| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424379
Identifier: 189424379
GI number: 189424379
Start: 1359991
End: 1360998
Strand: Reverse
Name: 189424379
Synonym: Glov_1315
Alternate gene names: NA
Gene position: 1360998-1359991 (Counterclockwise)
Preceding gene: 189424388
Following gene: 189424367
Centisome position: 34.74
GC content: 53.57
Gene sequence:
>1008_bases ATGAACAGGCGCATTATTACCTTCTTTGCAGCGGCTATGGTCATGCTTATGGCTGTCTCCGTGCAGGCCAAGGACATCAG GTTCAGTTTCAAGAACGCTCCAGCCGTTGTCTTCAGCCACGACACACACCTTGCAAAGAACAAAGACTGCAAGACCTGCC ACAGCGCAATTTTCAATCTTTCCAAGAAGCGTTCCTATTCCATGGCGGAAATGGAGAAGGGACTTTCCTGCGGAGCCTGC CACAACGGCAAGAAGGCTTTCAGTGTCGCTGTTGAAAAAGACTGCAGTAAATGCCACCGCGGTACCCCCAGCGCCATTAC CTATCGTATCCCTGCCGGCAACGCCGTGTTCAGCCATGACTCACACGTCAACGGCAAAGGGTTCGGCTGCAAGAGCTGTC ACAAAGGTGGTCCGATCCGCCGTGGTGTCAGCATGGCCGAAATGGAAAAAGGTAAATCCTGCGGTTCATGCCACAATGGA AAAACCGCTTTTACTGCCGCTGCAAACTGCGGTTCCTGCCACCGCGGTCTGGCCACAAAGACTCTTAAATACAAGTCAAA GCCTGTTAATGATGCGGTATTCAGTCATGACTTCCACGTACAGGCCTACAAGTGCGGCGACTGTCACACCAAGAAGTACG ACTATCGCCAAGGCTCCCGTAAAGCCAGTATGGCTGACATGGCGAAAGGCAAGTCCTGCGGAAGCTGCCACGATGGCAAA ACCGCCTTCGCTTCAACCGGTGACTGTAACAAGTGTCACGCGGGCTACAAACCGGCCAACCTGACCTTCAAAAACAGCCG CGGTACCGTGGTCGGCTATTTCAGCCATGACTTCCATACCGCTGCGTACAAATGTTCTGACTGCCACACCAAAACCTTCC CTTATGGTGGAGGCAAGCGGATGACCATGGCTGATATGGCCCAGGGCAAATCCTGTGGCGCCTGCCACGACGGCAAGACC GCCTTCTCCGTTAAGGGTGACTGCGCCAAGTGTCATAAAAAGTCCTGA
Upstream 100 bases:
>100_bases AAGGGTGTATGACAACTGTATACAATTATCAATTGACAATCGCCACTATGGCCCTTAAAGTAAGGCGCTTTAAATTTTAT CAGCTTCAAGGGGGATTTCG
Downstream 100 bases:
>100_bases ATCCCCCTCAGGGATACCAGAGCGTAACAGAAAGGCGCTGCCCATAACGGGTAGCGCCTTTCTTGTGATGTTAGCTATTC TGCTCATACAGCAGGCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Cytochrome C; Lipoprotein Cytochrome C
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MNRRIITFFAAAMVMLMAVSVQAKDIRFSFKNAPAVVFSHDTHLAKNKDCKTCHSAIFNLSKKRSYSMAEMEKGLSCGAC HNGKKAFSVAVEKDCSKCHRGTPSAITYRIPAGNAVFSHDSHVNGKGFGCKSCHKGGPIRRGVSMAEMEKGKSCGSCHNG KTAFTAAANCGSCHRGLATKTLKYKSKPVNDAVFSHDFHVQAYKCGDCHTKKYDYRQGSRKASMADMAKGKSCGSCHDGK TAFASTGDCNKCHAGYKPANLTFKNSRGTVVGYFSHDFHTAAYKCSDCHTKTFPYGGGKRMTMADMAQGKSCGACHDGKT AFSVKGDCAKCHKKS
Sequences:
>Translated_335_residues MNRRIITFFAAAMVMLMAVSVQAKDIRFSFKNAPAVVFSHDTHLAKNKDCKTCHSAIFNLSKKRSYSMAEMEKGLSCGAC HNGKKAFSVAVEKDCSKCHRGTPSAITYRIPAGNAVFSHDSHVNGKGFGCKSCHKGGPIRRGVSMAEMEKGKSCGSCHNG KTAFTAAANCGSCHRGLATKTLKYKSKPVNDAVFSHDFHVQAYKCGDCHTKKYDYRQGSRKASMADMAKGKSCGSCHDGK TAFASTGDCNKCHAGYKPANLTFKNSRGTVVGYFSHDFHTAAYKCSDCHTKTFPYGGGKRMTMADMAQGKSCGACHDGKT AFSVKGDCAKCHKKS >Mature_335_residues MNRRIITFFAAAMVMLMAVSVQAKDIRFSFKNAPAVVFSHDTHLAKNKDCKTCHSAIFNLSKKRSYSMAEMEKGLSCGAC HNGKKAFSVAVEKDCSKCHRGTPSAITYRIPAGNAVFSHDSHVNGKGFGCKSCHKGGPIRRGVSMAEMEKGKSCGSCHNG KTAFTAAANCGSCHRGLATKTLKYKSKPVNDAVFSHDFHVQAYKCGDCHTKKYDYRQGSRKASMADMAKGKSCGSCHDGK TAFASTGDCNKCHAGYKPANLTFKNSRGTVVGYFSHDFHTAAYKCSDCHTKTFPYGGGKRMTMADMAQGKSCGACHDGKT AFSVKGDCAKCHKKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36104; Mature: 36104
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 11.0 %Cys+Met (Translated Protein) 7.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 11.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRIITFFAAAMVMLMAVSVQAKDIRFSFKNAPAVVFSHDTHLAKNKDCKTCHSAIFNL CCCEEHHHHHHHHHHHHHHHCEEEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHH SKKRSYSMAEMEKGLSCGACHNGKKAFSVAVEKDCSKCHRGTPSAITYRIPAGNAVFSHD HHHCCCCHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCEEEEEECCCCEEECCC SHVNGKGFGCKSCHKGGPIRRGVSMAEMEKGKSCGSCHNGKTAFTAAANCGSCHRGLATK CCCCCCCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCCCCCCEEEEEECCCCCHHCCHHHH TLKYKSKPVNDAVFSHDFHVQAYKCGDCHTKKYDYRQGSRKASMADMAKGKSCGSCHDGK HHCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC TAFASTGDCNKCHAGYKPANLTFKNSRGTVVGYFSHDFHTAAYKCSDCHTKTFPYGGGKR EEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCE MTMADMAQGKSCGACHDGKTAFSVKGDCAKCHKKS EEHHHHHCCCCCCCCCCCCEEEEECCCHHHHCCCC >Mature Secondary Structure MNRRIITFFAAAMVMLMAVSVQAKDIRFSFKNAPAVVFSHDTHLAKNKDCKTCHSAIFNL CCCEEHHHHHHHHHHHHHHHCEEEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHH SKKRSYSMAEMEKGLSCGACHNGKKAFSVAVEKDCSKCHRGTPSAITYRIPAGNAVFSHD HHHCCCCHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCEEEEEECCCCEEECCC SHVNGKGFGCKSCHKGGPIRRGVSMAEMEKGKSCGSCHNGKTAFTAAANCGSCHRGLATK CCCCCCCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCCCCCCEEEEEECCCCCHHCCHHHH TLKYKSKPVNDAVFSHDFHVQAYKCGDCHTKKYDYRQGSRKASMADMAKGKSCGSCHDGK HHCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC TAFASTGDCNKCHAGYKPANLTFKNSRGTVVGYFSHDFHTAAYKCSDCHTKTFPYGGGKR EEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCE MTMADMAQGKSCGACHDGKTAFSVKGDCAKCHKKS EEHHHHHCCCCCCCCCCCCEEEEECCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA