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The map label for this gene is yoaR [H]

Identifier: 189424292

GI number: 189424292

Start: 1274018

End: 1274779

Strand: Reverse

Name: yoaR [H]

Synonym: Glov_1227

Alternate gene names: 189424292

Gene position: 1274779-1274018 (Counterclockwise)

Preceding gene: 189424293

Following gene: 189424291

Centisome position: 32.54

GC content: 60.37

Gene sequence:

>762_bases
ATGGCGACCATGAAGAGCATTCCGGCCCTCTTCCTGTTCCTGCTGTTTTTCTCCATCAGCCAGTCAGCCCTGGCTGCCGA
TGATGCCTTCAGCCATATCTGGGGCGGCTTCAGCACCTCACTGCAGCTTCGCTCAGACCAGCAACGCCACAACACCGCCA
CTGCAGCCCGCGACCTGGATCGCGTGATTATTGCACCGGGTGAGACCTTCAGCTTTAACGAGCGGGTCGGTGCACGGGAC
ACAGGCAAAGGCTATCGCGCTGCGCCGATCATCACTGCAACCGGCCTGCTGCAGGATATCCCCGGCGGCGGCATCTGCCA
GCTGGCCTCTACCATCTACAATGCCGGACTTCTGGCTGGGATGCAGGTGGTGGAACGGCACCCCCACTCCCGCACTGTTG
GTCATGTACCACCGGGCCGGGATGCCACCATCGCCTCCTGGCGCAAAGACCTGAAACTGAAAAACCCCCACCCCTACCCG
CTGCAACTGCGCATTGCCCTGAACCAGAACCGTCTGACCACCTCATTGTACGGACCGGTTGAGAAGCCGTTTTCCGTAGA
GCTGAATGTCAGCCAGACCAGACTGGTGCCGGATACGGTTGTGGTTACCGCTACTGCCCATGCCCCGCAACAACAGGGGG
CCAGCGGCTTTTCCACCGAGACCAGAAGGATCATTAAGGAAAACGGACAAGTGCGGGATGAGCTGATCTCCCAGGACATC
TATCCGGCCCCCAGCCGGGTGATGGCAGGGGACAGTCCATGA

Upstream 100 bases:

>100_bases
CAAACAGGGGATGCTGCTTTCAAATCAGGTCTTCGTGCGCTTTCTCTAAACTATGCTATAAGATCTTCATGATCCCCAAT
CTCCGCACCACATACCGGAA

Downstream 100 bases:

>100_bases
AAAACAGGTTGCTGCTGATCTGTCTGTTCTTCTGCCTGCTGGTACTGCCTGCTTCTGGCGCAACCTTCAGCCAGCCGGAC
CAGACCGCCCTGCTGGAGTA

Product: van Willebrand factor A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MATMKSIPALFLFLLFFSISQSALAADDAFSHIWGGFSTSLQLRSDQQRHNTATAARDLDRVIIAPGETFSFNERVGARD
TGKGYRAAPIITATGLLQDIPGGGICQLASTIYNAGLLAGMQVVERHPHSRTVGHVPPGRDATIASWRKDLKLKNPHPYP
LQLRIALNQNRLTTSLYGPVEKPFSVELNVSQTRLVPDTVVVTATAHAPQQQGASGFSTETRRIIKENGQVRDELISQDI
YPAPSRVMAGDSP

Sequences:

>Translated_253_residues
MATMKSIPALFLFLLFFSISQSALAADDAFSHIWGGFSTSLQLRSDQQRHNTATAARDLDRVIIAPGETFSFNERVGARD
TGKGYRAAPIITATGLLQDIPGGGICQLASTIYNAGLLAGMQVVERHPHSRTVGHVPPGRDATIASWRKDLKLKNPHPYP
LQLRIALNQNRLTTSLYGPVEKPFSVELNVSQTRLVPDTVVVTATAHAPQQQGASGFSTETRRIIKENGQVRDELISQDI
YPAPSRVMAGDSP
>Mature_252_residues
ATMKSIPALFLFLLFFSISQSALAADDAFSHIWGGFSTSLQLRSDQQRHNTATAARDLDRVIIAPGETFSFNERVGARDT
GKGYRAAPIITATGLLQDIPGGGICQLASTIYNAGLLAGMQVVERHPHSRTVGHVPPGRDATIASWRKDLKLKNPHPYPL
QLRIALNQNRLTTSLYGPVEKPFSVELNVSQTRLVPDTVVVTATAHAPQQQGASGFSTETRRIIKENGQVRDELISQDIY
PAPSRVMAGDSP

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022029
- InterPro:   IPR007391 [H]

Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 27485; Mature: 27353

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATMKSIPALFLFLLFFSISQSALAADDAFSHIWGGFSTSLQLRSDQQRHNTATAARDLD
CCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCC
RVIIAPGETFSFNERVGARDTGKGYRAAPIITATGLLQDIPGGGICQLASTIYNAGLLAG
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHH
MQVVERHPHSRTVGHVPPGRDATIASWRKDLKLKNPHPYPLQLRIALNQNRLTTSLYGPV
HHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEEECCCC
EKPFSVELNVSQTRLVPDTVVVTATAHAPQQQGASGFSTETRRIIKENGQVRDELISQDI
CCCEEEEEECCHHEECCCEEEEEEECCCCHHCCCCCCCHHHHHHHHHCCHHHHHHHHCCC
YPAPSRVMAGDSP
CCCCCCCCCCCCC
>Mature Secondary Structure 
ATMKSIPALFLFLLFFSISQSALAADDAFSHIWGGFSTSLQLRSDQQRHNTATAARDLD
CCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCC
RVIIAPGETFSFNERVGARDTGKGYRAAPIITATGLLQDIPGGGICQLASTIYNAGLLAG
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHH
MQVVERHPHSRTVGHVPPGRDATIASWRKDLKLKNPHPYPLQLRIALNQNRLTTSLYGPV
HHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEEECCCC
EKPFSVELNVSQTRLVPDTVVVTATAHAPQQQGASGFSTETRRIIKENGQVRDELISQDI
CCCEEEEEECCHHEECCCEEEEEEECCCCHHCCCCCCCHHHHHHHHHCCHHHHHHHHCCC
YPAPSRVMAGDSP
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]