| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424056
Identifier: 189424056
GI number: 189424056
Start: 1028559
End: 1029893
Strand: Reverse
Name: 189424056
Synonym: Glov_0990
Alternate gene names: NA
Gene position: 1029893-1028559 (Counterclockwise)
Preceding gene: 189424057
Following gene: 189424055
Centisome position: 26.29
GC content: 60.67
Gene sequence:
>1335_bases ATGCAGGGATTACTGATAGAGACAGTTGAACCCGGCTCTCCGGCCGACCGGGCCGGGCTGCTGCCCGGTCAACGGCTTTT GGAGATTGACGGCACCCGGCTGCGGGATCTGATCGACTACAGCTGGCTGGCCAGCGATGACCCGGCTGAGCTGACCATTG CAACAGAAGACGGCAGCAACCGGATCGTGTTGCTTGAACCCGACCCGGGGGAGCCGCCCGGTCTGACCTTTGCCCCGCCG GAACCGAAGCGCTGCGGCAACAACTGCATCTTCTGCTTTGTGCATCAACTCCCCAAAGGGTTGCGGCGTCCCCTGTATGT CAAGGATGAAGACTACCGGCTCTCGTTCCTGCAGGGCACCTACGTCACCCTCAGCAATCTGAAGGCGACGGAGCTGCGCC GGATCGTCACACAGCGTCTCTCCCCCCTTTACATCTCGGTCCATGCCGTTGATCCGGCGGTGCGTGAACGGTTGCTGGGC AGAAGCAACATTCCGCCAATCCTGGAGCAGCTGAAAGAGCTGGCCCGGGCCAGGATCGAAATGCATACCCAGGTGGTGCT CTGCCCCGCTGTCAACGACGGACCCGTGCTGGAGCAGACCGTACAGGAGCTGGCCGCACTCTACCCGGCAGTCCGTTCTC TGGCCGTAGTGCCGGTGGGGCTGACCGAACATCGTCAGCGTCTGCCCGAGCTGACTCCCGTTGACAGGAGCTATGCTGCA GCGTTTCTGGACCACTGGCTGCCCCGCATGCGCCACCTCAACAGACAGCTTGGTGACGCCTTTCTGCAACTGGCGGACGA GTTCTTTCTGAAGGCCAATTATCCTATACCTGCATTGAAGGAGTACGGCGACCTGCCCCAGTGGGAAAACGGGGTCGGCA TGGTAGCCTGGTTTTTAAAGGATGCCTCAGCTGTGCTGAAGCGGGCAAGACCGTTACCGTCCATTCGCGCAACCGTTGTC ACCGGCCAGTCTGCAGTCGGCTTTGTGGACCGTTTTCTGGCGGAGCTGAGTGATAAAACCGGCTGTCAGCTGACCAGTGC AGCCATCCCCAACCAGCTGTTCGGCGCCAGCGTTACCGTGACCGGCCTGGTAAGCGGCAGAGATATCATTGCTGAGCTAA GGGACAAACAACCGGGCCAGCTGCTGCTGATTCCGGAGGTGATGCTGAAGGAAGGGGAAGGCTGTTTCCTTGACAACCTG ACCCCCCGTGATCTGATCCGGGAACTCGGCCTGGCGGTCATCGCCTTTGAACCGACTCCCTCCGGCCTCTACAAGGCGCT TCGCGGGCTGACTCCCAAAAAACTGAAGGCAGTGCTACTGACCGCTGCCGACTAA
Upstream 100 bases:
>100_bases TGACGGCACCTTCCGCCTGCACCATCACCCCTGACAGCCAGGGCGGACGGAACCTCACCGCCCTCCACTGCTTACCTTAC AGTAGAAAAAACGGTTTACC
Downstream 100 bases:
>100_bases CCCTCCGGTCCACCGGGCTACACCCGTCCGGGCAGGCTGTACAGGAAAGGTCCGTACGTATGAAGATGAAAAGCATCATC GGCTGTCTATTGGGCCTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: FeS-Containing Oxidoreductase; FeS-Containing Cyanobacterial-Specific Oxidoreductase; PDZ Domain Protein; FeS-Containing Organism-Specific Oxidoreductase; FeS-Containing-Specific Oxidoreductase; Response Regulator Receiver Protein; PDZ Domain-Containing Protein
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MQGLLIETVEPGSPADRAGLLPGQRLLEIDGTRLRDLIDYSWLASDDPAELTIATEDGSNRIVLLEPDPGEPPGLTFAPP EPKRCGNNCIFCFVHQLPKGLRRPLYVKDEDYRLSFLQGTYVTLSNLKATELRRIVTQRLSPLYISVHAVDPAVRERLLG RSNIPPILEQLKELARARIEMHTQVVLCPAVNDGPVLEQTVQELAALYPAVRSLAVVPVGLTEHRQRLPELTPVDRSYAA AFLDHWLPRMRHLNRQLGDAFLQLADEFFLKANYPIPALKEYGDLPQWENGVGMVAWFLKDASAVLKRARPLPSIRATVV TGQSAVGFVDRFLAELSDKTGCQLTSAAIPNQLFGASVTVTGLVSGRDIIAELRDKQPGQLLLIPEVMLKEGEGCFLDNL TPRDLIRELGLAVIAFEPTPSGLYKALRGLTPKKLKAVLLTAAD
Sequences:
>Translated_444_residues MQGLLIETVEPGSPADRAGLLPGQRLLEIDGTRLRDLIDYSWLASDDPAELTIATEDGSNRIVLLEPDPGEPPGLTFAPP EPKRCGNNCIFCFVHQLPKGLRRPLYVKDEDYRLSFLQGTYVTLSNLKATELRRIVTQRLSPLYISVHAVDPAVRERLLG RSNIPPILEQLKELARARIEMHTQVVLCPAVNDGPVLEQTVQELAALYPAVRSLAVVPVGLTEHRQRLPELTPVDRSYAA AFLDHWLPRMRHLNRQLGDAFLQLADEFFLKANYPIPALKEYGDLPQWENGVGMVAWFLKDASAVLKRARPLPSIRATVV TGQSAVGFVDRFLAELSDKTGCQLTSAAIPNQLFGASVTVTGLVSGRDIIAELRDKQPGQLLLIPEVMLKEGEGCFLDNL TPRDLIRELGLAVIAFEPTPSGLYKALRGLTPKKLKAVLLTAAD >Mature_444_residues MQGLLIETVEPGSPADRAGLLPGQRLLEIDGTRLRDLIDYSWLASDDPAELTIATEDGSNRIVLLEPDPGEPPGLTFAPP EPKRCGNNCIFCFVHQLPKGLRRPLYVKDEDYRLSFLQGTYVTLSNLKATELRRIVTQRLSPLYISVHAVDPAVRERLLG RSNIPPILEQLKELARARIEMHTQVVLCPAVNDGPVLEQTVQELAALYPAVRSLAVVPVGLTEHRQRLPELTPVDRSYAA AFLDHWLPRMRHLNRQLGDAFLQLADEFFLKANYPIPALKEYGDLPQWENGVGMVAWFLKDASAVLKRARPLPSIRATVV TGQSAVGFVDRFLAELSDKTGCQLTSAAIPNQLFGASVTVTGLVSGRDIIAELRDKQPGQLLLIPEVMLKEGEGCFLDNL TPRDLIRELGLAVIAFEPTPSGLYKALRGLTPKKLKAVLLTAAD
Specific function: Unknown
COG id: COG1625
COG function: function code C; Fe-S oxidoreductase, related to NifB/MoaA family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48973; Mature: 48973
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS50106 PDZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGLLIETVEPGSPADRAGLLPGQRLLEIDGTRLRDLIDYSWLASDDPAELTIATEDGSN CCCCEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCEEEEEEECCCC RIVLLEPDPGEPPGLTFAPPEPKRCGNNCIFCFVHQLPKGLRRPLYVKDEDYRLSFLQGT EEEEECCCCCCCCCCCCCCCCHHHCCCCEEEEEHHHHHHHHCCCEEECCCCCEEEEECCC YVTLSNLKATELRRIVTQRLSPLYISVHAVDPAVRERLLGRSNIPPILEQLKELARARIE EEEECCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH MHTQVVLCPAVNDGPVLEQTVQELAALYPAVRSLAVVPVGLTEHRQRLPELTPVDRSYAA HCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHCCCCCCCCHHHHH AFLDHWLPRMRHLNRQLGDAFLQLADEFFLKANYPIPALKEYGDLPQWENGVGMVAWFLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHCCCCCCCCCCHHHHHHHH DASAVLKRARPLPSIRATVVTGQSAVGFVDRFLAELSDKTGCQLTSAAIPNQLFGASVTV HHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEHHHCCHHHCCCCEEE TGLVSGRDIIAELRDKQPGQLLLIPEVMLKEGEGCFLDNLTPRDLIRELGLAVIAFEPTP EEEECCHHHHHHHHCCCCCCEEEECHHHHCCCCCCEECCCCHHHHHHHCCEEEEEECCCC SGLYKALRGLTPKKLKAVLLTAAD HHHHHHHHCCCHHHHHEEEEEECC >Mature Secondary Structure MQGLLIETVEPGSPADRAGLLPGQRLLEIDGTRLRDLIDYSWLASDDPAELTIATEDGSN CCCCEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCEEEEEEECCCC RIVLLEPDPGEPPGLTFAPPEPKRCGNNCIFCFVHQLPKGLRRPLYVKDEDYRLSFLQGT EEEEECCCCCCCCCCCCCCCCHHHCCCCEEEEEHHHHHHHHCCCEEECCCCCEEEEECCC YVTLSNLKATELRRIVTQRLSPLYISVHAVDPAVRERLLGRSNIPPILEQLKELARARIE EEEECCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH MHTQVVLCPAVNDGPVLEQTVQELAALYPAVRSLAVVPVGLTEHRQRLPELTPVDRSYAA HCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHCCCCCCCCHHHHH AFLDHWLPRMRHLNRQLGDAFLQLADEFFLKANYPIPALKEYGDLPQWENGVGMVAWFLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHCCCCCCCCCCHHHHHHHH DASAVLKRARPLPSIRATVVTGQSAVGFVDRFLAELSDKTGCQLTSAAIPNQLFGASVTV HHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEHHHCCHHHCCCCEEE TGLVSGRDIIAELRDKQPGQLLLIPEVMLKEGEGCFLDNLTPRDLIRELGLAVIAFEPTP EEEECCHHHHHHHHCCCCCCEEEECHHHHCCCCCCEECCCCHHHHHHHCCEEEEEECCCC SGLYKALRGLTPKKLKAVLLTAAD HHHHHHHHCCCHHHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA