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The map label for this gene is yraN [C]

Identifier: 189499017

GI number: 189499017

Start: 21181

End: 21561

Strand: Reverse

Name: yraN [C]

Synonym: Cphamn1_0017

Alternate gene names: 189499017

Gene position: 21561-21181 (Counterclockwise)

Preceding gene: 189499018

Following gene: 189499016

Centisome position: 0.79

GC content: 48.82

Gene sequence:

>381_bases
ATGTCTTTTATTCCCCACGACCTCGGACGCCAGGGAGAACATACAGCCGTCACCTTCCTCATAGAAAAAGGGTACCGGAT
TCTCCAGAGAAACTACCGTCACCGACGCAACGAGATAGACATCATCGCCCTGGACAGGCGCACCCTCTGCTTCATTGAAG
TCAAAACAAGATCCTCGGCATCAAAAGGCCATCCGCTTGAAGCCGTTACCCCTGAAAAACAAAAAGAAATAATCAGGGCG
GCAACCGCATATCTTAGCGCATACCCTTCCCCTGAACCCGACTGCAGATTTGATGTTATCGCAATTATCGCGCACGACTT
CACGAATGGCAGAATAAGAGAGTTCAAACTGGAACATATCACCAACGCCTTTATGACGTAA

Upstream 100 bases:

>100_bases
CAAGCGCATATAGCAGCCATTGCCCGATACGGGCGCTGTCCCATTCACAGAACAAGCTTCAGGGTAAAACAACTCGGCGA
AAAGTAAACGGAGCTGAATC

Downstream 100 bases:

>100_bases
CCGCACTATTCACCCAATGACATCAGAACATCAGTTTCGGCGAATGCATGAAGTCTACAGCTCTTCCATACTCTTCTTTT
TCCTTCCGCCTGTCCTCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MSFIPHDLGRQGEHTAVTFLIEKGYRILQRNYRHRRNEIDIIALDRRTLCFIEVKTRSSASKGHPLEAVTPEKQKEIIRA
ATAYLSAYPSPEPDCRFDVIAIIAHDFTNGRIREFKLEHITNAFMT

Sequences:

>Translated_126_residues
MSFIPHDLGRQGEHTAVTFLIEKGYRILQRNYRHRRNEIDIIALDRRTLCFIEVKTRSSASKGHPLEAVTPEKQKEIIRA
ATAYLSAYPSPEPDCRFDVIAIIAHDFTNGRIREFKLEHITNAFMT
>Mature_125_residues
SFIPHDLGRQGEHTAVTFLIEKGYRILQRNYRHRRNEIDIIALDRRTLCFIEVKTRSSASKGHPLEAVTPEKQKEIIRAA
TAYLSAYPSPEPDCRFDVIAIIAHDFTNGRIREFKLEHITNAFMT

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y017_CHLPB (B3EJJ5)

Other databases:

- EMBL:   CP001101
- RefSeq:   YP_001958487.1
- ProteinModelPortal:   B3EJJ5
- GeneID:   6373659
- GenomeReviews:   CP001101_GR
- KEGG:   cpb:Cphamn1_0017
- HOGENOM:   HBG710155
- OMA:   KQRQISK
- ProtClustDB:   PRK12497
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 14583; Mature: 14452

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFIPHDLGRQGEHTAVTFLIEKGYRILQRNYRHRRNEIDIIALDRRTLCFIEVKTRSSA
CCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEEECCCCC
SKGHPLEAVTPEKQKEIIRAATAYLSAYPSPEPDCRFDVIAIIAHDFTNGRIREFKLEHI
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCEEEEHHHHH
TNAFMT
HHHHCC
>Mature Secondary Structure 
SFIPHDLGRQGEHTAVTFLIEKGYRILQRNYRHRRNEIDIIALDRRTLCFIEVKTRSSA
CCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEEECCCCC
SKGHPLEAVTPEKQKEIIRAATAYLSAYPSPEPDCRFDVIAIIAHDFTNGRIREFKLEHI
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCEEEEHHHHH
TNAFMT
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA