Click here to switch to the map view.

The map label for this gene is nrfH [H]

Identifier: 189424109

GI number: 189424109

Start: 1084322

End: 1084807

Strand: Reverse

Name: nrfH [H]

Synonym: Glov_1043

Alternate gene names: 189424109

Gene position: 1084807-1084322 (Counterclockwise)

Preceding gene: 189424110

Following gene: 189424108

Centisome position: 27.69

GC content: 55.35

Gene sequence:

>486_bases
ATGCTGAAGAATCTGAGCTACACACAGAAACAGGCGCTGCTGATTGCAGTAGTCTGTTGTGCGCTGTTGGGGCTGTATCT
GACACTGGGGCCGCCGCATCTGCTGGCCAAGTCTGAATCACCGGATTTCTGTGCGAGCTGCCATGTCATGGAAGCACAGC
ACACCGCCTTCATGCATGCCGGTGCCCATCGCCGCTTCAAATGTGTCGACTGCCATCTGCCCAACGACAACCTGGCCAGC
CACTACATCTGGAAATCCATAGACGGTATGAAGGACGTATTGTTCTTCTACTCCGGCAAGGTCCCGGAGAAGATCACGCT
GTCTGAACATGGTGCCAAGGTGGTCAAGGCCAACTGCATCAGATGCCACGAAACGCTGGTATCGCAGATGGATACGTCAC
GCAACTGCTGGAGCTGCCACCGCCGGGTAACCCATACCGGTACCGGTGCACTGCAAACCAACCCGTTACTACAAACAAAC
CCCTGA

Upstream 100 bases:

>100_bases
GCCGGCAAGAAGTAGCAGGTGATACCAGCGCCGCCGGTGGTCCAGCAGACTGCCGGCGGCGTTTTTGTACCTGATTCCAC
GACAGAAGGGGGGTGAAGGG

Downstream 100 bases:

>100_bases
GGAGGAATCACCTATGAGAAGCAAACTGTTGGTACCACTTGTGGCAGCCGCCCTGTGCGGGGCCGCAATCACCGCCTGTG
CCCCGCCCAAGGCCGAGCAG

Product: cytochrome C nitrate reductase, small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MLKNLSYTQKQALLIAVVCCALLGLYLTLGPPHLLAKSESPDFCASCHVMEAQHTAFMHAGAHRRFKCVDCHLPNDNLAS
HYIWKSIDGMKDVLFFYSGKVPEKITLSEHGAKVVKANCIRCHETLVSQMDTSRNCWSCHRRVTHTGTGALQTNPLLQTN
P

Sequences:

>Translated_161_residues
MLKNLSYTQKQALLIAVVCCALLGLYLTLGPPHLLAKSESPDFCASCHVMEAQHTAFMHAGAHRRFKCVDCHLPNDNLAS
HYIWKSIDGMKDVLFFYSGKVPEKITLSEHGAKVVKANCIRCHETLVSQMDTSRNCWSCHRRVTHTGTGALQTNPLLQTN
P
>Mature_161_residues
MLKNLSYTQKQALLIAVVCCALLGLYLTLGPPHLLAKSESPDFCASCHVMEAQHTAFMHAGAHRRFKCVDCHLPNDNLAS
HYIWKSIDGMKDVLFFYSGKVPEKITLSEHGAKVVKANCIRCHETLVSQMDTSRNCWSCHRRVTHTGTGALQTNPLLQTN
P

Specific function: Subunit of the nitrite reductase complex that mediates electron transfer from quinol to the catalytic subunit [H]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017571
- InterPro:   IPR011031
- InterPro:   IPR005126 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 17935; Mature: 17935

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
9.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNLSYTQKQALLIAVVCCALLGLYLTLGPPHLLAKSESPDFCASCHVMEAQHTAFMHA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCCHHHHHHHHHHHHHHHHHC
GAHRRFKCVDCHLPNDNLASHYIWKSIDGMKDVLFFYSGKVPEKITLSEHGAKVVKANCI
CCCCCEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHH
RCHETLVSQMDTSRNCWSCHRRVTHTGTGALQTNPLLQTNP
HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEECCCCCCCCC
>Mature Secondary Structure
MLKNLSYTQKQALLIAVVCCALLGLYLTLGPPHLLAKSESPDFCASCHVMEAQHTAFMHA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCCHHHHHHHHHHHHHHHHHC
GAHRRFKCVDCHLPNDNLASHYIWKSIDGMKDVLFFYSGKVPEKITLSEHGAKVVKANCI
CCCCCEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHH
RCHETLVSQMDTSRNCWSCHRRVTHTGTGALQTNPLLQTNP
HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10672190; 14500908 [H]