEEPVRKLILKEINLPEFEHLMYSLHYQKLLNYVNSRKGEEKVILSEFVSSLIDSKNISLILR
AKASGINAEKLKIMLIPGGSISRNVLEAMISAEDPLMALTELEKTKYAEVVKNSREAVEKGDISTVEKQLRRYIQQRMKE
QSQFYPLSVAVALSYMLQKENEIRKLKAIVRLIADRVRPERIKEIVGEVT

Sequences:

>Translated_370_residues
MEISTITMILDTTLVAVFAWVAYKTGSLIWKYTPYSYPNARIRAMEARLLSDQRLLELAESKELENFVVNLEDSDYGKRL
SELKSYSVEEIEKALDLSFVDTILLFQKIMPKRVRGFFEVMLEEWDVRNIVNVVKAKITGLPAQDFVIPVGKILNKVKAM
VEAKTMEEILVILEGTEYEEPVRKLILKEINLPEFEHLMYSLHYQKLLNYVNSRKGEEKVILSEFVSSLIDSKNISLILR
AKASGINAEKLKIMLIPGGSISRNVLEAMISAEDPLMALTELEKTKYAEVVKNSREAVEKGDISTVEKQLRRYIQQRMKE
QSQFYPLSVAVALSYMLQKENEIRKLKAIVRLIADRVRPERIKEIVGEVT
>Mature_370_residues
MEISTITMILDTTLVAVFAWVAYKTGSLIWKYTPYSYPNARIRAMEARLLSDQRLLELAESKELENFVVNLEDSDYGKRL
SELKSYSVEEIEKALDLSFVDTILLFQKIMPKRVRGFFEVMLEEWDVRNIVNVVKAKITGLPAQDFVIPVGKILNKVKAM
VEAKTMEEILVILEGTEYEEPVRKLILKEINLPEFEHLMYSLHYQKLLNYVNSRKGEEKVILSEFVSSLIDSKNISLILR
AKASGINAEKLKIMLIPGGSISRNVLEAMISAEDPLMALTELEKTKYAEVVKNSREAVEKGDISTVEKQLRRYIQQRMKE
QSQFYPLSVAVALSYMLQKENEIRKLKAIVRLIADRVRPERIKEIVGEVT

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG1527

COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the V-ATPase V0D/AC39 subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): VATC_PYRFU (Q8U4A8)

Other databases:

- EMBL:   AE009950
- RefSeq:   NP_577909.1
- ProteinModelPortal:   Q8U4A8
- EnsemblBacteria:   EBPYRT00000005216
- GeneID:   1468012
- GenomeReviews:   AE009950_GR
- KEGG:   pfu:PF0180
- NMPDR:   fig|186497.1.peg.183
- GeneTree:   EBGT00050000023402
- HOGENOM:   HBG726822
- OMA:   EWDVRNI
- ProtClustDB:   PRK01198
- BRENDA:   3.6.3.14
- HAMAP:   MF_00314
- InterPro:   IPR014272
- InterPro:   IPR002843
- TIGRFAMs:   TIGR02923

Pfam domain/function: PF01992 vATP-synt_AC39; SSF103486 ATPase_V0/A0_c/d

EC number: 3.6.3.14

Molecular weight: Translated: 42515; Mature: 42515

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEISTITMILDTTLVAVFAWVAYKTGSLIWKYTPYSYPNARIRAMEARLLSDQRLLELAE
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
SKELENFVVNLEDSDYGKRLSELKSYSVEEIEKALDLSFVDTILLFQKIMPKRVRGFFEV
HHHHHHHEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLEEWDVRNIVNVVKAKITGLPAQDFVIPVGKILNKVKAMVEAKTMEEILVILEGTEYEE
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
PVRKLILKEINLPEFEHLMYSLHYQKLLNYVNSRKGEEKVILSEFVSSLIDSKNISLILR
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEE
AKASGINAEKLKIMLIPGGSISRNVLEAMISAEDPLMALTELEKTKYAEVVKNSREAVEK
ECCCCCCHHHEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GDISTVEKQLRRYIQQRMKEQSQFYPLSVAVALSYMLQKENEIRKLKAIVRLIADRVRPE
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
RIKEIVGEVT
HHHHHHCCCC
>Mature Secondary Structure
MEISTITMILDTTLVAVFAWVAYKTGSLIWKYTPYSYPNARIRAMEARLLSDQRLLELAE
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
SKELENFVVNLEDSDYGKRLSELKSYSVEEIEKALDLSFVDTILLFQKIMPKRVRGFFEV
HHHHHHHEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLEEWDVRNIVNVVKAKITGLPAQDFVIPVGKILNKVKAMVEAKTMEEILVILEGTEYEE
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
PVRKLILKEINLPEFEHLMYSLHYQKLLNYVNSRKGEEKVILSEFVSSLIDSKNISLILR
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEE
AKASGINAEKLKIMLIPGGSISRNVLEAMISAEDPLMALTELEKTKYAEVVKNSREAVEK
ECCCCCCHHHEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GDISTVEKQLRRYIQQRMKEQSQFYPLSVAVALSYMLQKENEIRKLKAIVRLIADRVRPE
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
RIKEIVGEVT
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA