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The map label for this gene is hycB [C]

Identifier: 18976468

GI number: 18976468

Start: 103966

End: 104208

Strand: Direct

Name: hycB [C]

Synonym: PF0096

Alternate gene names: 18976468

Gene position: 103966-104208 (Clockwise)

Preceding gene: 33359448

Following gene: 18976469

Centisome position: 5.45

GC content: 42.8

Gene sequence:

>243_bases
ATGACAACACTGTTGTTCTTGATGAAGATCAAATACTCAGAGGGGAGGGAAATGAAGAAGATTAAGGTTCTTGTAAACGA
AGACAAGTGCTATCTATGTGGGGGATGTGCAGGAGTTTGTCCGGCATTGGCAATAAGGGTCTCATCATCATGGCAGTTCT
TTGAAGATAAGTGCATTTCTTGTATGATATGCATAAAGGCTTGTCCTGTGGGAGCTCTCAGTTATGAGGAGGTGGCACAA
TGA

Upstream 100 bases:

>100_bases
GCAACTGTAGAAGAGTTAAGTGATAGATTAAACTTAAAGGAGCGTGAAGTTAGAGAGAAAATATCTGAGATGGCTCGCTT
TGTTCCAGTAAAGATAATAA

Downstream 100 bases:

>100_bases
AGTACGATGTAGTGGTTGTTGGCTCAGGAGTTGCCGGTCCCATTGTGGCAAGAGACGTTGCAAAAGCTGGTTTTTCAGTT
CTTCTTGTGGATAAAAAACC

Product: hypothetical protein

Products: Oxidized ferredoxin; CO2; H2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MTTLLFLMKIKYSEGREMKKIKVLVNEDKCYLCGGCAGVCPALAIRVSSSWQFFEDKCISCMICIKACPVGALSYEEVAQ

Sequences:

>Translated_80_residues
MTTLLFLMKIKYSEGREMKKIKVLVNEDKCYLCGGCAGVCPALAIRVSSSWQFFEDKCISCMICIKACPVGALSYEEVAQ
>Mature_79_residues
TTLLFLMKIKYSEGREMKKIKVLVNEDKCYLCGGCAGVCPALAIRVSSSWQFFEDKCISCMICIKACPVGALSYEEVAQ

Specific function: Probable Electron Transfer Protein For Hydrogenase 3. [C]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8895; Mature: 8764

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
15.0 %Cys+Met (Translated Protein)
10.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
13.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLLFLMKIKYSEGREMKKIKVLVNEDKCYLCGGCAGVCPALAIRVSSSWQFFEDKCIS
CCCEEEEEEEECCCCCCEEEEEEEECCCCEEEECCHHHHHHHHEEEECCCCCHHHHHHHH
CMICIKACPVGALSYEEVAQ
HHHHHHHCCCCCCCHHHHCC
>Mature Secondary Structure 
TTLLFLMKIKYSEGREMKKIKVLVNEDKCYLCGGCAGVCPALAIRVSSSWQFFEDKCIS
CCEEEEEEEECCCCCCEEEEEEEECCCCEEEECCHHHHHHHHEEEECCCCCHHHHHHHH
CMICIKACPVGALSYEEVAQ
HHHHHHHCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Reduced ferredoxin; H+; formate [C]

Specific reaction: 2 reduced ferredoxin + 2 H+ = 2 oxidized ferredoxin + H2 formate = CO2 + H2 [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA