| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424055
Identifier: 189424055
GI number: 189424055
Start: 1027477
End: 1028499
Strand: Reverse
Name: 189424055
Synonym: Glov_0989
Alternate gene names: NA
Gene position: 1028499-1027477 (Counterclockwise)
Preceding gene: 189424056
Following gene: 189424054
Centisome position: 26.25
GC content: 55.82
Gene sequence:
>1023_bases ATGAAGATGAAAAGCATCATCGGCTGTCTATTGGGCCTGGGCATTGCCTCTGGTCTCTCCGGCTGCGCACATACCGTGGA AGTCGGCTCATTCAAAGAGTCCGAGCTGGACCGGAAAGTGGCAGAGACCCTCCCGCCCCAGCATGTCATTGACAAGAAGC AGCCCAAGGTGGCCATACTGCCGCTCGGCGAGCCCCCCGAATATGCCGGTCGTCTGAGTCCCGGCGCGCAGGAGGGGATT ACCCAGATTGCCGCGAAAGGCTGCGGCATGGAGGTGGTTGAACGCAGCCAGGCGCAGAGGATTTTTGACGAAAAGAAATT TGTCTGGTCGCTGGATCTGAGTGCCGATTTCTCTGAAATCAGAAGTATGGTCAACGGCATTGACTATATCGTGCTTGGTT CAATAACCAACCCGGCCACCGGCGCAAAGTTTACCCCGAGCCAGACCAGCTGTGACAGCAAAGGAAAATGCAGCACCTCA AAACCATCCTGCACGGTCAAAGGTTCCGCCACGGTCAATATCAGGGTGATCCAGGCCTCAACAGGCTCGGTGGCCCAGGC GTTTGAACCGTTTACCGGCAGCGTCAGCAACTCCTTTGCGGTGACCGCACAGTATGCCTGCCGTGTCGGCAACCCGGTAG CCGTGCTGACTCAGGCGGTTGCCAATGCCGTCAGCAAGGCAAAAAGGCCGCTGATTGAGGCGTTTCCCCGCTACGGTTAC CTCTACCGGACCATGACCGCTTCTGACGGCAGACGGATCGCCTACGTCAATCTTGGCAGGCTTGACGGGGTTAAGGGTGG CGATGATGTCGAGCTGATCCGCTACACAAAAGAGGTCGATCGAGTCAAAAAAGTCGAACGGCTCACAAACCAGAAGATTG CCGATGTGAAAATTGCGGATACGGACCTGCAAAATGACCGGAGCATTATCATCATCCCGGAAGAGTATTCCTCCCTGGTC ATGCCCGGACTGGCCGTCAAAACCAAATACAACAGCAACTTTTTTGGCGGCCTGTTTGAGTGA
Upstream 100 bases:
>100_bases CCAAAAAACTGAAGGCAGTGCTACTGACCGCTGCCGACTAACCCTCCGGTCCACCGGGCTACACCCGTCCGGGCAGGCTG TACAGGAAAGGTCCGTACGT
Downstream 100 bases:
>100_bases GGCACGGCAGCCCCCCGGTTCTTGACAGCGCCCCTCTTGCTGCATGACGAAAAAAGGCTATACTGAGAAGCATCAGCATT TATCTCAAACAAGGAGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MKMKSIIGCLLGLGIASGLSGCAHTVEVGSFKESELDRKVAETLPPQHVIDKKQPKVAILPLGEPPEYAGRLSPGAQEGI TQIAAKGCGMEVVERSQAQRIFDEKKFVWSLDLSADFSEIRSMVNGIDYIVLGSITNPATGAKFTPSQTSCDSKGKCSTS KPSCTVKGSATVNIRVIQASTGSVAQAFEPFTGSVSNSFAVTAQYACRVGNPVAVLTQAVANAVSKAKRPLIEAFPRYGY LYRTMTASDGRRIAYVNLGRLDGVKGGDDVELIRYTKEVDRVKKVERLTNQKIADVKIADTDLQNDRSIIIIPEEYSSLV MPGLAVKTKYNSNFFGGLFE
Sequences:
>Translated_340_residues MKMKSIIGCLLGLGIASGLSGCAHTVEVGSFKESELDRKVAETLPPQHVIDKKQPKVAILPLGEPPEYAGRLSPGAQEGI TQIAAKGCGMEVVERSQAQRIFDEKKFVWSLDLSADFSEIRSMVNGIDYIVLGSITNPATGAKFTPSQTSCDSKGKCSTS KPSCTVKGSATVNIRVIQASTGSVAQAFEPFTGSVSNSFAVTAQYACRVGNPVAVLTQAVANAVSKAKRPLIEAFPRYGY LYRTMTASDGRRIAYVNLGRLDGVKGGDDVELIRYTKEVDRVKKVERLTNQKIADVKIADTDLQNDRSIIIIPEEYSSLV MPGLAVKTKYNSNFFGGLFE >Mature_340_residues MKMKSIIGCLLGLGIASGLSGCAHTVEVGSFKESELDRKVAETLPPQHVIDKKQPKVAILPLGEPPEYAGRLSPGAQEGI TQIAAKGCGMEVVERSQAQRIFDEKKFVWSLDLSADFSEIRSMVNGIDYIVLGSITNPATGAKFTPSQTSCDSKGKCSTS KPSCTVKGSATVNIRVIQASTGSVAQAFEPFTGSVSNSFAVTAQYACRVGNPVAVLTQAVANAVSKAKRPLIEAFPRYGY LYRTMTASDGRRIAYVNLGRLDGVKGGDDVELIRYTKEVDRVKKVERLTNQKIADVKIADTDLQNDRSIIIIPEEYSSLV MPGLAVKTKYNSNFFGGLFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36615; Mature: 36615
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMKSIIGCLLGLGIASGLSGCAHTVEVGSFKESELDRKVAETLPPQHVIDKKQPKVAIL CCHHHHHHHHHHHHHHHHHCHHHHEEECCCCCHHHHHHHHHHHCCCHHHCCCCCCCEEEE PLGEPPEYAGRLSPGAQEGITQIAAKGCGMEVVERSQAQRIFDEKKFVWSLDLSADFSEI ECCCCHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHH RSMVNGIDYIVLGSITNPATGAKFTPSQTSCDSKGKCSTSKPSCTVKGSATVNIRVIQAS HHHHCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEEEC TGSVAQAFEPFTGSVSNSFAVTAQYACRVGNPVAVLTQAVANAVSKAKRPLIEAFPRYGY CCCHHHHHCCCCCCCCCCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE LYRTMTASDGRRIAYVNLGRLDGVKGGDDVELIRYTKEVDRVKKVERLTNQKIADVKIAD EEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC TDLQNDRSIIIIPEEYSSLVMPGLAVKTKYNSNFFGGLFE CCCCCCCEEEEECCCHHHHHCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure MKMKSIIGCLLGLGIASGLSGCAHTVEVGSFKESELDRKVAETLPPQHVIDKKQPKVAIL CCHHHHHHHHHHHHHHHHHCHHHHEEECCCCCHHHHHHHHHHHCCCHHHCCCCCCCEEEE PLGEPPEYAGRLSPGAQEGITQIAAKGCGMEVVERSQAQRIFDEKKFVWSLDLSADFSEI ECCCCHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHH RSMVNGIDYIVLGSITNPATGAKFTPSQTSCDSKGKCSTSKPSCTVKGSATVNIRVIQAS HHHHCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEEEC TGSVAQAFEPFTGSVSNSFAVTAQYACRVGNPVAVLTQAVANAVSKAKRPLIEAFPRYGY CCCHHHHHCCCCCCCCCCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE LYRTMTASDGRRIAYVNLGRLDGVKGGDDVELIRYTKEVDRVKKVERLTNQKIADVKIAD EEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC TDLQNDRSIIIIPEEYSSLVMPGLAVKTKYNSNFFGGLFE CCCCCCCEEEEECCCHHHHHCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA