| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is ptxB [H]
Identifier: 189424218
GI number: 189424218
Start: 1206312
End: 1207223
Strand: Reverse
Name: ptxB [H]
Synonym: Glov_1153
Alternate gene names: 189424218
Gene position: 1207223-1206312 (Counterclockwise)
Preceding gene: 189424226
Following gene: 189424217
Centisome position: 30.81
GC content: 57.02
Gene sequence:
>912_bases ATGACTGTACTCCCCCTACAACGGTTCGGCCTTTCAGGCAGCTTGTTTGCAGCAGCAGTGGCGCTCTGCACCTTTCTGCT GTGTGTACCGCCGGCGGCCGAAGCTGCCGGAAAGCCGTTGATCCGCTTTGGTGTGATTCCCCGCTATAACCCGCTGGTCA TGTACAAGCGTTACCAGCCGATCATGGATTATCTGACCGCCGAAACCCCCTACCGTTTTGAACTGAAGATCAGCAAAGAC TACCCTGAGGCGGTCCGTTTTCTGCAACAGGGGGTAACCCAGATCAGCTCACTGGGGGATGTGACCTTTGCCGAAGCCAA TCTGCGCTACCAGGCCATGCCGATCCTGAAACCGCTCAACAAAGAGGGTGTTCCCTTTTACCGCAGCGCCATCATTGTCC GCAACGACTCTGCATTGAGGAGCATTACAGAATTAAAGGGCAAGACCATGGCCTTCGGCTCACCGCATTCCACCTCAGGC AACCTGATCCCGCGCTATCTGCTCTGGGACAACAAGGTACGCATGCAGGATCTGAAATCCTTCACCAACCTGCAGCACCA CGATGCCGTGGCCAAGGCGATCCTGAAAGGTCAGTTTGATGCCGGCGCCGTCAAGGATGTGGTGGCCGAAAAATACAAAC CGCACGGCCTGCGAATCCTGGCTTGGTCCAAACCGATCCCGGCCGTGCCGCTGGTGGTCAGGCGGGACACGCCGCCAGAG GTGGTGGAGGCAATTACCCGGGCACTCCTCAAGCTGGATCGCACCACCCCCCGGCACAAGGCGATTATGAAAAACTGGGA TGATGAGTTCAACAACGGTTTTGCCACAGCCCGTCAGCAGGATTATGCCGACATCTTCCGTATGATCCGTGCCATACCAA CCGGCTGCGGCATCGGATGCCACCACAAATGA
Upstream 100 bases:
>100_bases GCGGAGCCTGGTTTCTTCCGACAGGGATTTGAAGAGATAGGCAACCTGTTTCATATCAAAACAAATATCCGCATAAGCGG ATGAGGTCAAGCAGAAAATC
Downstream 100 bases:
>100_bases CCCGCCGCTTTATCAGCATCAAGACGCAGTTTGTGCTGATTGCCATGCTGATGGTGGCACTGTCGTCAACACTGTGGGGC GTTTTTGCCTGGAAGACCGA
Product: phosphonate ABC transporter periplasmic phosphonate-binding protein
Products: 3-phospho-serine [Cytoplasm]; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MTVLPLQRFGLSGSLFAAAVALCTFLLCVPPAAEAAGKPLIRFGVIPRYNPLVMYKRYQPIMDYLTAETPYRFELKISKD YPEAVRFLQQGVTQISSLGDVTFAEANLRYQAMPILKPLNKEGVPFYRSAIIVRNDSALRSITELKGKTMAFGSPHSTSG NLIPRYLLWDNKVRMQDLKSFTNLQHHDAVAKAILKGQFDAGAVKDVVAEKYKPHGLRILAWSKPIPAVPLVVRRDTPPE VVEAITRALLKLDRTTPRHKAIMKNWDDEFNNGFATARQQDYADIFRMIRAIPTGCGIGCHHK
Sequences:
>Translated_303_residues MTVLPLQRFGLSGSLFAAAVALCTFLLCVPPAAEAAGKPLIRFGVIPRYNPLVMYKRYQPIMDYLTAETPYRFELKISKD YPEAVRFLQQGVTQISSLGDVTFAEANLRYQAMPILKPLNKEGVPFYRSAIIVRNDSALRSITELKGKTMAFGSPHSTSG NLIPRYLLWDNKVRMQDLKSFTNLQHHDAVAKAILKGQFDAGAVKDVVAEKYKPHGLRILAWSKPIPAVPLVVRRDTPPE VVEAITRALLKLDRTTPRHKAIMKNWDDEFNNGFATARQQDYADIFRMIRAIPTGCGIGCHHK >Mature_302_residues TVLPLQRFGLSGSLFAAAVALCTFLLCVPPAAEAAGKPLIRFGVIPRYNPLVMYKRYQPIMDYLTAETPYRFELKISKDY PEAVRFLQQGVTQISSLGDVTFAEANLRYQAMPILKPLNKEGVPFYRSAIIVRNDSALRSITELKGKTMAFGSPHSTSGN LIPRYLLWDNKVRMQDLKSFTNLQHHDAVAKAILKGQFDAGAVKDVVAEKYKPHGLRILAWSKPIPAVPLVVRRDTPPEV VEAITRALLKLDRTTPRHKAIMKNWDDEFNNGFATARQQDYADIFRMIRAIPTGCGIGCHHK
Specific function: Probably forms part of a binding-protein-dependent phosphite transporter. Required for oxidation of phosphite to phosphate [H]
COG id: COG3221
COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790543, Length=260, Percent_Identity=25.3846153846154, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR005770 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 33982; Mature: 33851
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLPLQRFGLSGSLFAAAVALCTFLLCVPPAAEAAGKPLIRFGVIPRYNPLVMYKRYQP CCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCEEEECCCCCCCCEEEEHHHHH IMDYLTAETPYRFELKISKDYPEAVRFLQQGVTQISSLGDVTFAEANLRYQAMPILKPLN HHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEHHHCCCC KEGVPFYRSAIIVRNDSALRSITELKGKTMAFGSPHSTSGNLIPRYLLWDNKVRMQDLKS CCCCCHHHEEEEEECCHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEECCCHHHHHHHH FTNLQHHDAVAKAILKGQFDAGAVKDVVAEKYKPHGLRILAWSKPIPAVPLVVRRDTPPE HHCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEECCCCHH VVEAITRALLKLDRTTPRHKAIMKNWDDEFNNGFATARQQDYADIFRMIRAIPTGCGIGC HHHHHHHHHHHHHCCCHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC HHK CCC >Mature Secondary Structure TVLPLQRFGLSGSLFAAAVALCTFLLCVPPAAEAAGKPLIRFGVIPRYNPLVMYKRYQP CCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCEEEECCCCCCCCEEEEHHHHH IMDYLTAETPYRFELKISKDYPEAVRFLQQGVTQISSLGDVTFAEANLRYQAMPILKPLN HHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEHHHCCCC KEGVPFYRSAIIVRNDSALRSITELKGKTMAFGSPHSTSGNLIPRYLLWDNKVRMQDLKS CCCCCHHHEEEEEECCHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEECCCHHHHHHHH FTNLQHHDAVAKAILKGQFDAGAVKDVVAEKYKPHGLRILAWSKPIPAVPLVVRRDTPPE HHCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEECCCCHH VVEAITRALLKLDRTTPRHKAIMKNWDDEFNNGFATARQQDYADIFRMIRAIPTGCGIGC HHHHHHHHHHHHHCCCHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC HHK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]
Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9791102 [H]