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The map label for this gene is xcpQ [H]

Identifier: 189424346

GI number: 189424346

Start: 1329460

End: 1331406

Strand: Reverse

Name: xcpQ [H]

Synonym: Glov_1281

Alternate gene names: 189424346

Gene position: 1331406-1329460 (Counterclockwise)

Preceding gene: 189424347

Following gene: 189424345

Centisome position: 33.98

GC content: 55.26

Gene sequence:

>1947_bases
GTGAAACAATTGAAAGCGCTACTGATTGCTCTGTTGCTTATGACGCTCTGCAGCTCGCCGCTCCATGCAGCGGCCCAGGG
GGTGATCATGAACTTCACCGATGTCGAGATCGCCACCATGGTGAAGTTTATCAGCGAGTTGACCGGCAAAAACTTCGTCC
TGGATGAACGGGTAAAGGGCAAGGTCTCTGTCTTCTCCCCTTCAAAGTTGTCGCAGGACGAGGCCTTTGCCCTGTTCACC
TCCGTACTTGAATTAAAAGGATTCACCTTGATACAGGCTGGTAAGGTTTACAAGGTGGTGCCGACCGGCAGCGCCAAACA
GGCCGGTATGAAGCTGGCGGACAAGGAACGGATTCCCCTGGGCGATGCCTTTCTGGCCCGGGTCTTCCCGCTTACCCAGA
TCTCCTCCCAGGAGGCACTGACCTTCCTGCAGCCGATCATTTCAAAGGAAGGGCATATCGGTTCCTTCGGCCCCGGCAAC
ATGCTGCTGGTGGTGGATGCTGCCTCAAACCTGCAAAAGGTGGCCGACATCCTCTCCCTGATCGATACACCGCAGCGACG
CGAAGGGGCAGAACTGGTCTACCTCAAGCACGGTTCTGCAGAAGGGGTCACCAAGGTTCTGCAGGAATGGCTGGCAGGAC
GTGGAGCCCGCCAGGTTGCCGTCGGAACTACCCAGTCAGCAAACAGCGGAGCGGTACAGGTGCTTGCCGACACCCGCCTG
AATGCCGTGCTGCTCTTTGGACCGGAAAAAGACAAGAAAGACATCCGTTCCCTGATCGCCCAGCTGGATGTCACCCCGCC
TGAGGCCAGCAGCAAGATCAATGTCTGCTTCCTAGAAAACACCGATGCCACAGAAATGGCGAAAGTCCTAGATGGCGTGG
TCAAGGGGATCACCGCACAAACCACAACCTTGCAAGCCGGCACCGTCAGTGCGCAAAGCTCCCCCTTTGACTCCGGCAAG
GTCACCATCACGGCTGACAAGGCATCAAACTCGCTGGTCGTCATGGCCTCACCAACCGATTACAACAACCTGCTGCAGGT
GATCAAAAAACTGGACCGCCGCAGCAAGCAGGTCTTCGTGCAGGTCCTGATTGCCGAGATATCTCCGTCAAAATCCAGGG
ACCTTGGTGTCCAAAGTGGCGCCTTTGCTGTCGGGGCACTGGGCAAATATCTGCAGGGAGGCGGTATTTATGACCCCTTT
AACACCTTTGGGAGCCTCCTCGGTTCAGGTAGTAGCACGAGTCCTTTAAGCACCCTGATTGCTGACAAACTGAAAAACAC
ATCAAAGCCGGTTACCGGAGCAGCTATTCTTCAGGCGCTTGAGAGCGAAGGGATGCTTAACATCCTCTCAACCCCCAACA
TCCTGACCACCGACAACAAAGAGGCAGAGATCAATGTGGGGGAAAACGTGCCGTTCAAGTCCTCCAGCACCCAGAGTACC
TTTGGCACAACAGAATCAGTTGAACGCAAGGATATCGGCATCAACCTCAAGATCAAGCCCCAGGTCAGTGAAGGGGATTA
TATCCGCATGGACCTCTATCAGGAAATTTCAGCAGTTAAGAGTGACAAGGGTGACGCGGTGGACCTGGTCACCACCAAGC
GTTCTGCCAAAACCAGTGTGGTGGTCAAGGACAATGAAACCATCGTGATTGGCGGCCTGATCCAGGACACTGAAGACAAC
ACTATCCAGAAAGTGCCGCTGTTGGGTGACATCCCCGGTCTGGGCTGGTTCTTCAAGACCACCACCAAGACCCGCAAGAA
GACCAACCTGCTGATCATGCTGACCCCGCAGGTGGTCAAAGATGCCCGTGACCTGGCAAGCATAACCGAGAGCCAAAAGG
GTAAGTTCACTGAAGCTGCCAAAGAGTTCGGCCCGCTGAATGTGCAGAATGAGATCTCAGGCAAAGCGACCAAGCCGGTA
AGCCAAGGGCAGGAGAGCCGGCCCTGA

Upstream 100 bases:

>100_bases
TGTGACCTTGAAAGGCCAGAGCCGGATCAAGCTTGATCTGATTCGTGACGGCGCCCCCACTTCGCTGGCCTATGATATTC
GCTAACCCTGGAGGTTGTGC

Downstream 100 bases:

>100_bases
TGAGCCCCGAGCACGCCCTGGACAACCTTAAGACTGCGGCTGAGCGCCTGAACCTGCCTTTTCTGGAGCGGATTGACGAC
CAGCAGGCCAACAGCTCGTT

Product: general secretion pathway protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 648; Mature: 648

Protein sequence:

>648_residues
MKQLKALLIALLLMTLCSSPLHAAAQGVIMNFTDVEIATMVKFISELTGKNFVLDERVKGKVSVFSPSKLSQDEAFALFT
SVLELKGFTLIQAGKVYKVVPTGSAKQAGMKLADKERIPLGDAFLARVFPLTQISSQEALTFLQPIISKEGHIGSFGPGN
MLLVVDAASNLQKVADILSLIDTPQRREGAELVYLKHGSAEGVTKVLQEWLAGRGARQVAVGTTQSANSGAVQVLADTRL
NAVLLFGPEKDKKDIRSLIAQLDVTPPEASSKINVCFLENTDATEMAKVLDGVVKGITAQTTTLQAGTVSAQSSPFDSGK
VTITADKASNSLVVMASPTDYNNLLQVIKKLDRRSKQVFVQVLIAEISPSKSRDLGVQSGAFAVGALGKYLQGGGIYDPF
NTFGSLLGSGSSTSPLSTLIADKLKNTSKPVTGAAILQALESEGMLNILSTPNILTTDNKEAEINVGENVPFKSSSTQST
FGTTESVERKDIGINLKIKPQVSEGDYIRMDLYQEISAVKSDKGDAVDLVTTKRSAKTSVVVKDNETIVIGGLIQDTEDN
TIQKVPLLGDIPGLGWFFKTTTKTRKKTNLLIMLTPQVVKDARDLASITESQKGKFTEAAKEFGPLNVQNEISGKATKPV
SQGQESRP

Sequences:

>Translated_648_residues
MKQLKALLIALLLMTLCSSPLHAAAQGVIMNFTDVEIATMVKFISELTGKNFVLDERVKGKVSVFSPSKLSQDEAFALFT
SVLELKGFTLIQAGKVYKVVPTGSAKQAGMKLADKERIPLGDAFLARVFPLTQISSQEALTFLQPIISKEGHIGSFGPGN
MLLVVDAASNLQKVADILSLIDTPQRREGAELVYLKHGSAEGVTKVLQEWLAGRGARQVAVGTTQSANSGAVQVLADTRL
NAVLLFGPEKDKKDIRSLIAQLDVTPPEASSKINVCFLENTDATEMAKVLDGVVKGITAQTTTLQAGTVSAQSSPFDSGK
VTITADKASNSLVVMASPTDYNNLLQVIKKLDRRSKQVFVQVLIAEISPSKSRDLGVQSGAFAVGALGKYLQGGGIYDPF
NTFGSLLGSGSSTSPLSTLIADKLKNTSKPVTGAAILQALESEGMLNILSTPNILTTDNKEAEINVGENVPFKSSSTQST
FGTTESVERKDIGINLKIKPQVSEGDYIRMDLYQEISAVKSDKGDAVDLVTTKRSAKTSVVVKDNETIVIGGLIQDTEDN
TIQKVPLLGDIPGLGWFFKTTTKTRKKTNLLIMLTPQVVKDARDLASITESQKGKFTEAAKEFGPLNVQNEISGKATKPV
SQGQESRP
>Mature_648_residues
MKQLKALLIALLLMTLCSSPLHAAAQGVIMNFTDVEIATMVKFISELTGKNFVLDERVKGKVSVFSPSKLSQDEAFALFT
SVLELKGFTLIQAGKVYKVVPTGSAKQAGMKLADKERIPLGDAFLARVFPLTQISSQEALTFLQPIISKEGHIGSFGPGN
MLLVVDAASNLQKVADILSLIDTPQRREGAELVYLKHGSAEGVTKVLQEWLAGRGARQVAVGTTQSANSGAVQVLADTRL
NAVLLFGPEKDKKDIRSLIAQLDVTPPEASSKINVCFLENTDATEMAKVLDGVVKGITAQTTTLQAGTVSAQSSPFDSGK
VTITADKASNSLVVMASPTDYNNLLQVIKKLDRRSKQVFVQVLIAEISPSKSRDLGVQSGAFAVGALGKYLQGGGIYDPF
NTFGSLLGSGSSTSPLSTLIADKLKNTSKPVTGAAILQALESEGMLNILSTPNILTTDNKEAEINVGENVPFKSSSTQST
FGTTESVERKDIGINLKIKPQVSEGDYIRMDLYQEISAVKSDKGDAVDLVTTKRSAKTSVVVKDNETIVIGGLIQDTEDN
TIQKVPLLGDIPGLGWFFKTTTKTRKKTNLLIMLTPQVVKDARDLASITESQKGKFTEAAKEFGPLNVQNEISGKATKPV
SQGQESRP

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG1450

COG function: function code NU; Type II secretory pathway, component PulD

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI87082242, Length=657, Percent_Identity=30.7458143074581, Blast_Score=270, Evalue=1e-73,
Organism=Escherichia coli, GI1789793, Length=308, Percent_Identity=28.2467532467532, Blast_Score=100, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR004846
- InterPro:   IPR013356
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N [H]

EC number: NA

Molecular weight: Translated: 69238; Mature: 69238

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLKALLIALLLMTLCSSPLHAAAQGVIMNFTDVEIATMVKFISELTGKNFVLDERVKG
CHHHHHHHHHHHHHHHCCCCHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCC
KVSVFSPSKLSQDEAFALFTSVLELKGFTLIQAGKVYKVVPTGSAKQAGMKLADKERIPL
EEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCHHHCCCCCCCCCCCC
GDAFLARVFPLTQISSQEALTFLQPIISKEGHIGSFGPGNMLLVVDAASNLQKVADILSL
CHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHH
IDTPQRREGAELVYLKHGSAEGVTKVLQEWLAGRGARQVAVGTTQSANSGAVQVLADTRL
HCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCC
NAVLLFGPEKDKKDIRSLIAQLDVTPPEASSKINVCFLENTDATEMAKVLDGVVKGITAQ
CEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCC
TTTLQAGTVSAQSSPFDSGKVTITADKASNSLVVMASPTDYNNLLQVIKKLDRRSKQVFV
EEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
QVLIAEISPSKSRDLGVQSGAFAVGALGKYLQGGGIYDPFNTFGSLLGSGSSTSPLSTLI
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHH
ADKLKNTSKPVTGAAILQALESEGMLNILSTPNILTTDNKEAEINVGENVPFKSSSTQST
HHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCEEECCCCCEEEECCCCCCCCCCCCCCC
FGTTESVERKDIGINLKIKPQVSEGDYIRMDLYQEISAVKSDKGDAVDLVTTKRSAKTSV
CCCCCCCCHHCCCEEEEECCCCCCCCEEEHHHHHHHHHHHCCCCCEEEEEEECCCCCEEE
VVKDNETIVIGGLIQDTEDNTIQKVPLLGDIPGLGWFFKTTTKTRKKTNLLIMLTPQVVK
EEECCCEEEEEEEEECCCCCCEEECCCEECCCCCCEEEECCCCCCCCCCEEEEECHHHHH
DARDLASITESQKGKFTEAAKEFGPLNVQNEISGKATKPVSQGQESRP
HHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure
MKQLKALLIALLLMTLCSSPLHAAAQGVIMNFTDVEIATMVKFISELTGKNFVLDERVKG
CHHHHHHHHHHHHHHHCCCCHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCC
KVSVFSPSKLSQDEAFALFTSVLELKGFTLIQAGKVYKVVPTGSAKQAGMKLADKERIPL
EEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCHHHCCCCCCCCCCCC
GDAFLARVFPLTQISSQEALTFLQPIISKEGHIGSFGPGNMLLVVDAASNLQKVADILSL
CHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHH
IDTPQRREGAELVYLKHGSAEGVTKVLQEWLAGRGARQVAVGTTQSANSGAVQVLADTRL
HCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCC
NAVLLFGPEKDKKDIRSLIAQLDVTPPEASSKINVCFLENTDATEMAKVLDGVVKGITAQ
CEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCC
TTTLQAGTVSAQSSPFDSGKVTITADKASNSLVVMASPTDYNNLLQVIKKLDRRSKQVFV
EEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
QVLIAEISPSKSRDLGVQSGAFAVGALGKYLQGGGIYDPFNTFGSLLGSGSSTSPLSTLI
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHH
ADKLKNTSKPVTGAAILQALESEGMLNILSTPNILTTDNKEAEINVGENVPFKSSSTQST
HHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCEEECCCCCEEEECCCCCCCCCCCCCCC
FGTTESVERKDIGINLKIKPQVSEGDYIRMDLYQEISAVKSDKGDAVDLVTTKRSAKTSV
CCCCCCCCHHCCCEEEEECCCCCCCCEEEHHHHHHHHHHHCCCCCEEEEEEECCCCCEEE
VVKDNETIVIGGLIQDTEDNTIQKVPLLGDIPGLGWFFKTTTKTRKKTNLLIMLTPQVVK
EEECCCEEEEEEEEECCCCCCEEECCCEECCCCCCEEEECCCCCCCCCCEEEEECHHHHH
DARDLASITESQKGKFTEAAKEFGPLNVQNEISGKATKPVSQGQESRP
HHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934833; 10984043 [H]