Definition Geobacter lovleyi SZ chromosome, complete genome.
Accession NC_010814
Length 3,917,761

Click here to switch to the map view.

The map label for this gene is 189424056

Identifier: 189424056

GI number: 189424056

Start: 1028559

End: 1029893

Strand: Reverse

Name: 189424056

Synonym: Glov_0990

Alternate gene names: NA

Gene position: 1029893-1028559 (Counterclockwise)

Preceding gene: 189424057

Following gene: 189424055

Centisome position: 26.29

GC content: 60.67

Gene sequence:

>1335_bases
ATGCAGGGATTACTGATAGAGACAGTTGAACCCGGCTCTCCGGCCGACCGGGCCGGGCTGCTGCCCGGTCAACGGCTTTT
GGAGATTGACGGCACCCGGCTGCGGGATCTGATCGACTACAGCTGGCTGGCCAGCGATGACCCGGCTGAGCTGACCATTG
CAACAGAAGACGGCAGCAACCGGATCGTGTTGCTTGAACCCGACCCGGGGGAGCCGCCCGGTCTGACCTTTGCCCCGCCG
GAACCGAAGCGCTGCGGCAACAACTGCATCTTCTGCTTTGTGCATCAACTCCCCAAAGGGTTGCGGCGTCCCCTGTATGT
CAAGGATGAAGACTACCGGCTCTCGTTCCTGCAGGGCACCTACGTCACCCTCAGCAATCTGAAGGCGACGGAGCTGCGCC
GGATCGTCACACAGCGTCTCTCCCCCCTTTACATCTCGGTCCATGCCGTTGATCCGGCGGTGCGTGAACGGTTGCTGGGC
AGAAGCAACATTCCGCCAATCCTGGAGCAGCTGAAAGAGCTGGCCCGGGCCAGGATCGAAATGCATACCCAGGTGGTGCT
CTGCCCCGCTGTCAACGACGGACCCGTGCTGGAGCAGACCGTACAGGAGCTGGCCGCACTCTACCCGGCAGTCCGTTCTC
TGGCCGTAGTGCCGGTGGGGCTGACCGAACATCGTCAGCGTCTGCCCGAGCTGACTCCCGTTGACAGGAGCTATGCTGCA
GCGTTTCTGGACCACTGGCTGCCCCGCATGCGCCACCTCAACAGACAGCTTGGTGACGCCTTTCTGCAACTGGCGGACGA
GTTCTTTCTGAAGGCCAATTATCCTATACCTGCATTGAAGGAGTACGGCGACCTGCCCCAGTGGGAAAACGGGGTCGGCA
TGGTAGCCTGGTTTTTAAAGGATGCCTCAGCTGTGCTGAAGCGGGCAAGACCGTTACCGTCCATTCGCGCAACCGTTGTC
ACCGGCCAGTCTGCAGTCGGCTTTGTGGACCGTTTTCTGGCGGAGCTGAGTGATAAAACCGGCTGTCAGCTGACCAGTGC
AGCCATCCCCAACCAGCTGTTCGGCGCCAGCGTTACCGTGACCGGCCTGGTAAGCGGCAGAGATATCATTGCTGAGCTAA
GGGACAAACAACCGGGCCAGCTGCTGCTGATTCCGGAGGTGATGCTGAAGGAAGGGGAAGGCTGTTTCCTTGACAACCTG
ACCCCCCGTGATCTGATCCGGGAACTCGGCCTGGCGGTCATCGCCTTTGAACCGACTCCCTCCGGCCTCTACAAGGCGCT
TCGCGGGCTGACTCCCAAAAAACTGAAGGCAGTGCTACTGACCGCTGCCGACTAA

Upstream 100 bases:

>100_bases
TGACGGCACCTTCCGCCTGCACCATCACCCCTGACAGCCAGGGCGGACGGAACCTCACCGCCCTCCACTGCTTACCTTAC
AGTAGAAAAAACGGTTTACC

Downstream 100 bases:

>100_bases
CCCTCCGGTCCACCGGGCTACACCCGTCCGGGCAGGCTGTACAGGAAAGGTCCGTACGTATGAAGATGAAAAGCATCATC
GGCTGTCTATTGGGCCTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: FeS-Containing Oxidoreductase; FeS-Containing Cyanobacterial-Specific Oxidoreductase; PDZ Domain Protein; FeS-Containing Organism-Specific Oxidoreductase; FeS-Containing-Specific Oxidoreductase; Response Regulator Receiver Protein; PDZ Domain-Containing Protein

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MQGLLIETVEPGSPADRAGLLPGQRLLEIDGTRLRDLIDYSWLASDDPAELTIATEDGSNRIVLLEPDPGEPPGLTFAPP
EPKRCGNNCIFCFVHQLPKGLRRPLYVKDEDYRLSFLQGTYVTLSNLKATELRRIVTQRLSPLYISVHAVDPAVRERLLG
RSNIPPILEQLKELARARIEMHTQVVLCPAVNDGPVLEQTVQELAALYPAVRSLAVVPVGLTEHRQRLPELTPVDRSYAA
AFLDHWLPRMRHLNRQLGDAFLQLADEFFLKANYPIPALKEYGDLPQWENGVGMVAWFLKDASAVLKRARPLPSIRATVV
TGQSAVGFVDRFLAELSDKTGCQLTSAAIPNQLFGASVTVTGLVSGRDIIAELRDKQPGQLLLIPEVMLKEGEGCFLDNL
TPRDLIRELGLAVIAFEPTPSGLYKALRGLTPKKLKAVLLTAAD

Sequences:

>Translated_444_residues
MQGLLIETVEPGSPADRAGLLPGQRLLEIDGTRLRDLIDYSWLASDDPAELTIATEDGSNRIVLLEPDPGEPPGLTFAPP
EPKRCGNNCIFCFVHQLPKGLRRPLYVKDEDYRLSFLQGTYVTLSNLKATELRRIVTQRLSPLYISVHAVDPAVRERLLG
RSNIPPILEQLKELARARIEMHTQVVLCPAVNDGPVLEQTVQELAALYPAVRSLAVVPVGLTEHRQRLPELTPVDRSYAA
AFLDHWLPRMRHLNRQLGDAFLQLADEFFLKANYPIPALKEYGDLPQWENGVGMVAWFLKDASAVLKRARPLPSIRATVV
TGQSAVGFVDRFLAELSDKTGCQLTSAAIPNQLFGASVTVTGLVSGRDIIAELRDKQPGQLLLIPEVMLKEGEGCFLDNL
TPRDLIRELGLAVIAFEPTPSGLYKALRGLTPKKLKAVLLTAAD
>Mature_444_residues
MQGLLIETVEPGSPADRAGLLPGQRLLEIDGTRLRDLIDYSWLASDDPAELTIATEDGSNRIVLLEPDPGEPPGLTFAPP
EPKRCGNNCIFCFVHQLPKGLRRPLYVKDEDYRLSFLQGTYVTLSNLKATELRRIVTQRLSPLYISVHAVDPAVRERLLG
RSNIPPILEQLKELARARIEMHTQVVLCPAVNDGPVLEQTVQELAALYPAVRSLAVVPVGLTEHRQRLPELTPVDRSYAA
AFLDHWLPRMRHLNRQLGDAFLQLADEFFLKANYPIPALKEYGDLPQWENGVGMVAWFLKDASAVLKRARPLPSIRATVV
TGQSAVGFVDRFLAELSDKTGCQLTSAAIPNQLFGASVTVTGLVSGRDIIAELRDKQPGQLLLIPEVMLKEGEGCFLDNL
TPRDLIRELGLAVIAFEPTPSGLYKALRGLTPKKLKAVLLTAAD

Specific function: Unknown

COG id: COG1625

COG function: function code C; Fe-S oxidoreductase, related to NifB/MoaA family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48973; Mature: 48973

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGLLIETVEPGSPADRAGLLPGQRLLEIDGTRLRDLIDYSWLASDDPAELTIATEDGSN
CCCCEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCEEEEEEECCCC
RIVLLEPDPGEPPGLTFAPPEPKRCGNNCIFCFVHQLPKGLRRPLYVKDEDYRLSFLQGT
EEEEECCCCCCCCCCCCCCCCHHHCCCCEEEEEHHHHHHHHCCCEEECCCCCEEEEECCC
YVTLSNLKATELRRIVTQRLSPLYISVHAVDPAVRERLLGRSNIPPILEQLKELARARIE
EEEECCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
MHTQVVLCPAVNDGPVLEQTVQELAALYPAVRSLAVVPVGLTEHRQRLPELTPVDRSYAA
HCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHCCCCCCCCHHHHH
AFLDHWLPRMRHLNRQLGDAFLQLADEFFLKANYPIPALKEYGDLPQWENGVGMVAWFLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHCCCCCCCCCCHHHHHHHH
DASAVLKRARPLPSIRATVVTGQSAVGFVDRFLAELSDKTGCQLTSAAIPNQLFGASVTV
HHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEHHHCCHHHCCCCEEE
TGLVSGRDIIAELRDKQPGQLLLIPEVMLKEGEGCFLDNLTPRDLIRELGLAVIAFEPTP
EEEECCHHHHHHHHCCCCCCEEEECHHHHCCCCCCEECCCCHHHHHHHCCEEEEEECCCC
SGLYKALRGLTPKKLKAVLLTAAD
HHHHHHHHCCCHHHHHEEEEEECC
>Mature Secondary Structure
MQGLLIETVEPGSPADRAGLLPGQRLLEIDGTRLRDLIDYSWLASDDPAELTIATEDGSN
CCCCEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCEEEEEEECCCC
RIVLLEPDPGEPPGLTFAPPEPKRCGNNCIFCFVHQLPKGLRRPLYVKDEDYRLSFLQGT
EEEEECCCCCCCCCCCCCCCCHHHCCCCEEEEEHHHHHHHHCCCEEECCCCCEEEEECCC
YVTLSNLKATELRRIVTQRLSPLYISVHAVDPAVRERLLGRSNIPPILEQLKELARARIE
EEEECCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
MHTQVVLCPAVNDGPVLEQTVQELAALYPAVRSLAVVPVGLTEHRQRLPELTPVDRSYAA
HCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHCCCCCCCCHHHHH
AFLDHWLPRMRHLNRQLGDAFLQLADEFFLKANYPIPALKEYGDLPQWENGVGMVAWFLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHCCCCCCCCCCHHHHHHHH
DASAVLKRARPLPSIRATVVTGQSAVGFVDRFLAELSDKTGCQLTSAAIPNQLFGASVTV
HHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEHHHCCHHHCCCCEEE
TGLVSGRDIIAELRDKQPGQLLLIPEVMLKEGEGCFLDNLTPRDLIRELGLAVIAFEPTP
EEEECCHHHHHHHHCCCCCCEEEECHHHHCCCCCCEECCCCHHHHHHHCCEEEEEECCCC
SGLYKALRGLTPKKLKAVLLTAAD
HHHHHHHHCCCHHHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA