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The map label for this gene is 189424146

Identifier: 189424146

GI number: 189424146

Start: 1127407

End: 1128915

Strand: Reverse

Name: 189424146

Synonym: Glov_1080

Alternate gene names: NA

Gene position: 1128915-1127407 (Counterclockwise)

Preceding gene: 189424147

Following gene: 189424145

Centisome position: 28.82

GC content: 54.87

Gene sequence:

>1509_bases
ATGCTCCGCCGATTACTTACTGTCATTGCCGTCAGCCTGATTCCTGTTCTTGTCCAGGCATCAGAACTCGCCGGTTCCTC
TAAAAAATCAATCGAACCAGCTGATCGTGGACTTTCACGAATCGAAACCCCACGTGACAGTCGCAAACGCATCGCCCTGG
TGGTCGGCAACAGCCAGTATGCCTCAAGCCCCCTTAAAAACCCGGTTAATGACGCACGCGCCATGGCTGCAACGCTGCGC
AGGCTCGGATTCGAGGTGGATGAACAGATCAATCTCGGCTACATGCCCTTCAATGAAGCGATCGAGGCCTTCGGCAACAA
ACTGAAACCCGGCGGTATCGGGCTCTTCTACTATGCGGGACACGGCATGCAGGTACAGGGCGCCAACTATCTCATTCCTG
TCGATGCAACGATTCGTACCGAAAACGAGGTGCGCTACAAGGCCATAGATGCCGGATTGATCCTGGCCAAGATGGAAAGC
GCCAAGAGCGACGTCAATATCGTGGTTCTCGATGCATGTCGTGACAACCCTTTTGCCCGAAGTTTCCGCTCTGCCAGCAA
GGGTCTGGCCCAGATTGACGCACCAACCGGCACGATCATCGCCTATGCAACCTCACCAGGCAAAACGGCCAGCGACGGCA
AAGGAAAGAACGGAGCCTATACCGAGGCGCTCATCCAGGCAATGGAAAGCCCAGACCTGAAGGTTGAGGAGGTCTTTAAA
CGGGTTCGCAAGCTGGTTTTGGACAAGACCAACAGCATTCAGGTCCCTTGGGAGTCGTCATCACTGGTGGGTGACTTCCG
CTTCATCCGTACGGCCTCTTCGGCCAGCAGCAGCCAGCAGTCGGCACAGGCTATCAACCAGCCCTCCCCCCCTTCCAAAG
AGGCAGAGGACCTGGATGAGCTCATCGCCCGCGCCAAGGCTGAAGAACGAGCAAAACGCGAGGACCTGGAGCGGATTACT
GCCGATCTCGCTAAATATGAAAAAATAGTCACGTCGTCCAAAGGCAGTGAGCTGAGACAGGTTGCCTGGAAGGCCCTATC
CCAAAAATATCCCGAGGCAAACAGGGTGCCGCAGTATGACATCACAGCCTTTCTGGCACAGAAGGGTCTGTATCTCGAAG
TTGGCCGTGTGGTAACGGCCGAACAGAAAAAAAGAATCGAAGCGGAACGGACGGCAAAGATTGCCCAGGAGCAGGAAGAG
GCCCGCAAGAAAGAGCTGTTAGCCAATCAAACGATGGTGCGTACCGGCAATTACCATGTCCAGGGCAAAAACCCGAACGG
CTCCAGTTACAGTGGTAGCGTTGTCATTTCAAAAAACGGTGACACCTACTTCCTGGTCTGGAAGATCAGCAGTTCAACCT
ACTCAGGGAGCGGCACGTTGGCAGACAAGACCCTCACCGTTGAATGGGGTGACTCATCACCGGTTATTTACCACCTTGAA
AACGACGGTCGCCTTGTCGGCACCTGGGCTAAGGGCACCGCACTGGAAACCCTAACCCCGCTACAGTAA

Upstream 100 bases:

>100_bases
CCAAAACTGCCTTTTTCTCATACGGAAAAAGGCAGTTTTGCTTTTTGTGCAGTACAGGGGTATAAAAAACACTAGTGACC
ATCCATAAAAGGGGGAGGCC

Downstream 100 bases:

>100_bases
CACGCAGCCAAAACAGTCATATCTTCTACAAACTCGTTTATTTCTTCCAGCGACAAAGCTTGAAGAGCGCCCGCCAGTGG
GCGCCAAACTTCACGGGGCC

Product: peptidase C14 caspase catalytic subunit p20

Products: NA

Alternate protein names: Caspase Domain Protein; Caspase-Like Domain- And TPR Repeat-Containing Peptidase; Peptidase C; Caspase-Like Domain-Containing Protein; Peptidase Protein; Caspase Domain-Containing Protein; TPR Repeat-Containing Caspace; GUN4-Like Family; Caspase; TPR Repeat-Containing Serine/Threonin Protein Kinase; Peptidylprolyl Isomerase; Caspase-1 P; ICE-Like Protease; Paracaspase

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MLRRLLTVIAVSLIPVLVQASELAGSSKKSIEPADRGLSRIETPRDSRKRIALVVGNSQYASSPLKNPVNDARAMAATLR
RLGFEVDEQINLGYMPFNEAIEAFGNKLKPGGIGLFYYAGHGMQVQGANYLIPVDATIRTENEVRYKAIDAGLILAKMES
AKSDVNIVVLDACRDNPFARSFRSASKGLAQIDAPTGTIIAYATSPGKTASDGKGKNGAYTEALIQAMESPDLKVEEVFK
RVRKLVLDKTNSIQVPWESSSLVGDFRFIRTASSASSSQQSAQAINQPSPPSKEAEDLDELIARAKAEERAKREDLERIT
ADLAKYEKIVTSSKGSELRQVAWKALSQKYPEANRVPQYDITAFLAQKGLYLEVGRVVTAEQKKRIEAERTAKIAQEQEE
ARKKELLANQTMVRTGNYHVQGKNPNGSSYSGSVVISKNGDTYFLVWKISSSTYSGSGTLADKTLTVEWGDSSPVIYHLE
NDGRLVGTWAKGTALETLTPLQ

Sequences:

>Translated_502_residues
MLRRLLTVIAVSLIPVLVQASELAGSSKKSIEPADRGLSRIETPRDSRKRIALVVGNSQYASSPLKNPVNDARAMAATLR
RLGFEVDEQINLGYMPFNEAIEAFGNKLKPGGIGLFYYAGHGMQVQGANYLIPVDATIRTENEVRYKAIDAGLILAKMES
AKSDVNIVVLDACRDNPFARSFRSASKGLAQIDAPTGTIIAYATSPGKTASDGKGKNGAYTEALIQAMESPDLKVEEVFK
RVRKLVLDKTNSIQVPWESSSLVGDFRFIRTASSASSSQQSAQAINQPSPPSKEAEDLDELIARAKAEERAKREDLERIT
ADLAKYEKIVTSSKGSELRQVAWKALSQKYPEANRVPQYDITAFLAQKGLYLEVGRVVTAEQKKRIEAERTAKIAQEQEE
ARKKELLANQTMVRTGNYHVQGKNPNGSSYSGSVVISKNGDTYFLVWKISSSTYSGSGTLADKTLTVEWGDSSPVIYHLE
NDGRLVGTWAKGTALETLTPLQ
>Mature_502_residues
MLRRLLTVIAVSLIPVLVQASELAGSSKKSIEPADRGLSRIETPRDSRKRIALVVGNSQYASSPLKNPVNDARAMAATLR
RLGFEVDEQINLGYMPFNEAIEAFGNKLKPGGIGLFYYAGHGMQVQGANYLIPVDATIRTENEVRYKAIDAGLILAKMES
AKSDVNIVVLDACRDNPFARSFRSASKGLAQIDAPTGTIIAYATSPGKTASDGKGKNGAYTEALIQAMESPDLKVEEVFK
RVRKLVLDKTNSIQVPWESSSLVGDFRFIRTASSASSSQQSAQAINQPSPPSKEAEDLDELIARAKAEERAKREDLERIT
ADLAKYEKIVTSSKGSELRQVAWKALSQKYPEANRVPQYDITAFLAQKGLYLEVGRVVTAEQKKRIEAERTAKIAQEQEE
ARKKELLANQTMVRTGNYHVQGKNPNGSSYSGSVVISKNGDTYFLVWKISSSTYSGSGTLADKTLTVEWGDSSPVIYHLE
NDGRLVGTWAKGTALETLTPLQ

Specific function: Unknown

COG id: COG4249

COG function: function code R; Uncharacterized protein containing caspase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI5803078, Length=200, Percent_Identity=27, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI27886566, Length=167, Percent_Identity=29.940119760479, Blast_Score=79, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54871; Mature: 54871

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS50208 CASPASE_P20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRRLLTVIAVSLIPVLVQASELAGSSKKSIEPADRGLSRIETPRDSRKRIALVVGNSQY
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCHH
ASSPLKNPVNDARAMAATLRRLGFEVDEQINLGYMPFNEAIEAFGNKLKPGGIGLFYYAG
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEC
HGMQVQGANYLIPVDATIRTENEVRYKAIDAGLILAKMESAKSDVNIVVLDACRDNPFAR
CCEEECCCCEEEECCCEEECCCCEEEEEECCCEEEEEHHCCCCCCCEEEEECCCCCHHHH
SFRSASKGLAQIDAPTGTIIAYATSPGKTASDGKGKNGAYTEALIQAMESPDLKVEEVFK
HHHHHHCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHH
RVRKLVLDKTNSIQVPWESSSLVGDFRFIRTASSASSSQQSAQAINQPSPPSKEAEDLDE
HHHHHHHCCCCCEEECCCCCCHHHHHHHEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHH
LIARAKAEERAKREDLERITADLAKYEKIVTSSKGSELRQVAWKALSQKYPEANRVPQYD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHH
ITAFLAQKGLYLEVGRVVTAEQKKRIEAERTAKIAQEQEEARKKELLANQTMVRTGNYHV
HHHHHHCCCCEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEE
QGKNPNGSSYSGSVVISKNGDTYFLVWKISSSTYSGSGTLADKTLTVEWGDSSPVIYHLE
EECCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCEECEEEEEEECCCCCEEEEEC
NDGRLVGTWAKGTALETLTPLQ
CCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MLRRLLTVIAVSLIPVLVQASELAGSSKKSIEPADRGLSRIETPRDSRKRIALVVGNSQY
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCHH
ASSPLKNPVNDARAMAATLRRLGFEVDEQINLGYMPFNEAIEAFGNKLKPGGIGLFYYAG
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEC
HGMQVQGANYLIPVDATIRTENEVRYKAIDAGLILAKMESAKSDVNIVVLDACRDNPFAR
CCEEECCCCEEEECCCEEECCCCEEEEEECCCEEEEEHHCCCCCCCEEEEECCCCCHHHH
SFRSASKGLAQIDAPTGTIIAYATSPGKTASDGKGKNGAYTEALIQAMESPDLKVEEVFK
HHHHHHCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHH
RVRKLVLDKTNSIQVPWESSSLVGDFRFIRTASSASSSQQSAQAINQPSPPSKEAEDLDE
HHHHHHHCCCCCEEECCCCCCHHHHHHHEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHH
LIARAKAEERAKREDLERITADLAKYEKIVTSSKGSELRQVAWKALSQKYPEANRVPQYD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHH
ITAFLAQKGLYLEVGRVVTAEQKKRIEAERTAKIAQEQEEARKKELLANQTMVRTGNYHV
HHHHHHCCCCEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEE
QGKNPNGSSYSGSVVISKNGDTYFLVWKISSSTYSGSGTLADKTLTVEWGDSSPVIYHLE
EECCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCEECEEEEEEECCCCCEEEEEC
NDGRLVGTWAKGTALETLTPLQ
CCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA