| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424458
Identifier: 189424458
GI number: 189424458
Start: 1433477
End: 1434934
Strand: Reverse
Name: 189424458
Synonym: Glov_1394
Alternate gene names: NA
Gene position: 1434934-1433477 (Counterclockwise)
Preceding gene: 189424465
Following gene: 189424454
Centisome position: 36.63
GC content: 52.4
Gene sequence:
>1458_bases ATGGCAGACAGCTTGATCAACCAGGATACGTTCTACTTTATAGAGGTGGATCTGCTGTGTACCCGTATGCCGATCACCTG CCCGCCACAGACCGGCTTGATAGAAATGGCCGGCCTGATGCAGCAGCACAACATATCGGGAATCGTGGTGGTTGAAGACG AAAAACCGGTGGGAATTGTTTCACTGCGGGATCTGCGTAATTGTGTTGCCACAGACTATCACGCACTGGCAACACGTACC GTACAGGATCTGATGCAAACAGACCTGATTACCATCAGGCGGCATGATTACCTCTTCAAGGCAATCTTTAAAATGGCCCG TTTCAATATCCACCGTCTGGTGGTTGTAAACGATGATGGCAGCCTGGCAGGCGTTATCACCAACAGTGATCTGCTGAGGA TTCAAAGCCGCTGCCCCCTGTACCTTTCGCAGGAGATTGAAGCGGCTGAAAACTTTGAACAGCTGCAGATGATCAGTACA CGGATCATTGAACTGCTGCAGTTTGTGGTCAAGGCCGGTGCCGACACCCAGAGCCTGATTTCGCTGATATCACATTTTAA TGATCTGATGACACTGCAGGTAATCGCATTACTGGAACGGCTTGAGGCTGTCAGGTTGCCGCGCTCAGCAGCTTTTCTGG TAATGGGCAGCGAGGGACGTGAAGAGCAGACCCTGCGGACTGACCAGGATAACGCCATTGTCTACAGTGATTCTGTATCG ACTGATGAGCTGAAGCAGATCAAACAGTTTGCCAGCCGGGTGGTTGACCGCCTGGAGTTTATCGGCGTGCCCCGCTGCCC CGGAGGGATTATGGCCAGTAATCGCCAGTGGTGCCACAGCATCTCCACCTGGCAGCGCATCACAGCCCGCTGGATCAACA CCCCAACGCTTAAAAACATGGTCAAATTCGGCATGTTTCAGGATCTTCGGGTCATCCACGGCAATCTGTCACTGGGGAAA AAACTGCGGGAACATATTATCACCACCAGTCATCATCATTCCCTGTTCTTCTCCTACATGGCTCACAACATCGTACAGTT CAGTCCGCCACTGGGTCTGTTCGGCCGGATCAAGCTTGAGCATAAAGGTGAGCACAAAGGCAGTCTTGACTTGAAAAAGG CGGGAATCTTTGCCCTGACCCAGGGGGTTAGTCTTTTAACACTGCTACACCGCAGCATGGGTGGTACCACCTGGGACAAA CTGGGCTGGCTACGTCAGGACAGTCAGATTTCCAAAGATGACCTGAACAGCATTGAAGAGGCATTCAGCCTGCTGGTACG GCTACGTCTGATGGTGCAGCTTGATGCCGTTGCAGCCGGAAAGACACCGGACAACTTCTGCGATCCGAGTCTGCTGAGCA ACCGGGAGCAGGAACAGCTGCGCACGGCTTTAAAAGCGGTCAACCTGATGCTGCAGATACTCAAGGACACCTTTCAGCTG GACCTGTTACGAATCTGA
Upstream 100 bases:
>100_bases TTTAAATTTTATGATAAACAGCCGTTACACTCACGTTTCAAGAATATCAACAAAACGTAGCGCAACACTACAAACCGATG TTTATGCAGCGGGAGGCACC
Downstream 100 bases:
>100_bases TCATTTTTTCTGCGGCTCCTGCAGCTTATCCGCCTCGTTTACCCAGCCGCCCCCCATGGCCTTGTAGACGGAGATCAACG ACACCAGCAGGTCATAGTGA
Product: signal-transduction protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 485; Mature: 484
Protein sequence:
>485_residues MADSLINQDTFYFIEVDLLCTRMPITCPPQTGLIEMAGLMQQHNISGIVVVEDEKPVGIVSLRDLRNCVATDYHALATRT VQDLMQTDLITIRRHDYLFKAIFKMARFNIHRLVVVNDDGSLAGVITNSDLLRIQSRCPLYLSQEIEAAENFEQLQMIST RIIELLQFVVKAGADTQSLISLISHFNDLMTLQVIALLERLEAVRLPRSAAFLVMGSEGREEQTLRTDQDNAIVYSDSVS TDELKQIKQFASRVVDRLEFIGVPRCPGGIMASNRQWCHSISTWQRITARWINTPTLKNMVKFGMFQDLRVIHGNLSLGK KLREHIITTSHHHSLFFSYMAHNIVQFSPPLGLFGRIKLEHKGEHKGSLDLKKAGIFALTQGVSLLTLLHRSMGGTTWDK LGWLRQDSQISKDDLNSIEEAFSLLVRLRLMVQLDAVAAGKTPDNFCDPSLLSNREQEQLRTALKAVNLMLQILKDTFQL DLLRI
Sequences:
>Translated_485_residues MADSLINQDTFYFIEVDLLCTRMPITCPPQTGLIEMAGLMQQHNISGIVVVEDEKPVGIVSLRDLRNCVATDYHALATRT VQDLMQTDLITIRRHDYLFKAIFKMARFNIHRLVVVNDDGSLAGVITNSDLLRIQSRCPLYLSQEIEAAENFEQLQMIST RIIELLQFVVKAGADTQSLISLISHFNDLMTLQVIALLERLEAVRLPRSAAFLVMGSEGREEQTLRTDQDNAIVYSDSVS TDELKQIKQFASRVVDRLEFIGVPRCPGGIMASNRQWCHSISTWQRITARWINTPTLKNMVKFGMFQDLRVIHGNLSLGK KLREHIITTSHHHSLFFSYMAHNIVQFSPPLGLFGRIKLEHKGEHKGSLDLKKAGIFALTQGVSLLTLLHRSMGGTTWDK LGWLRQDSQISKDDLNSIEEAFSLLVRLRLMVQLDAVAAGKTPDNFCDPSLLSNREQEQLRTALKAVNLMLQILKDTFQL DLLRI >Mature_484_residues ADSLINQDTFYFIEVDLLCTRMPITCPPQTGLIEMAGLMQQHNISGIVVVEDEKPVGIVSLRDLRNCVATDYHALATRTV QDLMQTDLITIRRHDYLFKAIFKMARFNIHRLVVVNDDGSLAGVITNSDLLRIQSRCPLYLSQEIEAAENFEQLQMISTR IIELLQFVVKAGADTQSLISLISHFNDLMTLQVIALLERLEAVRLPRSAAFLVMGSEGREEQTLRTDQDNAIVYSDSVST DELKQIKQFASRVVDRLEFIGVPRCPGGIMASNRQWCHSISTWQRITARWINTPTLKNMVKFGMFQDLRVIHGNLSLGKK LREHIITTSHHHSLFFSYMAHNIVQFSPPLGLFGRIKLEHKGEHKGSLDLKKAGIFALTQGVSLLTLLHRSMGGTTWDKL GWLRQDSQISKDDLNSIEEAFSLLVRLRLMVQLDAVAAGKTPDNFCDPSLLSNREQEQLRTALKAVNLMLQILKDTFQLD LLRI
Specific function: Unknown
COG id: COG2905
COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001807 - InterPro: IPR000644 - InterPro: IPR016436 - InterPro: IPR005104 - InterPro: IPR011991 [H]
Pfam domain/function: PF00571 CBS; PF03444 DUF293 [H]
EC number: NA
Molecular weight: Translated: 54924; Mature: 54792
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADSLINQDTFYFIEVDLLCTRMPITCPPQTGLIEMAGLMQQHNISGIVVVEDEKPVGIV CCCCCCCCCCEEEEEEEEHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCEE SLRDLRNCVATDYHALATRTVQDLMQTDLITIRRHDYLFKAIFKMARFNIHRLVVVNDDG EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC SLAGVITNSDLLRIQSRCPLYLSQEIEAAENFEQLQMISTRIIELLQFVVKAGADTQSLI CEEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH SLISHFNDLMTLQVIALLERLEAVRLPRSAAFLVMGSEGREEQTLRTDQDNAIVYSDSVS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHCCCCCCCEEEEECCCC TDELKQIKQFASRVVDRLEFIGVPRCPGGIMASNRQWCHSISTWQRITARWINTPTLKNM HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH VKFGMFQDLRVIHGNLSLGKKLREHIITTSHHHSLFFSYMAHNIVQFSPPLGLFGRIKLE HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCCEEEEEEE HKGEHKGSLDLKKAGIFALTQGVSLLTLLHRSMGGTTWDKLGWLRQDSQISKDDLNSIEE ECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHH AFSLLVRLRLMVQLDAVAAGKTPDNFCDPSLLSNREQEQLRTALKAVNLMLQILKDTFQL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH DLLRI HHCCC >Mature Secondary Structure ADSLINQDTFYFIEVDLLCTRMPITCPPQTGLIEMAGLMQQHNISGIVVVEDEKPVGIV CCCCCCCCCEEEEEEEEHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCEE SLRDLRNCVATDYHALATRTVQDLMQTDLITIRRHDYLFKAIFKMARFNIHRLVVVNDDG EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC SLAGVITNSDLLRIQSRCPLYLSQEIEAAENFEQLQMISTRIIELLQFVVKAGADTQSLI CEEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH SLISHFNDLMTLQVIALLERLEAVRLPRSAAFLVMGSEGREEQTLRTDQDNAIVYSDSVS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHCCCCCCCEEEEECCCC TDELKQIKQFASRVVDRLEFIGVPRCPGGIMASNRQWCHSISTWQRITARWINTPTLKNM HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH VKFGMFQDLRVIHGNLSLGKKLREHIITTSHHHSLFFSYMAHNIVQFSPPLGLFGRIKLE HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCCEEEEEEE HKGEHKGSLDLKKAGIFALTQGVSLLTLLHRSMGGTTWDKLGWLRQDSQISKDDLNSIEE ECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHH AFSLLVRLRLMVQLDAVAAGKTPDNFCDPSLLSNREQEQLRTALKAVNLMLQILKDTFQL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH DLLRI HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]