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The map label for this gene is nusB

Identifier: 189424280

GI number: 189424280

Start: 1261880

End: 1262308

Strand: Reverse

Name: nusB

Synonym: Glov_1215

Alternate gene names: 189424280

Gene position: 1262308-1261880 (Counterclockwise)

Preceding gene: 189424281

Following gene: 189424279

Centisome position: 32.22

GC content: 59.21

Gene sequence:

>429_bases
ATGGGACTTCGTCGCGAAGCACGTGAACTGGCGCTGCAGATGCTCTACGCACAGGATACCCTGCAGGGCAGCCTGCGGGA
CACCCTGCGGGGCTTCCGCGAAGGGGTTGAAACCGGGGAGCGGACACGGGAGTTTGCCGAGGCCCTGGTGCAAGGTGTGA
TGGAGCATCGCGAGGCGATTGATCAGGCCATTGTGGCCCGTTCAAAAAACTGGGCCTTGTCCCGCATGCCGCGGGTTGAC
CTGAACATCATGCGGATGGCAGCCTATGAACTGATGTTCAAGCGGGACATCCCCAAGAAGGTCAGCATTAACGAGGCGAT
CGAGATCGCCAAGAAATATGGAGACAAGGAGTCTCCCGCCTTTGTGAACGGCATCCTGGATGAGCTGGAGGCCTGCCCCA
AGGATGAGGAGCGGAGTGATACGGAATGA

Upstream 100 bases:

>100_bases
CAGGCCGTGGAGCGGGCCGGCACCAAGGCGGGCAACAAGGGTTTTGAGGCCGCGGTTACCGCCATTGAGACCGTCAACGT
GATTAAGGCGATGAAATAAG

Downstream 100 bases:

>100_bases
ATGAGATCAAGGTTGGCCTGATCGGCTTTGGCAATATCGGTGCAGGCGTGGTCCGGCTGCTGCAGGAGAATGCGCAAACG
GTACAACAGAAGGTGGGTAG

Product: NusB antitermination factor

Products: NA

Alternate protein names: Protein nusB

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MGLRREARELALQMLYAQDTLQGSLRDTLRGFREGVETGERTREFAEALVQGVMEHREAIDQAIVARSKNWALSRMPRVD
LNIMRMAAYELMFKRDIPKKVSINEAIEIAKKYGDKESPAFVNGILDELEACPKDEERSDTE

Sequences:

>Translated_142_residues
MGLRREARELALQMLYAQDTLQGSLRDTLRGFREGVETGERTREFAEALVQGVMEHREAIDQAIVARSKNWALSRMPRVD
LNIMRMAAYELMFKRDIPKKVSINEAIEIAKKYGDKESPAFVNGILDELEACPKDEERSDTE
>Mature_141_residues
GLRREARELALQMLYAQDTLQGSLRDTLRGFREGVETGERTREFAEALVQGVMEHREAIDQAIVARSKNWALSRMPRVDL
NIMRMAAYELMFKRDIPKKVSINEAIEIAKKYGDKESPAFVNGILDELEACPKDEERSDTE

Specific function: Involved in the transcription termination process

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family

Homologues:

Organism=Escherichia coli, GI1786618, Length=120, Percent_Identity=32.5, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NUSB_GEOLS (B3E757)

Other databases:

- EMBL:   CP001089
- RefSeq:   YP_001951457.1
- ProteinModelPortal:   B3E757
- SMR:   B3E757
- GeneID:   6368111
- GenomeReviews:   CP001089_GR
- KEGG:   glo:Glov_1215
- HOGENOM:   HBG734409
- OMA:   SDNSSRF
- ProtClustDB:   CLSK828489
- HAMAP:   MF_00073
- InterPro:   IPR011605
- InterPro:   IPR006027
- Gene3D:   G3DSA:1.10.940.10
- TIGRFAMs:   TIGR01951

Pfam domain/function: PF01029 NusB; SSF48013 NusB_RsmB_TIM44

EC number: NA

Molecular weight: Translated: 16276; Mature: 16145

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLRREARELALQMLYAQDTLQGSLRDTLRGFREGVETGERTREFAEALVQGVMEHREAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQAIVARSKNWALSRMPRVDLNIMRMAAYELMFKRDIPKKVSINEAIEIAKKYGDKESPA
HHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHH
FVNGILDELEACPKDEERSDTE
HHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
GLRREARELALQMLYAQDTLQGSLRDTLRGFREGVETGERTREFAEALVQGVMEHREAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQAIVARSKNWALSRMPRVDLNIMRMAAYELMFKRDIPKKVSINEAIEIAKKYGDKESPA
HHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHH
FVNGILDELEACPKDEERSDTE
HHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA