| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is hisH [H]
Identifier: 189424086
GI number: 189424086
Start: 1059367
End: 1059990
Strand: Reverse
Name: hisH [H]
Synonym: Glov_1020
Alternate gene names: 189424086
Gene position: 1059990-1059367 (Counterclockwise)
Preceding gene: 189424087
Following gene: 189424085
Centisome position: 27.06
GC content: 56.41
Gene sequence:
>624_bases ATGATCGCAATCATTGACTACGGCATGGGCAACCTGCGCTCGGTTCAAAAAGGCTTTGAGCGGATAGGTTTTGCGGCGGA AGTAACCGCTGATCCGGCACGCATCCTTGCAGCAGAAAAAATCGTACTGCCGGGGGTAGGCGCCTTCCGGGATTGTATCC ACAATCTGGAGCAGGGTAGGTTTGTTGAGCCGATCCTGCAGGTGATTGCCGAAGGGCGGCCTTTTCTGGGGATCTGCCTC GGGCTGCAGCTGCTTTTTAGCGAAAGCGAAGAGTTCGGCCTGCACAAGGGGCTGGGAGTCATCCCCGGACGGGTGGTCCG TTTCCCGGAGGGAATGAAGGAACAGGGGGAAAAGCTGCCGGTACCTCACATGGGCTGGAATCAGATCACCCTGAAGGCAG AGACACCGTTGTTTAACGGCATTAGCGACGGCAGTAACGTCTATTTCGTACACTCCTACTACGTCAGGCCCGATGACCCG TCTGTCGTAGCAGCCACCTGCAGCTACGGCCTGGAATTCTGCGCCGCCATCCGCAAGGACAATGTCATGGCCACCCAGTT TCACCCTGAAAAATCGCAGGGAATCGGCCTGCAGATGCTGAAAAACTTTGCCGAACTGCACTGA
Upstream 100 bases:
>100_bases TCTCGCAGGACGTGATCACCTTCCTGCAGAAGTGGCTGATCGACCACATCAAGGGGCAGGACAAGAAATACGGTCCACAC CTGACCAAGAATGGTATCAA
Downstream 100 bases:
>100_bases TCTACCAAGAACACGAAGTATCACTAAGAAAACTACAAAAAGCAGTCAACTTGATTTTAGCTTTACGCCTTACTTGGTGT ACCTTCGTGTCCTTCGTGGA
Product: imidazole glycerol phosphate synthase subunit HisH
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MIAIIDYGMGNLRSVQKGFERIGFAAEVTADPARILAAEKIVLPGVGAFRDCIHNLEQGRFVEPILQVIAEGRPFLGICL GLQLLFSESEEFGLHKGLGVIPGRVVRFPEGMKEQGEKLPVPHMGWNQITLKAETPLFNGISDGSNVYFVHSYYVRPDDP SVVAATCSYGLEFCAAIRKDNVMATQFHPEKSQGIGLQMLKNFAELH
Sequences:
>Translated_207_residues MIAIIDYGMGNLRSVQKGFERIGFAAEVTADPARILAAEKIVLPGVGAFRDCIHNLEQGRFVEPILQVIAEGRPFLGICL GLQLLFSESEEFGLHKGLGVIPGRVVRFPEGMKEQGEKLPVPHMGWNQITLKAETPLFNGISDGSNVYFVHSYYVRPDDP SVVAATCSYGLEFCAAIRKDNVMATQFHPEKSQGIGLQMLKNFAELH >Mature_207_residues MIAIIDYGMGNLRSVQKGFERIGFAAEVTADPARILAAEKIVLPGVGAFRDCIHNLEQGRFVEPILQVIAEGRPFLGICL GLQLLFSESEEFGLHKGLGVIPGRVVRFPEGMKEQGEKLPVPHMGWNQITLKAETPLFNGISDGSNVYFVHSYYVRPDDP SVVAATCSYGLEFCAAIRKDNVMATQFHPEKSQGIGLQMLKNFAELH
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=205, Percent_Identity=42.9268292682927, Blast_Score=148, Evalue=3e-37, Organism=Saccharomyces cerevisiae, GI6319725, Length=214, Percent_Identity=35.5140186915888, Blast_Score=123, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.-
Molecular weight: Translated: 22776; Mature: 22776
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAIIDYGMGNLRSVQKGFERIGFAAEVTADPARILAAEKIVLPGVGAFRDCIHNLEQGR CEEEEECCCCHHHHHHHHHHHHCCEEECCCCHHHHHHHHHEECCCCHHHHHHHHHHHCCC FVEPILQVIAEGRPFLGICLGLQLLFSESEEFGLHKGLGVIPGRVVRFPEGMKEQGEKLP HHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCEEECCCCHHHCCCCCC VPHMGWNQITLKAETPLFNGISDGSNVYFVHSYYVRPDDPSVVAATCSYGLEFCAAIRKD CCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHCC NVMATQFHPEKSQGIGLQMLKNFAELH CEEEEEECCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MIAIIDYGMGNLRSVQKGFERIGFAAEVTADPARILAAEKIVLPGVGAFRDCIHNLEQGR CEEEEECCCCHHHHHHHHHHHHCCEEECCCCHHHHHHHHHEECCCCHHHHHHHHHHHCCC FVEPILQVIAEGRPFLGICLGLQLLFSESEEFGLHKGLGVIPGRVVRFPEGMKEQGEKLP HHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCEEECCCCHHHCCCCCC VPHMGWNQITLKAETPLFNGISDGSNVYFVHSYYVRPDDPSVVAATCSYGLEFCAAIRKD CCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHCC NVMATQFHPEKSQGIGLQMLKNFAELH CEEEEEECCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA