| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
Click here to switch to the map view.
The map label for this gene is 189424477
Identifier: 189424477
GI number: 189424477
Start: 1458453
End: 1458947
Strand: Reverse
Name: 189424477
Synonym: Glov_1413
Alternate gene names: NA
Gene position: 1458947-1458453 (Counterclockwise)
Preceding gene: 189424478
Following gene: 189424476
Centisome position: 37.24
GC content: 42.42
Gene sequence:
>495_bases ATGCCTAAGTATACCGGATCTGCCGATGTTTACCGAGAGCTTGTTGAGGATTCCAAAGAAAACTGGTTATACGGGTTAGT GGCATTTGCTGTTGTTGAAGAGCAGCGTATTGAGTGGATGAAGCATTATGAAAGCCAAAACGGAAGAATGCCCGATGACA CCGAAATCAAGAGTTGGTACGAGCAACAACCCGACAGTGTATTGCTGAGAGCCAAAGGCACTGCAGAAAACGCCTTACAA ACCTTTTCTGCTGAAGTGCTTGAAGTGGCAAATGGAGATATTCGCAAGGAAATAGAAGAAAGCGTTGTAATAAGCGAAAT CAAGAAATTGGGGAGTTTTTGGCCGCAATTTGGTGTTAATCTTGCGGGTGGCTTCTGCAGTGCGTTACTTTTTGCAGCAT TTCTAATCGTAATGGCTTTTTTAGTTTTGAATGACACATCACCTGTTGAAATTGGGAAAAAGATCAAACCGCCAATTGAG GAGAAAAAACAATGA
Upstream 100 bases:
>100_bases AGTTGCTGATGCAGACGGTGCTGCGGGAGGCGTTTGATGTGGGGCAACAAGCGGGAACTGTTATTTCTTAATTGTCACAA CTGAACTGAGGAGCGCAACT
Downstream 100 bases:
>100_bases AAAAGTCCGAGGTAACAAGCAAGCGAGCTGCATCAGCTGCATCCACAGTCCTCAGAAGTGAAAGCTCAAGCAAGACGGCC AAATCTGCTGCGGGCTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MPKYTGSADVYRELVEDSKENWLYGLVAFAVVEEQRIEWMKHYESQNGRMPDDTEIKSWYEQQPDSVLLRAKGTAENALQ TFSAEVLEVANGDIRKEIEESVVISEIKKLGSFWPQFGVNLAGGFCSALLFAAFLIVMAFLVLNDTSPVEIGKKIKPPIE EKKQ
Sequences:
>Translated_164_residues MPKYTGSADVYRELVEDSKENWLYGLVAFAVVEEQRIEWMKHYESQNGRMPDDTEIKSWYEQQPDSVLLRAKGTAENALQ TFSAEVLEVANGDIRKEIEESVVISEIKKLGSFWPQFGVNLAGGFCSALLFAAFLIVMAFLVLNDTSPVEIGKKIKPPIE EKKQ >Mature_163_residues PKYTGSADVYRELVEDSKENWLYGLVAFAVVEEQRIEWMKHYESQNGRMPDDTEIKSWYEQQPDSVLLRAKGTAENALQT FSAEVLEVANGDIRKEIEESVVISEIKKLGSFWPQFGVNLAGGFCSALLFAAFLIVMAFLVLNDTSPVEIGKKIKPPIEE KKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18550; Mature: 18419
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKYTGSADVYRELVEDSKENWLYGLVAFAVVEEQRIEWMKHYESQNGRMPDDTEIKSWY CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH EQQPDSVLLRAKGTAENALQTFSAEVLEVANGDIRKEIEESVVISEIKKLGSFWPQFGVN HCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH LAGGFCSALLFAAFLIVMAFLVLNDTSPVEIGKKIKPPIEEKKQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCC >Mature Secondary Structure PKYTGSADVYRELVEDSKENWLYGLVAFAVVEEQRIEWMKHYESQNGRMPDDTEIKSWY CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH EQQPDSVLLRAKGTAENALQTFSAEVLEVANGDIRKEIEESVVISEIKKLGSFWPQFGVN HCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH LAGGFCSALLFAAFLIVMAFLVLNDTSPVEIGKKIKPPIEEKKQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA