| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is hisA
Identifier: 189424085
GI number: 189424085
Start: 1058514
End: 1059251
Strand: Reverse
Name: hisA
Synonym: Glov_1019
Alternate gene names: 189424085
Gene position: 1059251-1058514 (Counterclockwise)
Preceding gene: 189424086
Following gene: 189424084
Centisome position: 27.04
GC content: 59.21
Gene sequence:
>738_bases ATGATCGTCATACCTGCCATAGACCTGAAAGAAGGTAACTGCGTCCGCCTGGAACAAGGCGAGATGAACCGCGACACCGT ATTCTCCGACAATCCTGCCGAGCAGGCCCTGAAGTGGCAGGAGGCCGGCGCAGAACTGCTGCACCTGGTGGATCTGGACG GTGCCTTTGCCGGCATCCCCAAAAACAAGGCTGCCATTGAGGCAATTATCAAGGCGATCACCATTCCTGCCCAACTGGGT GGCGGCATCCGTGATATCGCCACCATTGAGGCCTACCTGTCACTGGGGCTTTCCCGGGTGATCATCGGCACCGCTGCCCA GCGCAACCCGGAACTGGTGATCGAGGCCTGCCAGAAGTTTCCCGGCCGGATTGTAGTCGGCATTGATGCCAAGAACGGCA TGGTGGCGGTGCAGGGCTGGGCTGAACTGACTGACATCAGCGCGGTTGATCTGGCAAAGAAGTTTGAAGATTGTGGTGTT GCCGCCATCATCTACACCGACATCAGCCGGGACGGCATGATGGGTGGCCCCAACCTTGAGGCGACCAGGGCGCTGGCAGA GGCGATCTCAATCCCGGTGATCGCTTCCGGCGGTGTCTCTTCACTGAAGGATATCGAAAACCTGATGGCCATTGAAGCCA GCGGTGTAACCGGCGCCATTACCGGCAAGGCGATCTACACCGGCGCCATCAACCTGCGTGAGGCGATTGACCTGACCAAG CGGGGCTGCCAATGCTGA
Upstream 100 bases:
>100_bases AAGTATCACTAAGAAAACTACAAAAAGCAGTCAACTTGATTTTAGCTTTACGCCTTACTTGGTGTACCTTCGTGTCCTTC GTGGATAAAAGGAACTGATA
Downstream 100 bases:
>100_bases CCCGCCGTATCATTCCCTGTCTGGATGTGACCGGCGGCCGGGTGGTCAAGGGGGTCCAGTTTCTTGAGCTGCGTGATGCC GGTGATCCGGTGGAAATCGC
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MIVIPAIDLKEGNCVRLEQGEMNRDTVFSDNPAEQALKWQEAGAELLHLVDLDGAFAGIPKNKAAIEAIIKAITIPAQLG GGIRDIATIEAYLSLGLSRVIIGTAAQRNPELVIEACQKFPGRIVVGIDAKNGMVAVQGWAELTDISAVDLAKKFEDCGV AAIIYTDISRDGMMGGPNLEATRALAEAISIPVIASGGVSSLKDIENLMAIEASGVTGAITGKAIYTGAINLREAIDLTK RGCQC
Sequences:
>Translated_245_residues MIVIPAIDLKEGNCVRLEQGEMNRDTVFSDNPAEQALKWQEAGAELLHLVDLDGAFAGIPKNKAAIEAIIKAITIPAQLG GGIRDIATIEAYLSLGLSRVIIGTAAQRNPELVIEACQKFPGRIVVGIDAKNGMVAVQGWAELTDISAVDLAKKFEDCGV AAIIYTDISRDGMMGGPNLEATRALAEAISIPVIASGGVSSLKDIENLMAIEASGVTGAITGKAIYTGAINLREAIDLTK RGCQC >Mature_245_residues MIVIPAIDLKEGNCVRLEQGEMNRDTVFSDNPAEQALKWQEAGAELLHLVDLDGAFAGIPKNKAAIEAIIKAITIPAQLG GGIRDIATIEAYLSLGLSRVIIGTAAQRNPELVIEACQKFPGRIVVGIDAKNGMVAVQGWAELTDISAVDLAKKFEDCGV AAIIYTDISRDGMMGGPNLEATRALAEAISIPVIASGGVSSLKDIENLMAIEASGVTGAITGKAIYTGAINLREAIDLTK RGCQC
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=242, Percent_Identity=31.8181818181818, Blast_Score=134, Evalue=4e-33, Organism=Escherichia coli, GI1788336, Length=243, Percent_Identity=25.5144032921811, Blast_Score=80, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_GEOLS (B3E618)
Other databases:
- EMBL: CP001089 - RefSeq: YP_001951262.1 - ProteinModelPortal: B3E618 - SMR: B3E618 - GeneID: 6369122 - GenomeReviews: CP001089_GR - KEGG: glo:Glov_1019 - HOGENOM: HBG541613 - OMA: SIIYTDI - ProtClustDB: PRK00748 - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00007
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 25686; Mature: 25686
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: ACT_SITE 8-8 ACT_SITE 129-129
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVIPAIDLKEGNCVRLEQGEMNRDTVFSDNPAEQALKWQEAGAELLHLVDLDGAFAGIP CEEECEEECCCCCEEEEECCCCCCCCEECCCCHHHHHHHHHCCHHEEEEEECCCCCCCCC KNKAAIEAIIKAITIPAQLGGGIRDIATIEAYLSLGLSRVIIGTAAQRNPELVIEACQKF CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHEEECCCCCCHHHHHHHHHCC PGRIVVGIDAKNGMVAVQGWAELTDISAVDLAKKFEDCGVAAIIYTDISRDGMMGGPNLE CCEEEEEEECCCCEEEEECCHHHHCCHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCHH ATRALAEAISIPVIASGGVSSLKDIENLMAIEASGVTGAITGKAIYTGAINLREAIDLTK HHHHHHHHHCCCEEECCCHHHHHHHHHHHEEECCCCEEEEECCEEEECCCHHHHHHHHHH RGCQC CCCCC >Mature Secondary Structure MIVIPAIDLKEGNCVRLEQGEMNRDTVFSDNPAEQALKWQEAGAELLHLVDLDGAFAGIP CEEECEEECCCCCEEEEECCCCCCCCEECCCCHHHHHHHHHCCHHEEEEEECCCCCCCCC KNKAAIEAIIKAITIPAQLGGGIRDIATIEAYLSLGLSRVIIGTAAQRNPELVIEACQKF CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHEEECCCCCCHHHHHHHHHCC PGRIVVGIDAKNGMVAVQGWAELTDISAVDLAKKFEDCGVAAIIYTDISRDGMMGGPNLE CCEEEEEEECCCCEEEEECCHHHHCCHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCHH ATRALAEAISIPVIASGGVSSLKDIENLMAIEASGVTGAITGKAIYTGAINLREAIDLTK HHHHHHHHHCCCEEECCCHHHHHHHHHHHEEECCCCEEEEECCEEEECCCHHHHHHHHHH RGCQC CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA