| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424465
Identifier: 189424465
GI number: 189424465
Start: 1442684
End: 1443013
Strand: Reverse
Name: 189424465
Synonym: Glov_1401
Alternate gene names: NA
Gene position: 1443013-1442684 (Counterclockwise)
Preceding gene: 189424469
Following gene: 189424458
Centisome position: 36.83
GC content: 44.55
Gene sequence:
>330_bases ATGTCTACAATGAATTTGTGGCAGATTAGCCACAAAAAAGATCTCAACAATGGCGATGTAACGAGATATATTATGAGGTT GCTGCAAAAGCAGGGGATTACGACAAAGCAGGTGGCGAGCGACCTCAACATACCTGTCGAACGGGTACGGAACTGGTATT ATCGGGATACAGGCATGACAGCTCTTGATCTGCTGAGGGTGATGCAGGAATATGAGTTTGTCAGGCAGGCGGTTGAAGGT TCATCGTCGCTTGAATGCGATGAAAAAAGACTACCCTTCAACACAAAGTGCTCCATATGTGCTCCACAAAATAAAAAACT GGTTAGCTAA
Upstream 100 bases:
>100_bases TGGCTTGGAGTATATGCCGTTCCCGTTTGCAGCATTTTCTGCATATCTCCTTGTTACAACACAAAATATTCCTGTAATAC TTTCATCCAACAAGGGGCGT
Downstream 100 bases:
>100_bases TTAGCTAACCAGTTGATTTTATGGTGGGCGCTGCGGGTTTCGAACCTGCGACCCCTGCCGTGTGAAGGCAGTGCTCTCCC GCTGAGCTAAGCGCGCATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MSTMNLWQISHKKDLNNGDVTRYIMRLLQKQGITTKQVASDLNIPVERVRNWYYRDTGMTALDLLRVMQEYEFVRQAVEG SSSLECDEKRLPFNTKCSICAPQNKKLVS
Sequences:
>Translated_109_residues MSTMNLWQISHKKDLNNGDVTRYIMRLLQKQGITTKQVASDLNIPVERVRNWYYRDTGMTALDLLRVMQEYEFVRQAVEG SSSLECDEKRLPFNTKCSICAPQNKKLVS >Mature_108_residues STMNLWQISHKKDLNNGDVTRYIMRLLQKQGITTKQVASDLNIPVERVRNWYYRDTGMTALDLLRVMQEYEFVRQAVEGS SSLECDEKRLPFNTKCSICAPQNKKLVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12688; Mature: 12557
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTMNLWQISHKKDLNNGDVTRYIMRLLQKQGITTKQVASDLNIPVERVRNWYYRDTGMT CCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCC ALDLLRVMQEYEFVRQAVEGSSSLECDEKRLPFNTKCSICAPQNKKLVS HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCC >Mature Secondary Structure STMNLWQISHKKDLNNGDVTRYIMRLLQKQGITTKQVASDLNIPVERVRNWYYRDTGMT CCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCC ALDLLRVMQEYEFVRQAVEGSSSLECDEKRLPFNTKCSICAPQNKKLVS HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA